MGE detailed information
MGE type: Prophage MGE length: 62244 bp
Accession: NZ_CP047851 Location: 1551826..1614069 Organism: Staphylococcus aureus strain UP_338 Replicon: chromosome
Accession: NZ_CP047851 Location: 1551826..1614069 Organism: Staphylococcus aureus strain UP_338 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S74_RS07300 () | 1547257..1548210 | - | 954 | WP_001163814.1 | helix-turn-helix domain-containing protein | - |
| E3S74_RS07305 () | 1548318..1548566 | + | 249 | WP_001151997.1 | ferredoxin | - |
| E3S74_RS07310 () | 1548672..1549217 | - | 546 | WP_001186908.1 | ECF transporter S component | - |
| E3S74_RS07315 () | 1549496..1549660 | - | 165 | WP_001799520.1 | hypothetical protein | - |
| E3S74_RS07320 () | 1549865..1550773 | - | 909 | WP_000476878.1 | DUF1672 domain-containing protein | - |
| E3S74_RS07325 () | 1550831..1551736 | - | 906 | WP_000913238.1 | DUF1672 domain-containing protein | - |
| E3S74_RS13835 () | 1551826..1552041 | - | 216 | WP_170267452.1 | hypothetical protein | - |
| E3S74_RS07335 () | 1552417..1553253 | - | 837 | WP_000675478.1 | hypothetical protein | - |
| E3S74_RS07340 () | 1553869..1555323 | - | 1455 | WP_000909210.1 | N-acetylmuramoyl-L-alanine amidase | - |
| E3S74_RS07345 () | 1555334..1555636 | - | 303 | WP_000339144.1 | phage holin | - |
| E3S74_RS07350 () | 1555772..1556071 | - | 300 | WP_061734471.1 | DUF2951 family protein | - |
| E3S74_RS07355 () | 1556117..1556281 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| E3S74_RS07360 () | 1556274..1556663 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| E3S74_RS07365 () | 1556663..1558129 | - | 1467 | WP_107375223.1 | BppU family phage baseplate upper protein | - |
| E3S74_RS07370 () | 1558129..1560039 | - | 1911 | WP_000429551.1 | minor structural protein | - |
| E3S74_RS07375 () | 1560055..1560345 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| E3S74_RS07380 () | 1560345..1561928 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| E3S74_RS07385 () | 1561937..1562761 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| E3S74_RS07390 () | 1562761..1568961 | - | 6201 | WP_070028375.1 | phage tail tape measure protein | - |
| E3S74_RS07395 () | 1568975..1569133 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| E3S74_RS07400 () | 1569175..1569525 | - | 351 | WP_000589165.1 | hypothetical protein | - |
| E3S74_RS07405 () | 1569544..1570038 | - | 495 | WP_160200236.1 | Ig-like domain-containing protein | - |
| E3S74_RS07410 () | 1570130..1570771 | - | 642 | WP_000807536.1 | tail protein | - |
| E3S74_RS07415 () | 1570806..1571201 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| E3S74_RS07420 () | 1571202..1571603 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| E3S74_RS07425 () | 1571600..1571932 | - | 333 | WP_000395501.1 | hypothetical protein | - |
| E3S74_RS07430 () | 1571944..1572222 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| E3S74_RS07435 () | 1572291..1573454 | - | 1164 | WP_001142739.1 | phage major capsid protein | - |
| E3S74_RS07440 () | 1573466..1574239 | - | 774 | WP_000061872.1 | Clp protease ClpP | - |
| E3S74_RS07445 () | 1574223..1575461 | - | 1239 | WP_001100669.1 | phage portal protein | - |
| E3S74_RS07450 () | 1575466..1577157 | - | 1692 | WP_000153549.1 | terminase large subunit | - |
| E3S74_RS07455 () | 1577147..1577452 | - | 306 | WP_000778930.1 | P27 family phage terminase small subunit | - |
| E3S74_RS07460 () | 1577579..1577893 | - | 315 | WP_000196700.1 | HNH endonuclease | - |
| E3S74_RS07465 () | 1578055..1578492 | - | 438 | WP_053507569.1 | transcriptional regulator | - |
| E3S74_RS07470 () | 1578505..1579872 | - | 1368 | WP_078066162.1 | DEAD/DEAH box helicase | - |
| E3S74_RS07475 () | 1579853..1580143 | - | 291 | WP_000665204.1 | VRR-NUC domain-containing protein | - |
| E3S74_RS07480 () | 1580277..1580381 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| E3S74_RS07485 () | 1580484..1582931 | - | 2448 | WP_107375224.1 | virulence-associated E family protein | - |
| E3S74_RS07490 () | 1582983..1583183 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| E3S74_RS07495 () | 1583251..1583403 | - | 153 | WP_000595237.1 | transcriptional activator RinB | - |
| E3S74_RS07500 () | 1583396..1583632 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| E3S74_RS07505 () | 1583657..1583893 | - | 237 | WP_000195831.1 | DUF1381 domain-containing protein | - |
| E3S74_RS07510 () | 1583930..1584466 | - | 537 | WP_160200237.1 | dUTPase | - |
