MGE detailed information
MGE type: Genomic_island MGE length: 11459 bp
Accession: NZ_CP047544 Location: 1026726..1038184 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10250 Replicon: chromosome
Accession: NZ_CP047544 Location: 1026726..1038184 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10250 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN29_RS04915 (1022871) | 1022871..1023251 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| DXN29_RS04920 (1023307) | 1023307..1025874 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| DXN29_RS04925 (1026033) | 1026033..1026554 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| DXN29_RS04930 (1026726) | 1026726..1027382 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| DXN29_RS04935 (1027729) | 1027729..1027934 | + | 206 | Protein_971 | IS5 family transposase ISEcl3 | Transposase |
| DXN29_RS04940 (1028007) | 1028007..1028534 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DXN29_RS04945 (1028531) | 1028531..1028821 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DXN29_RS04950 (1029091) | 1029091..1029269 | - | 179 | Protein_974 | IS3 family transposase | - |
| DXN29_RS04955 (1029510) | 1029510..1029836 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| DXN29_RS04960 (1030109) | 1030109..1030456 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| DXN29_RS04965 (1030441) | 1030441..1030890 | - | 450 | WP_000381610.1 | membrane protein | - |
| DXN29_RS04970 (1031321) | 1031321..1031764 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| DXN29_RS04975 (1032221) | 1032221..1032871 | + | 651 | WP_001674874.1 | hypothetical protein | VF |
| DXN29_RS04980 (1032868) | 1032868..1034556 | + | 1689 | WP_000848113.1 | hypothetical protein | VF |
| DXN29_RS04985 (1034553) | 1034553..1035671 | + | 1119 | WP_000612171.1 | hypothetical protein | VF |
| DXN29_RS04990 (1035696) | 1035696..1037753 | + | 2058 | WP_000927219.1 | hypothetical protein | VF |
| DXN29_RS04995 (1037777) | 1037777..1038184 | + | 408 | WP_001164066.1 | hypothetical protein | VF |
| DXN29_RS05000 (1038181) | 1038181..1039476 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| DXN29_RS05005 (1039454) | 1039454..1039897 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| DXN29_RS05010 (1039897) | 1039897..1040907 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| DXN29_RS05015 (1040907) | 1040907..1041818 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| DXN29_RS05020 (1041808) | 1041808..1042482 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| DXN29_RS05025 (1042508) | 1042508..1042768 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.003 |