MGE detailed information
MGE type: Integron MGE length: 32168 bp
Accession: NZ_CP047995 Location: 1885594..1917761 Organism: Vibrio parahaemolyticus strain 20150710009 Replicon: chromosome
Accession: NZ_CP047995 Location: 1885594..1917761 Organism: Vibrio parahaemolyticus strain 20150710009 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GSS20_RS08490 (GSS20_08970) | 1880890..1881351 | - | 462 | WP_005500350.1 | hypothetical protein | - |
| GSS20_RS08495 (GSS20_08975) | 1881693..1882139 | + | 447 | WP_021449154.1 | DUF3291 domain-containing protein | - |
| GSS20_RS08500 (GSS20_08980) | 1882254..1882457 | + | 204 | WP_025545837.1 | lactoylglutathione lyase | - |
| GSS20_RS08505 (GSS20_08985) | 1882541..1882654 | - | 114 | Protein_1645 | IS481 family transposase | - |
| GSS20_RS08515 (GSS20_08995) | 1883891..1884814 | - | 924 | Protein_1647 | IS481 family transposase | - |
| GSS20_RS08520 (GSS20_09000) | 1885127..1885560 | - | 434 | Protein_1648 | GNAT family N-acetyltransferase | - |
| GSS20_RS08525 (GSS20_09005) | 1885739..1886149 | - | 411 | WP_024701711.1 | hypothetical protein | - |
| GSS20_RS08530 (GSS20_09010) | 1886230..1887120 | - | 891 | WP_005485669.1 | hypothetical protein | - |
| GSS20_RS08535 (GSS20_09020) | 1887731..1888531 | - | 801 | WP_086482363.1 | IS3 family transposase ISDpr3 | Transposase |
| GSS20_RS08540 (GSS20_09025) | 1888528..1888836 | - | 309 | WP_005464425.1 | IS3 family transposase ISNisp1 | Transposase |
| GSS20_RS08545 (GSS20_09030) | 1889053..1889322 | - | 270 | WP_005464459.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| GSS20_RS08550 (GSS20_09035) | 1889315..1889569 | - | 255 | WP_005483180.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| GSS20_RS08555 (GSS20_09040) | 1889793..1890059 | - | 267 | WP_005464625.1 | hypothetical protein | - |
| GSS20_RS08560 (GSS20_09045) | 1890347..1890502 | - | 156 | Protein_1656 | SDR family oxidoreductase | - |
| GSS20_RS08565 (GSS20_09050) | 1890569..1891719 | + | 1151 | WP_102978303.1 | IS3 family transposase ISAbo1 | Transposase |
| GSS20_RS08570 | 1891732..1892040 | - | 309 | WP_025630903.1 | hypothetical protein | - |
| GSS20_RS08575 (GSS20_09060) | 1892425..1892517 | - | 93 | WP_078532240.1 | DUF3265 domain-containing protein | - |
| GSS20_RS08580 (GSS20_09065) | 1892540..1892956 | - | 417 | WP_025507116.1 | hypothetical protein | - |
| GSS20_RS08585 (GSS20_09070) | 1893093..1893581 | - | 489 | WP_031846174.1 | hypothetical protein | - |
| GSS20_RS08590 (GSS20_09075) | 1893710..1894492 | - | 783 | WP_198421245.1 | restriction endonuclease | - |
| GSS20_RS08595 (GSS20_09080) | 1894711..1894791 | - | 81 | WP_078532227.1 | DUF3265 domain-containing protein | - |
| GSS20_RS08600 (GSS20_09085) | 1894806..1895228 | - | 423 | WP_140392184.1 | hypothetical protein | - |
| GSS20_RS08605 (GSS20_09090) | 1895376..1896260 | - | 885 | WP_031778322.1 | hypothetical protein | - |
| GSS20_RS08610 | 1897261..1897428 | - | 168 | WP_162457647.1 | DUF3265 domain-containing protein | - |
| GSS20_RS08615 (GSS20_09105) | 1897701..1897793 | - | 93 | WP_079386106.1 | DUF3265 domain-containing protein | - |
| GSS20_RS08620 (GSS20_09110) | 1897808..1898365 | - | 558 | WP_029857376.1 | hypothetical protein | - |
| GSS20_RS08625 (GSS20_09115) | 1898392..1898484 | - | 93 | WP_072612521.1 | DUF3265 domain-containing protein | - |
| GSS20_RS08630 | 1898952..1899064 | - | 113 | Protein_1670 | DUF3265 domain-containing protein | - |
| GSS20_RS08635 (GSS20_09125) | 1899606..1899890 | + | 285 | WP_031846598.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| GSS20_RS08640 (GSS20_09130) | 1899887..1900165 | + | 279 | WP_031846599.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| GSS20_RS08645 (GSS20_09135) | 1900194..1900286 | - | 93 | WP_079766442.1 | DUF3265 domain-containing protein | - |