| E3S74_RS07515 () | 1584459..1584707 | - | 249 | WP_107375226.1 | DUF1024 family protein | - |
| E3S74_RS07520 () | 1584722..1584964 | - | 243 | WP_000131377.1 | phi PVL orf 51-like protein | - |
| E3S74_RS07525 () | 1584968..1585336 | - | 369 | WP_031897611.1 | phage protein | - |
| E3S74_RS13840 () | 1585337..1585522 | - | 186 | WP_001187241.1 | DUF3113 family protein | - |
| E3S74_RS07530 () | 1585522..1585677 | - | 156 | WP_000152769.1 | hypothetical protein | - |
| E3S74_RS07535 () | 1585689..1587641 | - | 1953 | WP_107375269.1 | DNA polymerase | - |
| E3S74_RS07540 () | 1587709..1588266 | - | 558 | WP_000645048.1 | DUF2815 family protein | - |
| E3S74_RS07545 () | 1588292..1589458 | - | 1167 | WP_031834538.1 | DUF2800 domain-containing protein | - |
| E3S74_RS07550 () | 1589455..1589817 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| E3S74_RS07555 () | 1589832..1590155 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| E3S74_RS07560 () | 1590234..1590395 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| E3S74_RS07565 () | 1590408..1590671 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| E3S74_RS07570 () | 1590696..1590911 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| E3S74_RS07575 () | 1590966..1591331 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| E3S74_RS07580 () | 1591300..1591545 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| E3S74_RS07585 () | 1591574..1592350 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| E3S74_RS07590 () | 1592364..1592600 | - | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| E3S74_RS07595 () | 1592752..1593066 | + | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| E3S74_RS07600 () | 1593079..1593540 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| E3S74_RS07605 () | 1593558..1594142 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| E3S74_RS07610 () | 1594481..1595104 | - | 624 | WP_001166482.1 | hypothetical protein | - |
| E3S74_RS07615 () | 1595214..1596419 | + | 1206 | WP_000264191.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| E3S74_RS07620 () | 1596462..1598504 | - | 2043 | WP_001794062.1 | hypothetical protein | - |
| E3S74_RS07625 () | 1598491..1599423 | - | 933 | WP_001574168.1 | DUF1672 domain-containing protein | - |
| E3S74_RS07630 () | 1599675..1601426 | - | 1752 | WP_000987777.1 | two-component system sensor histidine kinase SrrB | - |
| E3S74_RS07635 () | 1601407..1602132 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| E3S74_RS07640 () | 1602265..1603002 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| E3S74_RS07645 () | 1602995..1603537 | - | 543 | WP_000368652.1 | SMC-Scp complex subunit ScpB | - |
| E3S74_RS07650 () | 1603530..1604261 | - | 732 | WP_000273367.1 | segregation/condensation protein A | - |
| E3S74_RS07655 () | 1604353..1604859 | + | 507 | WP_001183424.1 | DUF309 domain-containing protein | - |
| E3S74_RS07660 () | 1604937..1605824 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E3S74_RS07665 () | 1605873..1606322 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| E3S74_RS07670 () | 1606427..1606969 | - | 543 | WP_000365236.1 | NUDIX hydrolase | - |
| E3S74_RS07675 () | 1607051..1607959 | + | 909 | WP_001171333.1 | aldo/keto reductase | - |
| E3S74_RS07680 () | 1608175..1608423 | - | 249 | WP_000995806.1 | hypothetical protein | - |
| E3S74_RS07685 () | 1608439..1609194 | - | 756 | WP_000678227.1 | SDR family oxidoreductase | - |
| E3S74_RS07690 () | 1609336..1610151 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| E3S74_RS07695 () | 1610256..1611176 | - | 921 | WP_000454059.1 | ribonuclease Z | - |
| E3S74_RS07700 () | 1611489..1612973 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| E3S74_RS07705 () | 1613203..1614069 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| E3S74_RS07710 () | 1614152..1615801 | - | 1650 | WP_001041925.1 | alpha-glucosidase | - |
| E3S74_RS07715 () | 1615817..1616836 | - | 1020 | WP_000256335.1 | LacI family DNA-binding transcriptional regulator | - |
| E3S74_RS07720 () | 1616837..1617091 | - | 255 | WP_001791204.1 | hypothetical protein | - |
| E3S74_RS07725 () | 1617030..1617401 | - | 372 | WP_000413432.1 | VOC family protein | - |
| E3S74_RS13845 () | 1617645..1617806 | + | 162 | Protein_1521 | ISL3 family transposase | - |
| E3S74_RS07730 () | 1617878..1618777 | - | 900 | WP_000798481.1 | carbohydrate kinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|