MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP047531 Location: 2471556..2483641 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10484 Replicon: chromosome
Accession: NZ_CP047531 Location: 2471556..2483641 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10484 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN09_RS12095 (2467477) | 2467477..2468679 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| DXN09_RS12100 (2468692) | 2468692..2470143 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| DXN09_RS12105 (2470287) | 2470287..2471294 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| DXN09_RS12110 (2471553) | 2471553..2473019 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| DXN09_RS12115 (2473827) | 2473827..2474541 | + | 715 | Protein_2377 | helix-turn-helix domain-containing protein | - |
| DXN09_RS12120 (2474597) | 2474597..2475505 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| DXN09_RS12125 (2475648) | 2475648..2475980 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| DXN09_RS12130 (2475970) | 2475970..2476185 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| DXN09_RS12135 (2476337) | 2476337..2476585 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DXN09_RS12140 (2476575) | 2476575..2476859 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DXN09_RS12145 (2477030) | 2477030..2477419 | + | 390 | WP_000194089.1 | RidA family protein | - |
| DXN09_RS12150 (2477471) | 2477471..2478550 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| DXN09_RS12155 (2478743) | 2478743..2479231 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| DXN09_RS12160 (2479276) | 2479276..2480784 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| DXN09_RS12165 (2480774) | 2480774..2482015 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| DXN09_RS12170 (2482085) | 2482085..2483641 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| DXN09_RS12175 (2483818) | 2483818..2485104 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| DXN09_RS12180 (2485079) | 2485079..2486104 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| DXN09_RS12185 (2486163) | 2486163..2486954 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| DXN09_RS12190 (2487000) | 2487000..2488091 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |