MGE detailed information
MGE type: Conjugative plasmid MGE length: 88993 bp
Accession: NZ_CP047539 Location: 1..88993 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10405 Replicon: plasmid unnamedB
Accession: NZ_CP047539 Location: 1..88993 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10405 Replicon: plasmid unnamedB
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN32_RS25815 (653) | 653..808 | - | 156 | WP_233782016.1 | hypothetical protein | - |
| DXN32_RS25820 (957) | 957..1205 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| DXN32_RS25825 (1202) | 1202..2494 | - | 1293 | WP_064198843.1 | hypothetical protein | VF |
| DXN32_RS25830 (2494) | 2494..3150 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| DXN32_RS25835 (3135) | 3135..3695 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| DXN32_RS25840 (3705) | 3705..4319 | - | 615 | WP_000908227.1 | hypothetical protein | VF |
| DXN32_RS25845 (4336) | 4336..5421 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| DXN32_RS25850 (5434) | 5434..6987 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| DXN32_RS25855 (6998) | 6998..7450 | - | 453 | WP_064198840.1 | hypothetical protein | VF |
| DXN32_RS25860 (7437) | 7437..8732 | - | 1296 | WP_064198841.1 | type 4b pilus protein PilO2 | - |
| DXN32_RS25865 (8725) | 8725..10407 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| DXN32_RS25870 (10421) | 10421..10858 | - | 438 | WP_000539806.1 | hypothetical protein | VF |
| DXN32_RS25875 (10858) | 10858..11925 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| DXN32_RS25880 (12972) | 12972..13226 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| DXN32_RS25885 (13398) | 13398..14081 | - | 684 | WP_000213862.1 | conjugal transfer protein TraC | - |
| DXN32_RS25890 (14335) | 14335..14868 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| DXN32_RS25895 (15310) | 15310..15597 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| DXN32_RS25900 (15635) | 15635..15793 | - | 159 | Protein_18 | ash family protein | - |
| DXN32_RS25905 (16750) | 16750..17781 | + | 1032 | WP_023518831.1 | plasmid replication initiator RepA | - |
| DXN32_RS25910 (18479) | 18479..18637 | + | 159 | WP_038349023.1 | hypothetical protein | - |
| DXN32_RS25915 (18692) | 18692..18961 | + | 270 | WP_032291093.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| DXN32_RS25920 (18961) | 18961..19239 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| DXN32_RS25925 (19279) | 19279..20127 | + | 849 | WP_032291092.1 | 3'-5' exonuclease | - |
| DXN32_RS25930 (20443) | 20443..20952 | - | 510 | WP_032291091.1 | hypothetical protein | - |
| DXN32_RS25935 (21008) | 21008..21610 | - | 603 | WP_000517687.1 | ProQ/FINO family protein | - |
| DXN32_RS25940 (21963) | 21963..23308 | + | 1346 | Protein_26 | protein YagA | - |
| DXN32_RS25945 (23859) | 23859..24161 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| DXN32_RS25950 (24158) | 24158..24784 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| DXN32_RS25955 (24956) | 24956..26227 | - | 1272 | WP_064198842.1 | Y-family DNA polymerase | - |
| DXN32_RS25960 (26227) | 26227..26664 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DXN32_RS25965 (26661) | 26661..26909 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| DXN32_RS25970 (27327) | 27327..28229 | + | 903 | WP_172796634.1 | DUF1281 domain-containing protein | - |
| DXN32_RS25975 (28233) | 28233..28319 | + | 87 | Protein_33 | hypothetical protein | - |
| DXN32_RS25980 (28324) | 28324..28659 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| DXN32_RS25985 (28997) | 28997..29977 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| DXN32_RS25990 (29980) | 29980..30402 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| DXN32_RS25995 (30406) | 30406..30717 | + | 312 | WP_094193298.1 | hypothetical protein | - |
| DXN32_RS26000 (30793) | 30793..31476 | + | 684 | WP_000086137.1 | DNA methylase | - |
| DXN32_RS26005 (31477) | 31477..31698 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| DXN32_RS26010 (31628) | 31628..32146 | + | 519 | WP_223168556.1 | DUF1380 family protein | - |
| DXN32_RS26015 (32191) | 32191..32961 | + | 771 | WP_001006204.1 | hypothetical protein | - |
| DXN32_RS26020 (33376) | 33376..33801 | + | 426 | WP_064198831.1 | antirestriction protein | - |
| DXN32_RS26025 (33848) | 33848..34270 | + | 423 | WP_000271744.1 | DUF1380 family protein | - |
| DXN32_RS26030 (34267) | 34267..34458 | + | 192 | WP_045177269.1 | hypothetical protein | - |
| DXN32_RS26035 (34529) | 34529..34843 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| DXN32_RS26040 (35227) | 35227..35754 | + | 528 | WP_064198832.1 | single-stranded DNA-binding protein | - |
| DXN32_RS26045 (35812) | 35812..36045 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| DXN32_RS26050 (36104) | 36104..38062 | + | 1959 | WP_064198833.1 | ParB/RepB/Spo0J family partition protein | - |
| DXN32_RS26055 (38117) | 38117..38551 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| DXN32_RS26060 (38548) | 38548..39267 | + | 720 | WP_001276268.1 | plasmid SOS inhibition protein A | - |
| DXN32_RS26065 (39264) | 39264..39860 | + | 597 | WP_001401763.1 | hypothetical protein | - |
