MGE detailed information
MGE type: Prophage MGE length: 21300 bp
Accession: NZ_CP047546 Location: 2132270..2153569 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10236 Replicon: chromosome
Accession: NZ_CP047546 Location: 2132270..2153569 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10236 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN28_RS10410 () | 2128507..2128797 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| DXN28_RS10415 () | 2128865..2129218 | + | 354 | WP_001042119.1 | protein YebF | - |
| DXN28_RS10420 () | 2129312..2129971 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| DXN28_RS10425 () | 2130184..2132235 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| DXN28_RS10430 () | 2132270..2132968 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| DXN28_RS10435 () | 2132992..2133648 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| DXN28_RS10440 () | 2133756..2133986 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| DXN28_RS10445 () | 2134124..2134498 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| DXN28_RS10450 () | 2134499..2135374 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| DXN28_RS10455 () | 2135391..2135744 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2135844..2135989 | - | 146 | - | - | Antitoxin Detail |
| - | 2135884..2135987 | + | 104 | - | - | Toxin Detail |
| DXN28_RS10460 () | 2136118..2137041 | - | 924 | Protein_2051 | Type-2 restriction enzyme DpnI ; Integrase | Integrase |
| DXN28_RS10465 () | 2137305..2137766 | - | 462 | Protein_2052 | DNA breaking-rejoining protein | - |
| DXN28_RS10470 () | 2137755..2137946 | + | 192 | Protein_2053 | glycoside hydrolase family 19 protein | - |
| DXN28_RS10475 () | 2138000..2138533 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| DXN28_RS10480 () | 2138790..2138957 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| DXN28_RS10485 () | 2139022..2139210 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| DXN28_RS10490 () | 2139265..2139525 | + | 261 | Protein_2057 | DUF1441 family protein | - |
| DXN28_RS10495 () | 2139740..2140084 | + | 345 | Protein_2058 | macro domain-containing protein | - |
| DXN28_RS10500 () | 2140094..2140564 | + | 471 | Protein_2059 | tail fiber assembly protein | - |
| DXN28_RS10505 () | 2140661..2140861 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| DXN28_RS10510 () | 2141251..2141431 | - | 181 | Protein_2061 | IS3 family transposase | - |
| DXN28_RS10515 () | 2141431..2141556 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| DXN28_RS25825 () | 2142070..2142216 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| DXN28_RS10520 () | 2142210..2142377 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| DXN28_RS10525 () | 2142704..2143318 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| DXN28_RS10530 () | 2143328..2143486 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| DXN28_RS10535 () | 2143619..2144533 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| DXN28_RS10540 () | 2145846..2146268 | - | 423 | Protein_2068 | Ribosomal RNA small subunit methyltransferase I ; Integrase | Integrase |
| DXN28_RS10545 () | 2146338..2147532 | + | 1195 | Protein_2069 | IS256 family transposase IS285 | Transposase |
| DXN28_RS10550 () | 2147678..2147818 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| DXN28_RS10555 () | 2147984..2148253 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| DXN28_RS10560 () | 2148623..2149042 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| DXN28_RS10565 () | 2149430..2149906 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| DXN28_RS10570 () | 2150236..2150631 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| DXN28_RS10575 () | 2151314..2152036 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| DXN28_RS10580 () | 2152321..2152485 | + | 165 | WP_001134856.1 | membrane protein | - |
| DXN28_RS10585 () | 2152709..2153359 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| DXN28_RS10590 () | 2153378..2153569 | - | 192 | WP_000457836.1 | YebW family protein | - |
| DXN28_RS10595 () | 2153680..2153916 | - | 237 | WP_024131108.1 | YebV family protein | - |
| DXN28_RS10600 () | 2154034..2155473 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| DXN28_RS10605 () | 2155551..2158184 | - | 2634 | WP_001535256.1 | PqiB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.009 |