MGE detailed information
MGE type: Conjugative plasmid MGE length: 87292 bp
Accession: NZ_CP047524 Location: 1..87292 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11216 Replicon: plasmid unnamedB
Accession: NZ_CP047524 Location: 1..87292 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11216 Replicon: plasmid unnamedB
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN15_RS25120 (984) | 984..1640 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| DXN15_RS25125 (1625) | 1625..2185 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| DXN15_RS25130 (2195) | 2195..2809 | - | 615 | WP_000908227.1 | hypothetical protein | VF |
| DXN15_RS25135 (2826) | 2826..3911 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| DXN15_RS25140 (3924) | 3924..5477 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| DXN15_RS25145 (5488) | 5488..5940 | - | 453 | WP_132503507.1 | hypothetical protein | VF |
| DXN15_RS25150 (5927) | 5927..7222 | - | 1296 | WP_064198841.1 | type 4b pilus protein PilO2 | - |
| DXN15_RS25155 (7215) | 7215..8897 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| DXN15_RS25160 (8911) | 8911..9348 | - | 438 | WP_000539806.1 | hypothetical protein | VF |
| DXN15_RS25165 (9348) | 9348..10415 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| DXN15_RS25170 (11462) | 11462..11716 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| DXN15_RS25175 (11888) | 11888..12571 | - | 684 | WP_000213862.1 | conjugal transfer protein TraC | - |
| DXN15_RS25180 (12825) | 12825..13358 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| DXN15_RS25185 (13800) | 13800..14087 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| DXN15_RS25190 (14125) | 14125..14283 | - | 159 | Protein_15 | ash family protein | - |
| DXN15_RS25195 (15240) | 15240..16271 | + | 1032 | WP_023518831.1 | plasmid replication initiator RepA | - |
| DXN15_RS25200 (16969) | 16969..17127 | + | 159 | WP_038349023.1 | hypothetical protein | - |
| DXN15_RS25205 (17182) | 17182..17451 | + | 270 | WP_032291093.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| DXN15_RS25210 (17451) | 17451..17729 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| DXN15_RS25215 (17769) | 17769..18617 | + | 849 | WP_032291092.1 | 3'-5' exonuclease | - |
| DXN15_RS25220 (18933) | 18933..19442 | - | 510 | WP_032291091.1 | hypothetical protein | - |
| DXN15_RS25225 (19498) | 19498..20100 | - | 603 | WP_000517687.1 | ProQ/FINO family protein | - |
| DXN15_RS25230 (20453) | 20453..21799 | + | 1347 | WP_001132021.1 | protein YagA | - |
| DXN15_RS25235 (22326) | 22326..22628 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| DXN15_RS25240 (22625) | 22625..23251 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| DXN15_RS25245 (23423) | 23423..24694 | - | 1272 | WP_064198842.1 | Y-family DNA polymerase | - |
| DXN15_RS25250 (24694) | 24694..25131 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DXN15_RS25255 (25128) | 25128..25376 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| DXN15_RS25260 (25794) | 25794..26696 | + | 903 | WP_172796634.1 | DUF1281 domain-containing protein | - |
| DXN15_RS25265 (26700) | 26700..26786 | + | 87 | Protein_30 | hypothetical protein | - |
| DXN15_RS25270 (26791) | 26791..27126 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| DXN15_RS25275 (27464) | 27464..28444 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| DXN15_RS25280 (28447) | 28447..28869 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| DXN15_RS25285 (28873) | 28873..29184 | + | 312 | WP_094193298.1 | hypothetical protein | - |
| DXN15_RS25290 (29260) | 29260..29943 | + | 684 | WP_000086137.1 | DNA methylase | - |
| DXN15_RS25295 (29944) | 29944..30165 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| DXN15_RS25300 (30095) | 30095..30613 | + | 519 | WP_223168556.1 | DUF1380 family protein | - |
| DXN15_RS25305 (30658) | 30658..31428 | + | 771 | WP_001006204.1 | hypothetical protein | - |
| DXN15_RS25310 (31843) | 31843..32268 | + | 426 | WP_064198831.1 | antirestriction protein | - |
| DXN15_RS25315 (32315) | 32315..32737 | + | 423 | WP_000271744.1 | DUF1380 family protein | - |
| DXN15_RS25320 (32734) | 32734..32925 | + | 192 | WP_045177269.1 | hypothetical protein | - |
| DXN15_RS25325 (32939) | 32939..33310 | + | 372 | WP_072105516.1 | hypothetical protein | - |
| DXN15_RS25330 (33694) | 33694..34221 | + | 528 | WP_064198832.1 | single-stranded DNA-binding protein | - |
| DXN15_RS25335 (34279) | 34279..34512 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| DXN15_RS25340 (34571) | 34571..36529 | + | 1959 | WP_064198833.1 | ParB/RepB/Spo0J family partition protein | - |
| DXN15_RS25345 (36584) | 36584..37018 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| DXN15_RS25350 (37015) | 37015..37734 | + | 720 | WP_001276268.1 | plasmid SOS inhibition protein A | - |
| DXN15_RS25355 (37731) | 37731..38327 | + | 597 | WP_001401763.1 | hypothetical protein | - |
