MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 90674 bp
Accession: NZ_CP047663 Location: 1..90674 Organism: Escherichia coli strain LD93-1 Replicon: plasmid pLD93-1-90kb
Accession: NZ_CP047663 Location: 1..90674 Organism: Escherichia coli strain LD93-1 Replicon: plasmid pLD93-1-90kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GUU84_RS22690 () | 489..974 | + | 486 | WP_001273800.1 | TIGR02594 family protein | - |
| GUU84_RS22695 () | 1007..1204 | - | 198 | WP_094313941.1 | hypothetical protein | - |
| GUU84_RS22700 () | 1204..1911 | - | 708 | WP_094313942.1 | Rha family transcriptional regulator | - |
| GUU84_RS22705 () | 1911..2135 | - | 225 | WP_001436278.1 | host cell division inhibitor Icd-like protein | - |
| GUU84_RS22715 () | 2550..3512 | - | 963 | WP_160188285.1 | lytic replication protein | - |
| GUU84_RS22720 () | 3713..4711 | - | 999 | WP_032342280.1 | hypothetical protein | - |
| GUU84_RS22725 () | 4725..6407 | - | 1683 | WP_000201469.1 | hypothetical protein | - |
| GUU84_RS22735 () | 6492..6824 | - | 333 | WP_088491974.1 | hypothetical protein | - |
| GUU84_RS22740 () | 6869..7426 | - | 558 | WP_052936022.1 | DUF4145 domain-containing protein | - |
| GUU84_RS22745 () | 7552..8916 | - | 1365 | WP_088491973.1 | hypothetical protein | - |
| GUU84_RS22750 () | 9010..9378 | - | 369 | WP_021551757.1 | hypothetical protein | - |
| GUU84_RS22755 () | 9378..11303 | - | 1926 | WP_160188286.1 | head protein | - |
| GUU84_RS22760 () | 11296..11916 | - | 621 | WP_000066532.1 | hypothetical protein | - |
| GUU84_RS22765 () | 11906..12352 | - | 447 | WP_000526264.1 | hypothetical protein | - |
| GUU84_RS22770 () | 12352..12678 | - | 327 | WP_000457140.1 | holin | - |
| GUU84_RS22775 () | 12784..13344 | + | 561 | WP_052936025.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| GUU84_RS22780 () | 13614..14456 | + | 843 | WP_052936030.1 | phage tail protein | - |
| GUU84_RS22785 () | 14458..14985 | + | 528 | WP_032164659.1 | tail fiber assembly protein | - |
| GUU84_RS22790 () | 15014..15547 | - | 534 | WP_052936026.1 | tail fiber assembly protein | - |
| GUU84_RS22795 () | 15550..18789 | - | 3240 | WP_160188287.1 | tail fiber protein | - |
| GUU84_RS23555 () | 18792..19238 | - | 447 | WP_198098746.1 | phage tail protein | - |
| GUU84_RS22805 () | 19333..20178 | - | 846 | WP_160188288.1 | phage tail protein | - |
| GUU84_RS22810 () | 20189..21619 | - | 1431 | WP_160188289.1 | baseplate protein | - |
| GUU84_RS22815 () | 21616..21990 | - | 375 | WP_104076000.1 | hypothetical protein | - |
| GUU84_RS22820 () | 21996..25787 | - | 3792 | WP_160188290.1 | transglycosylase | - |
| GUU84_RS22825 () | 25802..26623 | - | 822 | WP_160188291.1 | hypothetical protein | - |
| GUU84_RS22830 () | 27012..27767 | + | 756 | WP_001077897.1 | RepB family plasmid replication initiator protein | - |
| GUU84_RS22835 () | 28149..28856 | - | 708 | WP_000021878.1 | hypothetical protein | - |
| GUU84_RS22840 () | 28872..29423 | - | 552 | WP_000187854.1 | hypothetical protein | - |
| GUU84_RS22845 () | 29478..29969 | - | 492 | WP_000012433.1 | hypothetical protein | - |
| GUU84_RS22850 () | 29978..30550 | - | 573 | WP_001112721.1 | hypothetical protein | - |
| GUU84_RS22855 () | 30618..31352 | - | 735 | WP_000801017.1 | hypothetical protein | - |
| GUU84_RS22860 () | 31397..33055 | - | 1659 | WP_160188292.1 | phage tail protein | - |
