MGE detailed information
MGE type: Prophage MGE length: 93918 bp
Accession: NZ_CP047790 Location: 126449..220366 Organism: Staphylococcus aureus strain UP_830 Replicon: chromosome
Accession: NZ_CP047790 Location: 126449..220366 Organism: Staphylococcus aureus strain UP_830 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S90_RS00775 () | 123686..124747 | + | 1062 | WP_000063582.1 | PTS transporter subunit IIC | - |
| E3S90_RS00780 () | 125005..126462 | + | 1458 | WP_000649907.1 | ABC transporter permease subunit | - |
| E3S90_RS00785 () | 126455..127177 | + | 723 | WP_000590809.1 | hypothetical protein | VF |
| E3S90_RS00790 () | 127328..128455 | + | 1128 | WP_029160281.1 | tRNA epoxyqueuosine(34) reductase QueG | - |
| E3S90_RS00795 () | 128460..128930 | + | 471 | WP_000181394.1 | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | - |
| E3S90_RS00800 () | 129088..129687 | + | 600 | WP_001251229.1 | glucosamine-6-phosphate isomerase | Antitoxin Detail |
| E3S90_RS00805 () | 129712..129864 | + | 153 | WP_000031108.1 | hypothetical protein | Toxin Detail |
| E3S90_RS00810 () | 130698..131093 | + | 396 | WP_000901023.1 | hypothetical protein | - |
| E3S90_RS00815 () | 131289..132674 | + | 1386 | WP_000116231.1 | class II fumarate hydratase | - |
| E3S90_RS00820 () | 133127..133948 | - | 822 | WP_000669376.1 | RluA family pseudouridine synthase | - |
| E3S90_RS00825 () | 134111..135223 | + | 1113 | WP_000437968.1 | GAF domain-containing sensor histidine kinase | - |
| E3S90_RS00830 () | 135245..135868 | + | 624 | WP_001045133.1 | hypothetical protein | VF |
| E3S90_RS00835 () | 136224..136688 | + | 465 | WP_000375864.1 | helix-turn-helix transcriptional regulator | - |
| E3S90_RS00840 () | 136867..137991 | + | 1125 | WP_064127899.1 | DUF445 domain-containing protein | - |
| E3S90_RS00845 () | 138060..138404 | + | 345 | WP_000290301.1 | YlbF/YmcA family competence regulator | - |
| E3S90_RS00850 () | 138897..138995 | + | 99 | WP_001802255.1 | hypothetical protein | - |
| E3S90_RS00855 () | 139286..140482 | + | 1197 | WP_000238230.1 | exonuclease SbcCD subunit D | - |
| E3S90_RS00860 () | 140472..143408 | + | 2937 | WP_000584638.1 | AAA family ATPase | - |
| E3S90_RS00865 () | 143405..144346 | + | 942 | WP_001244175.1 | 3'-5' exoribonuclease YhaM | - |
| E3S90_RS00870 () | 144467..145429 | - | 963 | WP_000782127.1 | hypothetical protein | VF |
| E3S90_RS00875 () | 145634..146191 | - | 558 | WP_160194975.1 | DUF3267 domain-containing protein | - |
| E3S90_RS00880 () | 146924..147289 | - | 366 | WP_000648118.1 | YtxH domain-containing protein | - |
| E3S90_RS00885 () | 147431..147853 | - | 423 | WP_000004981.1 | HIT family protein | - |
| E3S90_RS00890 () | 147987..148727 | + | 741 | WP_000216873.1 | hypothetical protein | VF |
| E3S90_RS00895 () | 148720..149943 | + | 1224 | WP_000551840.1 | ABC transporter permease | - |
| E3S90_RS00900 () | 150067..150570 | - | 504 | WP_160194976.1 | signal transduction protein TRAP | - |
| E3S90_RS00905 () | 150733..150843 | + | 111 | WP_001790154.1 | hypothetical protein | - |
| E3S90_RS00910 () | 150833..151870 | + | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| E3S90_RS00915 () | 151928..152851 | + | 924 | WP_000162881.1 | ferrochelatase | - |
| E3S90_RS00920 () | 152875..154275 | + | 1401 | WP_000167545.1 | protoporphyrinogen oxidase | - |
| E3S90_RS00925 () | 154596..155150 | + | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| E3S90_RS00970 () | 156501..157283 | + | 783 | WP_129409671.1 | hypothetical protein | VF |
| E3S90_RS00975 () | 157564..158283 | + | 720 | WP_000821658.1 | hypothetical protein | VF |
| E3S90_RS00980 () | 158318..159046 | + | 729 | WP_000713847.1 | hypothetical protein | VF |
| E3S90_RS00985 () | 159200..159970 | + | 771 | WP_000764689.1 | hypothetical protein | VF |
