MGE detailed information
MGE type: Prophage MGE length: 46870 bp
Accession: NZ_CP047537 Location: 2749371..2796240 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10405 Replicon: chromosome
Accession: NZ_CP047537 Location: 2749371..2796240 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10405 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN32_RS13410 () | 2744807..2746180 | + | 1374 | WP_000416128.1 | MFS transporter | - |
| DXN32_RS13415 () | 2746228..2747109 | - | 882 | WP_000984498.1 | protease HtpX | - |
| DXN32_RS13420 () | 2747303..2749351 | - | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| DXN32_RS13425 () | 2749371..2750057 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| DXN32_RS13430 () | 2750155..2750652 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| DXN32_RS13435 () | 2750781..2752064 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| DXN32_RS13440 () | 2752033..2754666 | + | 2634 | WP_001535256.1 | hypothetical protein | VF |
| DXN32_RS13445 () | 2754744..2756183 | + | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| DXN32_RS13450 () | 2756301..2756537 | + | 237 | WP_024131108.1 | YebV family protein | - |
| DXN32_RS13455 () | 2756648..2756839 | + | 192 | WP_000457836.1 | YebW family protein | - |
| DXN32_RS13460 () | 2756858..2757508 | - | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| DXN32_RS13465 () | 2757732..2757896 | - | 165 | WP_001134856.1 | membrane protein | - |
| DXN32_RS13470 () | 2758181..2758903 | - | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| DXN32_RS13475 () | 2759586..2759981 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| DXN32_RS13480 () | 2760311..2760787 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| DXN32_RS13485 () | 2761175..2761594 | - | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| DXN32_RS13490 () | 2761964..2762233 | + | 270 | WP_001752421.1 | hypothetical protein | - |
| DXN32_RS13495 () | 2762399..2762539 | + | 141 | WP_001617922.1 | hypothetical protein | - |
| DXN32_RS13500 () | 2762685..2763879 | - | 1195 | Protein_2623 | IS256 family transposase IS285 | Transposase |
| DXN32_RS13505 () | 2763949..2764371 | + | 423 | Protein_2624 | hypothetical protein ; Integrase | Integrase |
| DXN32_RS13510 () | 2765684..2766597 | + | 914 | Protein_2625 | DMT family transporter | - |
| DXN32_RS13515 () | 2766730..2766888 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| DXN32_RS13520 () | 2766898..2767512 | + | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| DXN32_RS13525 () | 2767839..2768006 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| DXN32_RS26335 () | 2768000..2768146 | + | 147 | WP_001520350.1 | hypothetical protein | - |
| DXN32_RS13530 () | 2768660..2768785 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| DXN32_RS13535 () | 2768785..2768965 | + | 181 | Protein_2631 | IS3 family transposase | - |
| DXN32_RS13540 () | 2769355..2769555 | + | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| DXN32_RS13545 () | 2769652..2770122 | - | 471 | Protein_2633 | tail fiber assembly protein | - |
| DXN32_RS13550 () | 2770132..2770476 | - | 345 | Protein_2634 | macro domain-containing protein | - |
| DXN32_RS13555 () | 2770691..2770951 | - | 261 | Protein_2635 | DUF1441 family protein | - |
| DXN32_RS13560 () | 2771006..2771194 | + | 189 | WP_001521334.1 | hypothetical protein | - |
| DXN32_RS13565 () | 2771259..2771426 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| DXN32_RS13570 () | 2771683..2772216 | - | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| DXN32_RS13575 () | 2772270..2772461 | - | 192 | Protein_2639 | glycoside hydrolase family 19 protein | - |
| DXN32_RS13580 () | 2772450..2772911 | + | 462 | Protein_2640 | DNA breaking-rejoining protein | - |
| DXN32_RS13585 () | 2773175..2774098 | + | 924 | Protein_2641 | hypothetical protein ; Integrase | Integrase |
| - | 2774227..2774372 | + | 146 | - | - | Antitoxin Detail |
| - | 2774229..2774332 | - | 104 | - | - | Toxin Detail |
| DXN32_RS13590 () | 2774472..2774825 | - | 354 | WP_000722368.1 | YebY family protein | - |
| DXN32_RS13595 () | 2774842..2775717 | - | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| DXN32_RS13600 () | 2775718..2776092 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| DXN32_RS13605 () | 2776230..2776460 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| DXN32_RS13610 () | 2776568..2777224 | + | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| DXN32_RS13615 () | 2777248..2777946 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| DXN32_RS13620 () | 2777981..2780032 | - | 2052 | WP_000936999.1 | oligopeptidase B | - |
| DXN32_RS13625 () | 2780245..2780904 | - | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| DXN32_RS13630 () | 2780998..2781351 | - | 354 | WP_001042119.1 | protein YebF | - |
| DXN32_RS13635 () | 2781419..2781709 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| DXN32_RS13640 () | 2781840..2783018 | + | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| DXN32_RS13645 () | 2783118..2783759 | - | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| DXN32_RS13650 () | 2783797..2785608 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| DXN32_RS13655 () | 2785843..2787318 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| DXN32_RS13660 () | 2787660..2788529 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| DXN32_RS13665 () | 2788653..2790095 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| DXN32_RS13670 () | 2790168..2791139 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| DXN32_RS13675 () | 2791256..2792575 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| DXN32_RS13680 () | 2792591..2793535 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| DXN32_RS13685 () | 2793614..2794369 | + | 756 | WP_000203014.1 | Zinc import ATP-binding protein ZnuC | VF |
| DXN32_RS13690 () | 2794366..2795151 | + | 786 | WP_000571508.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| DXN32_RS13695 () | 2795230..2796240 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| DXN32_RS13700 () | 2796249..2796860 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| DXN32_RS13705 () | 2797280..2798176 | + | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| DXN32_RS13710 () | 2798803..2799402 | + | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| DXN32_RS13715 () | 2799404..2799925 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| DXN32_RS13720 () | 2799962..2800702 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| DXN32_RS13725 () | 2800732..2801184 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25947 | NC_016810 | 1910986..1947632 | 0.006 |