| DXN32_RS26070 (40322) | 40322..40822 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| DXN32_RS26075 (41553) | 41553..41987 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| DXN32_RS26080 (42081) | 42081..42347 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| DXN32_RS26085 (42524) | 42524..42913 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| DXN32_RS26090 (42910) | 42910..43812 | + | 903 | WP_064198835.1 | Recombination-promoting nuclease RpnA | VF |
| DXN32_RS26095 (43874) | 43874..44080 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| DXN32_RS26100 (44111) | 44111..44362 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| DXN32_RS26105 (44941) | 44941..45789 | + | 849 | WP_031942443.1 | DUF4942 domain-containing protein | - |
| DXN32_RS26110 (45875) | 45875..46210 | - | 336 | WP_064198836.1 | hypothetical protein | - |
| DXN32_RS26115 (46444) | 46444..46776 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| DXN32_RS26120 (46787) | 46787..49486 | + | 2700 | WP_012783930.1 | Protein TraI | Relaxase |
| DXN32_RS26125 (49523) | 49523..51814 | - | 2292 | WP_012783931.1 | F-type conjugative transfer protein TrbC | - |
| DXN32_RS26130 (51807) | 51807..52877 | - | 1071 | WP_012783932.1 | IncI1-type conjugal transfer protein TrbB | - |
| DXN32_RS26135 (52896) | 52896..54104 | - | 1209 | WP_001703845.1 | IncI1-type conjugal transfer protein TrbA | - |
| DXN32_RS26140 (54421) | 54421..55620 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| DXN32_RS26145 (55630) | 55630..55818 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| DXN32_RS26150 (56099) | 56099..56878 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (57393) | 57393..57453 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (57393) | 57393..57453 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (57393) | 57393..57453 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (57393) | 57393..57453 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| DXN32_RS26155 (57505) | 57505..57657 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| DXN32_RS26160 (57729) | 57729..57980 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| DXN32_RS26385 (58481) | 58481..58576 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| DXN32_RS26170 (58641) | 58641..58817 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| DXN32_RS26175 (59208) | 59208..59417 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| DXN32_RS26180 (59489) | 59489..60151 | - | 663 | WP_012783935.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| DXN32_RS26185 (60222) | 60222..62390 | - | 2169 | WP_015508354.1 | DotA/TraY family protein | - |
| DXN32_RS26190 (62487) | 62487..63071 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| DXN32_RS26195 (63100) | 63100..64302 | - | 1203 | WP_001690627.1 | IncI1-type conjugal transfer protein TraW | - |
| DXN32_RS26200 (64269) | 64269..64883 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| DXN32_RS26205 (64883) | 64883..67927 | - | 3045 | WP_023518848.1 | IncI1-type conjugal transfer protein TraU | - |
| DXN32_RS26210 (68017) | 68017..68817 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| DXN32_RS26215 (68801) | 68801..68989 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| DXN32_RS26220 (69053) | 69053..69456 | - | 404 | Protein_82 | IncI1-type conjugal transfer protein TraR | - |
| DXN32_RS26225 (69507) | 69507..70034 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| DXN32_RS26230 (70034) | 70034..70738 | - | 705 | WP_064198837.1 | IncI1-type conjugal transfer protein TraP | - |
| DXN32_RS26235 (70738) | 70738..72027 | - | 1290 | WP_132501901.1 | conjugal transfer protein TraO | - |
| DXN32_RS26240 (72030) | 72030..73013 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| DXN32_RS26245 (73024) | 73024..73716 | - | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| DXN32_RS26250 (73713) | 73713..74060 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| DXN32_RS26255 (74078) | 74078..77842 | - | 3765 | WP_064198838.1 | DUF5710 domain-containing protein | - |
| DXN32_RS26260 (77931) | 77931..78482 | - | 552 | WP_000014586.1 | Phospholipase D | VF |
| DXN32_RS26265 (78497) | 78497..78787 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| DXN32_RS26270 (78784) | 78784..79932 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| DXN32_RS26275 (79929) | 79929..80747 | - | 819 | WP_032220737.1 | hypothetical protein | VF |
| DXN32_RS26280 (80744) | 80744..81202 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| DXN32_RS26285 (81618) | 81618..82277 | - | 660 | Protein_95 | IS5 family transposase IS903B | Transposase |
| DXN32_RS26290 (82312) | 82312..83187 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| DXN32_RS26295 (83437) | 83437..84699 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| DXN32_RS26300 (84852) | 84852..85457 | - | 606 | WP_064198839.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| DXN32_RS26305 (85517) | 85517..86719 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| DXN32_RS26310 (86805) | 86805..87629 | - | 825 | WP_001690630.1 | conjugal transfer protein TraE | - |
| DXN32_RS26315 (87780) | 87780..88934 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|