| DXN15_RS25360 (38789) | 38789..39289 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| DXN15_RS25365 (40022) | 40022..40456 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| DXN15_RS25370 (40550) | 40550..40816 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| DXN15_RS25375 (40993) | 40993..41382 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| DXN15_RS25380 (41379) | 41379..42281 | + | 903 | WP_064198835.1 | Recombination-promoting nuclease RpnA | VF |
| DXN15_RS25385 (42343) | 42343..42549 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| DXN15_RS25390 (42580) | 42580..42831 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| DXN15_RS25395 (43410) | 43410..44258 | + | 849 | WP_031942443.1 | DUF4942 domain-containing protein | - |
| DXN15_RS25400 (44344) | 44344..44679 | - | 336 | WP_064198836.1 | hypothetical protein | - |
| DXN15_RS25405 (44913) | 44913..45245 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| DXN15_RS25410 (45256) | 45256..47955 | + | 2700 | WP_012783930.1 | Protein TraI | Relaxase |
| DXN15_RS25415 (47992) | 47992..50283 | - | 2292 | WP_012783931.1 | F-type conjugative transfer protein TrbC | - |
| DXN15_RS25420 (50276) | 50276..51346 | - | 1071 | WP_012783932.1 | IncI1-type conjugal transfer protein TrbB | - |
| DXN15_RS25425 (51365) | 51365..52573 | - | 1209 | WP_001703845.1 | IncI1-type conjugal transfer protein TrbA | - |
| DXN15_RS25430 (52880) | 52880..53659 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (54174) | 54174..54234 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (54174) | 54174..54234 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (54174) | 54174..54234 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (54174) | 54174..54234 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| DXN15_RS25435 (54286) | 54286..54438 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| DXN15_RS25440 (54510) | 54510..54761 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| DXN15_RS25670 (55262) | 55262..55357 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| DXN15_RS25450 (55422) | 55422..55598 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| DXN15_RS25455 (55990) | 55990..56199 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| DXN15_RS25460 (56271) | 56271..56933 | - | 663 | WP_012783935.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| DXN15_RS25465 (57004) | 57004..59172 | - | 2169 | WP_015508354.1 | DotA/TraY family protein | - |
| DXN15_RS25470 (59269) | 59269..59853 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| DXN15_RS25475 (59882) | 59882..61084 | - | 1203 | WP_001690627.1 | IncI1-type conjugal transfer protein TraW | - |
| DXN15_RS25480 (61051) | 61051..61665 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| DXN15_RS25485 (61665) | 61665..64709 | - | 3045 | WP_023518848.1 | IncI1-type conjugal transfer protein TraU | - |
| DXN15_RS25490 (64799) | 64799..65599 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| DXN15_RS25495 (65583) | 65583..65771 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| DXN15_RS25500 (65835) | 65835..66239 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| DXN15_RS25505 (66290) | 66290..66817 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| DXN15_RS25510 (66817) | 66817..67521 | - | 705 | WP_064198837.1 | IncI1-type conjugal transfer protein TraP | - |
| DXN15_RS25515 (67521) | 67521..68810 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| DXN15_RS25520 (68813) | 68813..69796 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| DXN15_RS25525 (69807) | 69807..70499 | - | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| DXN15_RS25530 (70496) | 70496..70843 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| DXN15_RS25535 (70861) | 70861..74625 | - | 3765 | WP_064198838.1 | DUF5710 domain-containing protein | - |
| DXN15_RS25540 (74715) | 74715..75266 | - | 552 | WP_000014586.1 | Phospholipase D | VF |
| DXN15_RS25545 (75281) | 75281..75571 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| DXN15_RS25550 (75568) | 75568..76716 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| DXN15_RS25555 (76713) | 76713..77531 | - | 819 | WP_032220737.1 | hypothetical protein | VF |
| DXN15_RS25560 (77528) | 77528..77986 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| DXN15_RS25565 (78402) | 78402..79061 | - | 660 | Protein_90 | IS5 family transposase IS903B | Transposase |
| DXN15_RS25570 (79096) | 79096..79971 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| DXN15_RS25575 (80221) | 80221..81483 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| DXN15_RS25580 (81636) | 81636..82241 | - | 606 | WP_064198839.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| DXN15_RS25585 (82301) | 82301..83503 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| DXN15_RS25590 (83589) | 83589..84413 | - | 825 | WP_001690630.1 | conjugal transfer protein TraE | - |
| DXN15_RS25595 (84564) | 84564..85718 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| DXN15_RS25600 (86738) | 86738..86986 | + | 249 | WP_001349157.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|