MGE detailed information
MGE type: Genomic_island MGE length: 14289 bp
Accession: NZ_CP047542 Location: 1229894..1244182 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10330 Replicon: chromosome
Accession: NZ_CP047542 Location: 1229894..1244182 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10330 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN30_RS05725 () | 1224918..1225364 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| DXN30_RS05730 () | 1225383..1229477 | + | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| DXN30_RS05735 () | 1229471..1229734 | + | 264 | WP_000932531.1 | hypothetical protein | - |
| DXN30_RS05740 () | 1229798..1230667 | + | 870 | Protein_1104 | Protein RhsC | VF |
| DXN30_RS05745 () | 1230661..1231107 | + | 447 | WP_000935097.1 | protein SciX | - |
| DXN30_RS05750 () | 1231670..1232107 | + | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| DXN30_RS05755 () | 1232160..1232435 | - | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 1232170..1232592 | + | 423 | - | - | Antitoxin Detail |
| DXN30_RS05760 () | 1232677..1232793 | + | 117 | WP_227457392.1 | hypothetical protein | - |
| DXN30_RS05765 () | 1232876..1233184 | + | 309 | WP_010988969.1 | hypothetical protein | - |
| DXN30_RS05770 () | 1233286..1233534 | - | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| DXN30_RS05775 () | 1233587..1234291 | + | 705 | Protein_1111 | integrase core domain-containing protein | - |
| DXN30_RS05780 () | 1235041..1235553 | + | 513 | WP_077248260.1 | pilus assembly protein | - |
| DXN30_RS05785 () | 1235637..1236374 | + | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| DXN30_RS05790 () | 1236398..1238908 | + | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| DXN30_RS05795 () | 1238930..1239400 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
| DXN30_RS05800 () | 1239806..1240627 | + | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| DXN30_RS05805 () | 1240710..1240950 | + | 241 | Protein_1117 | PerC family transcriptional regulator | - |
| DXN30_RS05810 () | 1241442..1242389 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| DXN30_RS05815 () | 1242506..1242721 | + | 216 | WP_001575654.1 | hypothetical protein | - |
| DXN30_RS05820 () | 1242725..1243444 | - | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| DXN30_RS05825 () | 1243775..1244182 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| DXN30_RS05830 () | 1244553..1245320 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| DXN30_RS05835 () | 1245429..1247873 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| DXN30_RS05840 () | 1248113..1248691 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0 |