| E3S90_RS00990 () | 160009..160764 | + | 756 | WP_001236364.1 | hypothetical protein | VF |
| E3S90_RS00995 () | 161047..161823 | + | 777 | WP_000736710.1 | hypothetical protein | VF |
| E3S90_RS01000 () | 162375..163151 | - | 777 | WP_000848315.1 | DUF1828 domain-containing protein | - |
| E3S90_RS01005 () | 163172..163408 | - | 237 | WP_000617704.1 | hypothetical protein | - |
| E3S90_RS01010 () | 163486..163980 | - | 495 | WP_001253432.1 | hypothetical protein | - |
| E3S90_RS01015 () | 164508..164636 | - | 129 | WP_001792814.1 | IS3 family transposase | - |
| E3S90_RS01020 () | 164814..165602 | - | 789 | WP_000209099.1 | DUF1828 domain-containing protein | - |
| E3S90_RS13585 () | 165639..166069 | - | 431 | Protein_165 | hypothetical protein | - |
| E3S90_RS01025 () | 166966..167901 | + | 936 | WP_000473596.1 | hypothetical protein | VF |
| E3S90_RS01030 () | 167903..168886 | + | 984 | WP_000782463.1 | hypothetical protein | VF |
| E3S90_RS01035 () | 169257..170048 | - | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| E3S90_RS01040 () | 170053..170526 | - | 474 | WP_000550252.1 | hypothetical protein | - |
| E3S90_RS01045 () | 170712..171000 | + | 289 | Protein_170 | BsaG protein | - |
| E3S90_RS01050 () | 171474..172052 | - | 579 | WP_001092759.1 | DUF4888 domain-containing protein | - |
| E3S90_RS01055 () | 173017..173724 | + | 708 | WP_001039432.1 | hypothetical protein | VF |
| E3S90_RS01060 () | 173849..174571 | + | 723 | WP_001039444.1 | hypothetical protein | VF |
| E3S90_RS01065 () | 174629..175348 | + | 720 | WP_001038867.1 | hypothetical protein | VF |
| E3S90_RS01070 () | 175469..176188 | + | 720 | WP_001038706.1 | hypothetical protein | VF |
| E3S90_RS01075 () | 176137..176244 | - | 108 | WP_011447030.1 | hypothetical protein | - |
| E3S90_RS01080 () | 176346..177062 | + | 717 | WP_160194977.1 | hypothetical protein | VF |
| E3S90_RS01085 () | 177213..177932 | + | 720 | WP_001038713.1 | hypothetical protein | VF |
| E3S90_RS01090 () | 177997..178131 | + | 135 | WP_001791797.1 | hypothetical protein | - |
| E3S90_RS01095 () | 178295..179851 | + | 1557 | WP_201747849.1 | type I restriction-modification system subunit M | - |
| E3S90_RS01100 () | 179844..180962 | + | 1119 | WP_000072558.1 | restriction endonuclease subunit S | - |
| E3S90_RS01105 () | 181610..182026 | + | 417 | WP_020978241.1 | DUF1433 domain-containing protein | - |
| E3S90_RS01110 () | 182263..182610 | + | 348 | WP_001566695.1 | DUF1433 domain-containing protein | - |
| E3S90_RS01115 () | 182632..183006 | + | 375 | WP_000695818.1 | DUF1433 domain-containing protein | - |
| E3S90_RS01120 () | 183194..183376 | + | 183 | Protein_185 | transposase | - |
| E3S90_RS01125 () | 183354..183455 | - | 102 | WP_001791232.1 | hypothetical protein | - |
| - () | 183493..183550 | + | 58 | - | - | Antitoxin Detail |
| E3S90_RS01130 () | 183578..183673 | - | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| E3S90_RS01135 () | 184124..184570 | + | 447 | WP_000747802.1 | DUF1433 domain-containing protein | - |
| E3S90_RS01140 () | 185255..185638 | + | 384 | WP_000070811.1 | hypothetical protein | - |
| E3S90_RS01145 () | 185649..185825 | + | 177 | WP_000375476.1 | hypothetical protein | - |
| E3S90_RS01155 () | 186196..186753 | + | 558 | WP_000864139.1 | ImmA/IrrE family metallo-endopeptidase | - |
| E3S90_RS01160 () | 186951..187523 | - | 573 | WP_000414206.1 | hypothetical protein | - |
| E3S90_RS01165 () | 187624..187965 | - | 342 | WP_000627547.1 | DUF3969 family protein | - |
| E3S90_RS01170 () | 188006..188632 | - | 627 | WP_000669021.1 | hypothetical protein | - |
| E3S90_RS01175 () | 188706..189701 | - | 996 | WP_000070648.1 | DUF4352 domain-containing protein | - |
