MGE detailed information
MGE type: Prophage MGE length: 46871 bp
Accession: NZ_CP047542 Location: 2829844..2876714 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10330 Replicon: chromosome
Accession: NZ_CP047542 Location: 2829844..2876714 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10330 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN30_RS13800 () | 2825280..2826653 | + | 1374 | WP_000416128.1 | MFS transporter | - |
| DXN30_RS13805 () | 2826701..2827582 | - | 882 | WP_000984498.1 | protease HtpX | - |
| DXN30_RS13810 () | 2827776..2829824 | - | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| DXN30_RS13815 () | 2829844..2830530 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| DXN30_RS13820 () | 2830628..2831125 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| DXN30_RS13825 () | 2831254..2832537 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| DXN30_RS13830 () | 2832506..2835139 | + | 2634 | WP_001535256.1 | hypothetical protein | VF |
| DXN30_RS13835 () | 2835217..2836656 | + | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| DXN30_RS13840 () | 2836774..2837010 | + | 237 | WP_024131108.1 | YebV family protein | - |
| DXN30_RS13845 () | 2837121..2837312 | + | 192 | WP_000457836.1 | YebW family protein | - |
| DXN30_RS13850 () | 2837331..2837981 | - | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| DXN30_RS13855 () | 2838205..2838369 | - | 165 | WP_001134856.1 | membrane protein | - |
| DXN30_RS13860 () | 2838654..2839376 | - | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| DXN30_RS13865 () | 2840059..2840454 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| DXN30_RS13870 () | 2840784..2841260 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| DXN30_RS13875 () | 2841648..2842067 | - | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| DXN30_RS13880 () | 2842437..2842706 | + | 270 | WP_001752421.1 | hypothetical protein | - |
| DXN30_RS13885 () | 2842872..2843012 | + | 141 | WP_001617922.1 | hypothetical protein | - |
| DXN30_RS13890 () | 2843158..2844352 | - | 1195 | Protein_2698 | IS256 family transposase IS285 | Transposase |
| DXN30_RS13895 () | 2844422..2844844 | + | 423 | Protein_2699 | hypothetical protein ; Integrase | Integrase |
| DXN30_RS13900 () | 2846157..2847071 | + | 915 | WP_001233446.1 | DMT family transporter | - |
| DXN30_RS13905 () | 2847204..2847362 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| DXN30_RS13910 () | 2847372..2847986 | + | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| DXN30_RS13915 () | 2848313..2848480 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| DXN30_RS25620 () | 2848474..2848620 | + | 147 | WP_001520350.1 | hypothetical protein | - |
| DXN30_RS13920 () | 2849134..2849259 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| DXN30_RS13925 () | 2849259..2849439 | + | 181 | Protein_2706 | IS3 family transposase | - |
| DXN30_RS13930 () | 2849829..2850029 | + | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| DXN30_RS13935 () | 2850126..2850596 | - | 471 | Protein_2708 | tail fiber assembly protein | - |
| DXN30_RS13940 () | 2850606..2850950 | - | 345 | Protein_2709 | macro domain-containing protein | - |
| DXN30_RS13945 () | 2851165..2851425 | - | 261 | Protein_2710 | DUF1441 family protein | - |
| DXN30_RS13950 () | 2851480..2851668 | + | 189 | WP_001521334.1 | hypothetical protein | - |
| DXN30_RS13955 () | 2851733..2851900 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| DXN30_RS13960 () | 2852157..2852690 | - | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| DXN30_RS13965 () | 2852744..2852935 | - | 192 | Protein_2714 | glycoside hydrolase family 19 protein | - |
| DXN30_RS13970 () | 2852924..2853385 | + | 462 | Protein_2715 | DNA breaking-rejoining protein | - |
| DXN30_RS13975 () | 2853649..2854572 | + | 924 | Protein_2716 | hypothetical protein ; Integrase | Integrase |
| - | 2854701..2854846 | + | 146 | - | - | Antitoxin Detail |
| - | 2854703..2854806 | - | 104 | - | - | Toxin Detail |
| DXN30_RS13980 () | 2854946..2855299 | - | 354 | WP_000722368.1 | YebY family protein | - |
| DXN30_RS13985 () | 2855316..2856191 | - | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| DXN30_RS13990 () | 2856192..2856566 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| DXN30_RS13995 () | 2856704..2856934 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| DXN30_RS14000 () | 2857042..2857698 | + | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| DXN30_RS14005 () | 2857722..2858420 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| DXN30_RS14010 () | 2858455..2860506 | - | 2052 | WP_000936999.1 | oligopeptidase B | - |
| DXN30_RS14015 () | 2860719..2861378 | - | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| DXN30_RS14020 () | 2861472..2861825 | - | 354 | WP_001042119.1 | protein YebF | - |
| DXN30_RS14025 () | 2861893..2862183 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| DXN30_RS14030 () | 2862314..2863492 | + | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| DXN30_RS14035 () | 2863592..2864233 | - | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| DXN30_RS14040 () | 2864271..2866082 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| DXN30_RS14045 () | 2866317..2867792 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| DXN30_RS14050 () | 2868134..2869003 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| DXN30_RS14055 () | 2869127..2870569 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| DXN30_RS14060 () | 2870642..2871613 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| DXN30_RS14065 () | 2871730..2873049 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| DXN30_RS14070 () | 2873065..2874009 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| DXN30_RS14075 () | 2874088..2874843 | + | 756 | WP_000203014.1 | Zinc import ATP-binding protein ZnuC | VF |
| DXN30_RS14080 () | 2874840..2875625 | + | 786 | WP_000571508.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| DXN30_RS14085 () | 2875704..2876714 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| DXN30_RS14090 () | 2876723..2877334 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| DXN30_RS14095 () | 2877754..2878650 | + | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| DXN30_RS14100 () | 2879277..2879876 | + | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| DXN30_RS14105 () | 2879878..2880399 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| DXN30_RS14110 () | 2880436..2881176 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| DXN30_RS14115 () | 2881206..2881658 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25947 | NC_016810 | 1910986..1947632 | 0.006 |