| GSS20_RS08650 (GSS20_09140) | 1900301..1900654 | - | 354 | WP_031829440.1 | hypothetical protein | - |
| GSS20_RS08655 (GSS20_09150) | 1900827..1901582 | - | 756 | WP_006741457.1 | DUF3944 domain-containing protein | - |
| GSS20_RS08660 (GSS20_09155) | 1901804..1903423 | - | 1620 | WP_228846245.1 | DUF4263 domain-containing protein | - |
| GSS20_RS08665 (GSS20_09160) | 1903589..1903855 | - | 267 | WP_025527397.1 | barstar family protein | - |
| GSS20_RS08670 (GSS20_09165) | 1904058..1904564 | + | 507 | WP_062905969.1 | hypothetical protein | - |
| GSS20_RS08675 (GSS20_09170) | 1904716..1904934 | - | 219 | WP_031778385.1 | DUF6500 family protein | - |
| GSS20_RS08680 (GSS20_09180) | 1905165..1905908 | - | 744 | WP_031778386.1 | hypothetical protein | - |
| GSS20_RS08685 (GSS20_09185) | 1906064..1906378 | - | 315 | WP_230732088.1 | glyoxalase | - |
| GSS20_RS08690 (GSS20_09190) | 1906815..1907054 | + | 240 | WP_140120383.1 | hypothetical protein | - |
| GSS20_RS08695 | 1907066..1907203 | - | 138 | WP_162457650.1 | hypothetical protein | - |
| GSS20_RS08700 (GSS20_09195) | 1907418..1907951 | - | 534 | WP_005535745.1 | cysteine hydrolase family protein | - |
| GSS20_RS08705 (GSS20_09200) | 1907981..1908073 | - | 93 | WP_072886081.1 | DUF3265 domain-containing protein | - |
| GSS20_RS08710 (GSS20_09205) | 1908436..1908528 | - | 93 | WP_131170497.1 | DUF3265 domain-containing protein | - |
| GSS20_RS08715 (GSS20_09210) | 1908556..1909023 | - | 468 | WP_140392246.1 | hypothetical protein | - |
| GSS20_RS08720 (GSS20_09215) | 1909052..1909144 | - | 93 | WP_078555041.1 | DUF3265 domain-containing protein | - |
| GSS20_RS08725 (GSS20_09220) | 1909159..1909818 | - | 660 | WP_140392205.1 | hypothetical protein | - |
| GSS20_RS08730 (GSS20_09230) | 1910941..1911033 | - | 93 | Protein_1690 | DUF3265 domain-containing protein | - |
| GSS20_RS08735 (GSS20_09235) | 1911048..1911827 | - | 780 | WP_140392204.1 | DUF4393 domain-containing protein | - |
| GSS20_RS08740 | 1911912..1911974 | - | 63 | Protein_1692 | DUF3265 domain-containing protein | - |
| GSS20_RS08745 (GSS20_09240) | 1911965..1912240 | - | 276 | WP_140392203.1 | hypothetical protein | - |
| GSS20_RS08750 (GSS20_09245) | 1912269..1912361 | - | 93 | WP_072617168.1 | DUF3265 domain-containing protein | - |
| GSS20_RS08755 (GSS20_09250) | 1912384..1913610 | - | 1227 | WP_237305175.1 | hypothetical protein | - |
| GSS20_RS08760 (GSS20_09255) | 1914270..1914623 | - | 354 | WP_069523537.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| GSS20_RS08765 (GSS20_09260) | 1914771..1915349 | - | 579 | WP_072615102.1 | SEC-C metal-binding domain-containing protein | - |
| GSS20_RS08770 (GSS20_09265) | 1915388..1915510 | - | 123 | WP_080258921.1 | DUF3265 domain-containing protein | - |
| GSS20_RS08775 (GSS20_09270) | 1915511..1916032 | - | 522 | WP_025611499.1 | GNAT family N-acetyltransferase | - |
| GSS20_RS08780 (GSS20_09275) | 1916060..1916152 | - | 93 | WP_005445235.1 | DUF3265 domain-containing protein | - |
| GSS20_RS08785 (GSS20_09280) | 1916182..1916811 | - | 630 | WP_140392187.1 | DUF4263 domain-containing protein | - |
| GSS20_RS08790 (GSS20_09285) | 1916811..1917077 | - | 267 | WP_140392188.1 | hypothetical protein | - |
| GSS20_RS08795 (GSS20_09290) | 1917158..1917280 | - | 123 | WP_140392189.1 | DUF3265 domain-containing protein | - |
| GSS20_RS08800 (GSS20_09300) | 1918133..1918224 | - | 92 | Protein_1704 | DUF3265 domain-containing protein | - |
| GSS20_RS08805 (GSS20_09305) | 1918239..1918910 | - | 672 | WP_140391837.1 | hypothetical protein | - |
| GSS20_RS08810 | 1919208..1919510 | - | 303 | WP_229626457.1 | NAD(P)H-dependent oxidoreductase | - |
| GSS20_RS08815 (GSS20_09315) | 1919779..1921395 | - | 1617 | WP_157629957.1 | hypothetical protein | - |
| GSS20_RS08820 (GSS20_09320) | 1922161..1922559 | - | 399 | WP_140392209.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|