| E3S90_RS01180 () | 189782..190432 | - | 651 | WP_001789021.1 | excalibur calcium-binding domain-containing protein | - |
| E3S90_RS01185 () | 190735..191190 | + | 456 | WP_072460539.1 | DUF4909 domain-containing protein | - |
| E3S90_RS01190 () | 191349..192827 | + | 1479 | WP_000348363.1 | o-succinylbenzoate--CoA ligase | - |
| E3S90_RS01195 () | 192832..193833 | + | 1002 | WP_000778537.1 | o-succinylbenzoate synthase | - |
| E3S90_RS01200 () | 193830..194087 | - | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| E3S90_RS01205 () | 194153..194626 | + | 474 | WP_000672015.1 | nucleoside triphosphatase YtkD | - |
| E3S90_RS01210 () | 194631..195377 | + | 747 | WP_072384924.1 | S9 family peptidase | - |
| E3S90_RS01215 () | 195630..197222 | - | 1593 | WP_000109906.1 | phosphoenolpyruvate carboxykinase (ATP) | - |
| E3S90_RS01220 () | 197594..198787 | + | 1194 | WP_000933822.1 | methionine adenosyltransferase | - |
| E3S90_RS01225 () | 198912..199820 | + | 909 | WP_000366163.1 | NERD domain-containing protein | - |
| E3S90_RS01230 () | 200032..200865 | + | 834 | WP_000453317.1 | aldo/keto reductase | - |
| E3S90_RS01235 () | 200928..202463 | - | 1536 | Protein_207 | IS1182 family transposase | - |
| E3S90_RS01240 () | 202863..203216 | - | 354 | WP_000623477.1 | CrcB family protein | - |
| E3S90_RS01245 () | 203213..203578 | - | 366 | WP_001200542.1 | fluoride efflux transporter CrcB | - |
| E3S90_RS01250 () | 203834..204136 | - | 303 | WP_000091445.1 | hypothetical protein | - |
| E3S90_RS01255 () | 204396..205109 | + | 714 | WP_001096494.1 | transaldolase | - |
| E3S90_RS01260 () | 205549..206184 | - | 636 | WP_001168907.1 | CPBP family intramembrane metalloprotease SdpA | - |
| E3S90_RS01265 () | 206480..206923 | + | 444 | WP_001030469.1 | hypothetical protein | - |
| E3S90_RS01270 () | 206910..207353 | - | 444 | WP_001153742.1 | competence protein ComK | - |
| E3S90_RS01275 () | 207466..207936 | - | 471 | WP_000671052.1 | RNA polymerase sigma factor SigS | - |
| E3S90_RS01280 () | 208135..208359 | + | 225 | WP_000384171.1 | hypothetical protein | - |
| E3S90_RS01285 () | 208635..209489 | + | 855 | WP_001032833.1 | N-acetylglucosaminidase | - |
| E3S90_RS01290 () | 209576..210868 | - | 1293 | WP_000989121.1 | arsenite efflux transporter membrane subunit ArsB | - |
| E3S90_RS01295 () | 210868..211182 | - | 315 | WP_000221177.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| E3S90_RS01300 () | 211705..213207 | + | 1503 | WP_001261668.1 | FAD/NAD(P)-binding domain-containing protein | - |
| E3S90_RS01305 () | 213688..214731 | + | 1044 | WP_000077358.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| E3S90_RS01310 () | 214738..215370 | + | 633 | WP_000493892.1 | riboflavin synthase | - |
| E3S90_RS01315 () | 215381..216562 | + | 1182 | WP_001159022.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| E3S90_RS01320 () | 216575..217039 | + | 465 | WP_001008551.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| E3S90_RS01325 () | 217161..218162 | - | 1002 | WP_001196354.1 | proline dehydrogenase | - |
| E3S90_RS01330 () | 218274..218393 | + | 120 | WP_001790712.1 | hypothetical protein | - |
| E3S90_RS01335 () | 218396..219223 | + | 828 | WP_000266096.1 | alpha/beta hydrolase | - |
| E3S90_RS01340 () | 219570..220231 | + | 662 | Protein_228 | IS1182 family transposase ISSau3 | Transposase |
| E3S90_RS01345 () | 220803..221204 | + | 402 | WP_000757543.1 | MarR family transcriptional regulator | - |
| E3S90_RS01350 () | 221324..221887 | - | 564 | WP_000764419.1 | class I SAM-dependent methyltransferase | - |
| E3S90_RS01355 () | 221884..222837 | - | 954 | WP_000526538.1 | TIGR01212 family radical SAM protein | - |
| E3S90_RS01360 () | 222947..224128 | + | 1182 | WP_001025061.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|