| GUU84_RS22865 () | 33123..33401 | - | 279 | WP_001396841.1 | Ig-like domain-containing protein | - |
| GUU84_RS22870 () | 33549..35246 | - | 1698 | WP_001038834.1 | hypothetical protein | - |
| GUU84_RS22875 () | 35405..35797 | + | 393 | WP_000331486.1 | hypothetical protein | - |
| GUU84_RS22880 () | 35814..36272 | + | 459 | WP_000020025.1 | hypothetical protein | - |
| GUU84_RS22885 () | 36426..36884 | - | 459 | WP_160188293.1 | hypothetical protein | - |
| GUU84_RS22890 () | 36955..37761 | - | 807 | WP_063112311.1 | hypothetical protein | - |
| GUU84_RS22895 () | 37761..38045 | - | 285 | WP_001272821.1 | alanine racemase | - |
| GUU84_RS22900 () | 38312..39268 | + | 957 | WP_032284705.1 | recombinase | - |
| GUU84_RS22905 () | 39282..39620 | + | 339 | WP_000076909.1 | plasmid stabilization protein | - |
| GUU84_RS22910 () | 39908..40549 | + | 642 | WP_016262372.1 | Chromosome-partitioning ATPase Soj | VF |
| GUU84_RS22915 () | 40542..40829 | + | 288 | WP_032284706.1 | hypothetical protein | - |
| GUU84_RS22920 () | 41098..42759 | + | 1662 | WP_032342063.1 | glutamine--tRNA ligase | - |
| GUU84_RS22925 () | 42808..43713 | - | 906 | WP_032342062.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| GUU84_RS22930 () | 43706..44386 | - | 681 | WP_000812238.1 | hypothetical protein | - |
| GUU84_RS22935 () | 44370..45275 | - | 906 | WP_032342061.1 | recombination-associated protein RdgC | - |
| GUU84_RS22940 () | 45335..45988 | - | 654 | WP_032342060.1 | hypothetical protein | - |
| GUU84_RS22945 () | 45985..46965 | - | 981 | WP_000046500.1 | hypothetical protein | - |
| GUU84_RS22950 () | 46969..47736 | - | 768 | WP_000203292.1 | hypothetical protein | - |
| GUU84_RS22955 () | 47733..48524 | - | 792 | WP_109157910.1 | phage tail protein | - |
| GUU84_RS22960 () | 48687..48989 | + | 303 | WP_000162415.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GUU84_RS22965 () | 49060..49398 | + | 339 | WP_000806445.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| GUU84_RS22975 () | 49677..50405 | + | 729 | WP_023908595.1 | hypothetical protein | - |
| GUU84_RS22980 () | 50439..51632 | - | 1194 | WP_001112629.1 | hypothetical protein | - |
| GUU84_RS22985 () | 51625..51954 | - | 330 | WP_000542383.1 | hypothetical protein | - |
| GUU84_RS22990 () | 52283..52936 | - | 654 | WP_023908597.1 | hypothetical protein | - |
| GUU84_RS22995 () | 53205..54116 | + | 912 | WP_080028516.1 | hypothetical protein | - |
| GUU84_RS23000 () | 54156..54506 | - | 351 | WP_000201621.1 | hypothetical protein | - |
| GUU84_RS23005 () | 54652..54936 | - | 285 | WP_112918136.1 | transcriptional regulator | - |
| GUU84_RS23010 () | 54996..55937 | - | 942 | WP_160188294.1 | Rha family transcriptional regulator | - |
| GUU84_RS23015 () | 55937..56428 | - | 492 | Protein_63 | host cell division inhibitor Icd-like protein | - |
| GUU84_RS23560 () | 56465..56632 | - | 168 | WP_000218499.1 | hypothetical protein | - |
| GUU84_RS23020 () | 56964..57542 | - | 579 | WP_112918135.1 | recombinase | - |
| GUU84_RS23025 () | 57815..58426 | + | 612 | WP_183022158.1 | DUF4406 domain-containing protein | - |
| GUU84_RS23030 () | 58456..58740 | + | 285 | WP_052936027.1 | DNA-binding protein | - |
| GUU84_RS23035 () | 58730..59431 | + | 702 | WP_139523413.1 | ead/Ea22-like family protein | - |
| GUU84_RS23040 () | 59431..59751 | + | 321 | WP_080028519.1 | carboxylate--amine ligase | - |
| GUU84_RS23045 () | 59843..60118 | + | 276 | WP_073714438.1 | DUF4752 family protein | - |
| GUU84_RS23050 () | 60115..60339 | + | 225 | WP_000139733.1 | hypothetical protein | - |
| GUU84_RS23055 () | 60336..60647 | + | 312 | WP_073714439.1 | hypothetical protein | - |
| GUU84_RS23060 () | 60644..61336 | + | 693 | WP_073714440.1 | metallophosphoesterase | - |
| GUU84_RS23065 () | 61434..62429 | + | 996 | WP_080028521.1 | DUF968 domain-containing protein | - |
| GUU84_RS23070 () | 62446..63135 | + | 690 | WP_069067277.1 | hypothetical protein | - |
| GUU84_RS23075 () | 63122..63808 | + | 687 | WP_160188295.1 | ead/Ea22-like family protein | - |
| GUU84_RS23080 () | 63805..64428 | + | 624 | WP_160188296.1 | ead/Ea22-like family protein | - |
| GUU84_RS23085 () | 64601..64789 | + | 189 | WP_000797282.1 | hypothetical protein | - |
| GUU84_RS23090 () | 64791..65000 | + | 210 | WP_000951710.1 | hypothetical protein | - |
| GUU84_RS23095 () | 64997..65698 | + | 702 | WP_074446721.1 | hypothetical protein | - |
| GUU84_RS23100 () | 65682..65966 | + | 285 | WP_001142396.1 | hypothetical protein | - |
| GUU84_RS23105 () | 65951..66160 | - | 210 | WP_001344848.1 | hypothetical protein | - |
| GUU84_RS23110 () | 66334..66585 | + | 252 | WP_032220968.1 | DNA polymerase III subunit theta | - |
| GUU84_RS23115 () | 66684..67073 | + | 390 | WP_088491978.1 | DNA repair protein | - |
| GUU84_RS23120 () | 67146..67367 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GUU84_RS23125 () | 67367..67747 | + | 381 | WP_001216041.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| GUU84_RS23130 () | 67831..68631 | - | 801 | WP_000432093.1 | hypothetical protein | - |
| GUU84_RS23135 () | 68638..69300 | - | 663 | WP_160188297.1 | DUF2829 domain-containing protein | - |
| GUU84_RS23140 () | 69315..69809 | - | 495 | WP_000640903.1 | dUTP diphosphatase | - |
| GUU84_RS23145 () | 69806..70282 | - | 477 | WP_000861173.1 | hypothetical protein | - |
| GUU84_RS23150 () | 70279..70587 | - | 309 | WP_160188298.1 | hypothetical protein | - |
| GUU84_RS23155 () | 70697..71725 | - | 1029 | WP_121334858.1 | tyrosine-type recombinase/integrase | - |
| GUU84_RS23160 () | 72111..73148 | + | 1038 | WP_047647013.1 | hypothetical protein | - |
| GUU84_RS23165 () | 73174..74682 | - | 1509 | WP_047647011.1 | terminase | - |
| GUU84_RS23170 () | 74682..75662 | - | 981 | WP_063074511.1 | hypothetical protein | - |
| GUU84_RS23175 () | 76043..76435 | - | 393 | WP_032342027.1 | hypothetical protein | - |
| GUU84_RS23565 () | 76544..76936 | - | 393 | WP_170929449.1 | hypothetical protein | - |
| GUU84_RS23570 () | 76936..77511 | - | 576 | WP_171763672.1 | hypothetical protein | - |
| GUU84_RS23195 () | 78160..78324 | - | 165 | WP_000579539.1 | DUF3927 family protein | - |
| GUU84_RS23200 () | 78324..78758 | - | 435 | WP_000467090.1 | tellurite resistance TerB family protein | - |
| GUU84_RS23220 () | 80972..82180 | - | 1209 | WP_052896590.1 | hypothetical protein | - |
| GUU84_RS23225 () | 82807..83103 | - | 297 | WP_086252943.1 | VRR-NUC domain-containing protein | - |
| GUU84_RS23230 () | 83438..83698 | - | 261 | WP_080077668.1 | hypothetical protein | - |
| GUU84_RS23235 () | 83701..84135 | - | 435 | WP_000209223.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|