MGE detailed information
MGE type: Prophage MGE length: 42338 bp
Accession: NZ_CP047525 Location: 2126064..2168401 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11077 Replicon: chromosome
Accession: NZ_CP047525 Location: 2126064..2168401 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11077 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN14_RS10415 () | 2122257..2123153 | - | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| DXN14_RS10420 () | 2123573..2124184 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| DXN14_RS10425 () | 2124193..2125203 | + | 1011 | WP_000568508.1 | Holliday junction branch migration DNA helicase RuvB | - |
| DXN14_RS10430 () | 2125282..2126067 | - | 786 | WP_000571508.1 | zinc ABC transporter permease subunit ZnuB | - |
| DXN14_RS10435 () | 2126064..2126819 | - | 756 | WP_000203014.1 | Zinc import ATP-binding protein ZnuC | VF |
| DXN14_RS10440 () | 2126898..2127842 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| DXN14_RS10445 () | 2127858..2129177 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| DXN14_RS10450 () | 2129294..2130265 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| DXN14_RS10455 () | 2130338..2131780 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| DXN14_RS10460 () | 2131904..2132773 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| DXN14_RS10465 () | 2133115..2134590 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| DXN14_RS10470 () | 2134825..2136636 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| DXN14_RS10475 () | 2136674..2137315 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| DXN14_RS10480 () | 2137415..2138593 | - | 1179 | WP_131187063.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| DXN14_RS10485 () | 2138724..2139014 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| DXN14_RS10490 () | 2139082..2139435 | + | 354 | WP_001042119.1 | protein YebF | - |
| DXN14_RS10495 () | 2139529..2140188 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| DXN14_RS10500 () | 2140401..2142452 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| DXN14_RS10505 () | 2142487..2143185 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| DXN14_RS10510 () | 2143209..2143865 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| DXN14_RS10515 () | 2143973..2144203 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| DXN14_RS10520 () | 2144341..2144715 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| DXN14_RS10525 () | 2144716..2145591 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| DXN14_RS10530 () | 2145608..2145961 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2146061..2146206 | - | 146 | - | - | Antitoxin Detail |
| - | 2146101..2146204 | + | 104 | - | - | Toxin Detail |
| DXN14_RS10535 () | 2146335..2147258 | - | 924 | Protein_2067 | hypothetical protein ; Integrase | Integrase |
| DXN14_RS10540 () | 2147522..2147983 | - | 462 | Protein_2068 | DNA breaking-rejoining protein | - |
| DXN14_RS10545 () | 2147972..2148163 | + | 192 | Protein_2069 | glycoside hydrolase family 19 protein | - |
| DXN14_RS10550 () | 2148217..2148750 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| DXN14_RS10555 () | 2149007..2149174 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| DXN14_RS10560 () | 2149239..2149427 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| DXN14_RS10565 () | 2149482..2149742 | + | 261 | Protein_2073 | DUF1441 family protein | - |
| DXN14_RS10570 () | 2149957..2150301 | + | 345 | Protein_2074 | macro domain-containing protein | - |
| DXN14_RS10575 () | 2150311..2150781 | + | 471 | Protein_2075 | tail fiber assembly protein | - |
| DXN14_RS10580 () | 2150878..2151078 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| DXN14_RS10585 () | 2151468..2151648 | - | 181 | Protein_2077 | IS3 family transposase | - |
| DXN14_RS10590 () | 2151648..2151773 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| DXN14_RS25910 () | 2152287..2152433 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| DXN14_RS10595 () | 2152427..2152594 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| DXN14_RS10600 () | 2152921..2153535 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| DXN14_RS10605 () | 2153545..2153703 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| DXN14_RS10610 () | 2153836..2154750 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| DXN14_RS10615 () | 2156063..2156485 | - | 423 | Protein_2084 | hypothetical protein ; Integrase | Integrase |
| DXN14_RS10620 () | 2156555..2157749 | + | 1195 | Protein_2085 | IS256 family transposase IS285 | Transposase |
| DXN14_RS10625 () | 2157895..2158035 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| DXN14_RS10630 () | 2158201..2158470 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| DXN14_RS10635 () | 2158840..2159259 | + | 420 | WP_131187043.1 | GNAT family N-acetyltransferase | - |
| DXN14_RS10640 () | 2159647..2160123 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| DXN14_RS10645 () | 2160453..2160848 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| DXN14_RS10650 () | 2161531..2162253 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| DXN14_RS10655 () | 2162538..2162702 | + | 165 | WP_001134856.1 | membrane protein | - |
| DXN14_RS10660 () | 2162926..2163576 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| DXN14_RS10665 () | 2163595..2163786 | - | 192 | WP_000457836.1 | YebW family protein | - |
| DXN14_RS10670 () | 2163897..2164133 | - | 237 | WP_024131108.1 | YebV family protein | - |
| DXN14_RS10675 () | 2164251..2165690 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| DXN14_RS10680 () | 2165768..2168401 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| DXN14_RS10685 () | 2168370..2169653 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| DXN14_RS10690 () | 2169782..2170279 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| DXN14_RS10695 () | 2170377..2171063 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| DXN14_RS10700 () | 2171083..2173131 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25947 | NC_016810 | 1910986..1947632 | 0.006 |