MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 32448 bp
Accession: NZ_CP047612 Location: 1..32448 Organism: Escherichia coli strain NMBU_ W06E18 Replicon: plasmid pNMBU_W06E18_Str1_3
Accession: NZ_CP047612 Location: 1..32448 Organism: Escherichia coli strain NMBU_ W06E18 Replicon: plasmid pNMBU_W06E18_Str1_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GU332_RS25890 () | 520..1638 | + | 1119 | WP_000131266.1 | Type IV secretion system protein virB10 | VF |
| GU332_RS25895 () | 1640..2668 | + | 1029 | WP_000017223.1 | Type IV secretion system protein VirB11 | VF |
| GU332_RS25900 () | 2655..4517 | + | 1863 | WP_000847105.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GU332_RS25905 () | 4529..4948 | + | 420 | WP_000737408.1 | hypothetical protein | - |
| GU332_RS25910 () | 4932..5237 | + | 306 | WP_000147046.1 | IncN plasmid KikA protein | - |
| GU332_RS25915 () | 5243..5500 | + | 258 | WP_000726018.1 | hypothetical protein | - |
| GU332_RS25920 () | 5614..5931 | + | 318 | WP_000623495.1 | hypothetical protein | - |
| GU332_RS25925 () | 5928..6416 | + | 489 | WP_000779030.1 | thermonuclease family protein | - |
| GU332_RS25930 () | 6427..6753 | + | 327 | WP_001020836.1 | hypothetical protein | - |
| GU332_RS25935 () | 7020..7772 | + | 753 | WP_000988468.1 | hypothetical protein | - |
| GU332_RS25940 () | 7845..8120 | + | 276 | WP_000109866.1 | hypothetical protein | - |
| GU332_RS25945 () | 8131..8703 | + | 573 | WP_001198958.1 | hypothetical protein | - |
| GU332_RS25950 () | 8708..10861 | + | 2154 | WP_001235745.1 | type IA DNA topoisomerase | - |
| GU332_RS25955 () | 10858..11064 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| GU332_RS25960 () | 11082..11546 | + | 465 | WP_001293134.1 | H-NS histone family protein | - |
| GU332_RS25965 () | 13051..13698 | + | 648 | WP_000587671.1 | P-loop NTPase | - |
| GU332_RS25970 () | 13773..14042 | + | 270 | WP_001086090.1 | hypothetical protein | - |
| GU332_RS25975 () | 14203..15054 | + | 852 | WP_000052343.1 | DUF2806 domain-containing protein | - |
| GU332_RS25980 () | 15206..15733 | - | 528 | WP_000577045.1 | DUF2726 domain-containing protein | - |
| GU332_RS25985 () | 15869..16273 | - | 405 | WP_001329491.1 | hypothetical protein | - |
| GU332_RS25990 () | 16286..17152 | - | 867 | WP_001353743.1 | replication initiation protein | - |
| GU332_RS25995 () | 18567..19082 | + | 516 | WP_001025395.1 | J domain-containing protein | - |
| GU332_RS26000 () | 19187..19729 | + | 543 | WP_001083907.1 | hypothetical protein | - |
| GU332_RS26005 () | 19726..19974 | + | 249 | WP_001230706.1 | hypothetical protein | Toxin Detail |
| GU332_RS26010 () | 19964..20191 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| GU332_RS26015 () | 20645..20944 | + | 300 | WP_000650312.1 | hypothetical protein | - |
| GU332_RS26020 () | 21038..21388 | + | 351 | WP_000854257.1 | hypothetical protein | - |
| GU332_RS26025 () | 21693..21941 | + | 249 | WP_000520550.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GU332_RS26030 () | 21938..22285 | + | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GU332_RS26035 () | 22648..23151 | + | 504 | WP_000781817.1 | hypothetical protein | - |
| GU332_RS26040 () | 23155..24384 | + | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| GU332_RS26045 () | 24461..24727 | + | 267 | WP_000134734.1 | hypothetical protein | - |
| GU332_RS26050 () | 24732..24965 | + | 234 | WP_000120384.1 | EexN family lipoprotein | - |
| GU332_RS26055 () | 25325..25945 | + | 621 | WP_000157548.1 | Type IV secretion system protein virB1 | VF |
| GU332_RS26060 () | 26013..26285 | + | 273 | WP_001329503.1 | Type IV secretion system protein virB2 | VF |
| GU332_RS26065 () | 26304..29051 | + | 2748 | WP_000105982.1 | Type IV secretion system protein virB4 | VF |
| GU332_RS26070 () | 29063..29779 | + | 717 | WP_000821434.1 | type IV secretion system VirB5 protein | - |
| GU332_RS26075 () | 29790..30869 | + | 1080 | WP_000007790.1 | hypothetical protein | VF |
| GU332_RS26080 () | 31384..32070 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|