MGE detailed information
MGE type: Mobilizable plasmid MGE length: 97200 bp
Accession: NZ_CP047473 Location: 1..97200 Organism: Escherichia coli strain DY612 Replicon: plasmid pDY612-4
Accession: NZ_CP047473 Location: 1..97200 Organism: Escherichia coli strain DY612 Replicon: plasmid pDY612-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTK51_RS23180 (GTK51_22900) | 545..1384 | - | 840 | WP_094337857.1 | helicase RepA family protein | - |
| GTK51_RS23185 (GTK51_22905) | 1413..1619 | - | 207 | WP_094336940.1 | plasmid repression protein F | - |
| GTK51_RS23190 | 1675..2598 | - | 924 | WP_198870443.1 | Mobilization protein A | Relaxase |
| GTK51_RS23195 | 2643..3056 | - | 414 | WP_223384840.1 | Mobilization protein A | Relaxase |
| GTK51_RS23200 | 3166..3804 | - | 639 | Protein_5 | Mobilization protein A | Relaxase |
| GTK51_RS23205 (GTK51_22915) | 4004..4288 | + | 285 | WP_278182357.1 | mobilization protein | - |
| GTK51_RS23210 (GTK51_22920) | 4315..4482 | + | 168 | WP_161403145.1 | hypothetical protein | - |
| GTK51_RS23215 (GTK51_22925) | 5126..6619 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| GTK51_RS23220 (GTK51_22935) | 6855..7097 | - | 243 | Protein_9 | phosphoglucosamine mutase | - |
| GTK51_RS23225 (GTK51_22940) | 7184..7999 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| GTK51_RS23230 (GTK51_22945) | 8089..9179 | + | 1091 | WP_085940648.1 | IS4 family transposase ISAba1 | Transposase |
| GTK51_RS23235 (GTK51_22955) | 9376..9735 | - | 360 | WP_170628443.1 | phenol hydroxylase | - |
| GTK51_RS23240 (GTK51_22960) | 9911..10615 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GTK51_RS23245 (GTK51_22965) | 10681..12195 | + | 1515 | Protein_14 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| GTK51_RS23250 (GTK51_22970) | 12253..12495 | + | 243 | WP_000844627.1 | transposase | - |
| GTK51_RS23255 (GTK51_22975) | 12527..13177 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| GTK51_RS23260 (GTK51_22980) | 13283..14482 | + | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| GTK51_RS23265 (GTK51_22985) | 14514..15398 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| GTK51_RS23270 (GTK51_22990) | 15536..15928 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| GTK51_RS23275 (GTK51_22995) | 15932..17683 | + | 1752 | Protein_20 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| GTK51_RS23280 (GTK51_23000) | 17936..18172 | - | 237 | WP_223417154.1 | transposase | - |
| GTK51_RS23285 (GTK51_23005) | 18267..18479 | - | 213 | Protein_22 | 3'-5' exonuclease | - |
| GTK51_RS23290 (GTK51_23010) | 18525..18803 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| GTK51_RS23295 (GTK51_23015) | 18803..19072 | - | 270 | WP_021546940.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| GTK51_RS23300 (GTK51_23020) | 19759..20879 | + | 1121 | WP_094316150.1 | IS3 family transposase ISSen4 | Transposase |
| GTK51_RS23305 (GTK51_23025) | 20880..21218 | + | 339 | WP_063116667.1 | hypothetical protein | - |
| GTK51_RS23310 (GTK51_23030) | 21266..22255 | - | 990 | WP_001515196.1 | IS91 family transposase ISWz1 | Transposase |
| GTK51_RS23320 (GTK51_23040) | 23376..23669 | - | 294 | WP_063116710.1 | hypothetical protein | - |
| GTK51_RS23325 (GTK51_23045) | 23942..25660 | - | 1719 | WP_063116709.1 | hybrid sensor histidine kinase/response regulator | - |
| GTK51_RS23330 (GTK51_23050) | 25657..26145 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| GTK51_RS23335 (GTK51_23055) | 26138..27121 | - | 984 | WP_039267228.1 | hypothetical protein | - |
| GTK51_RS23340 (GTK51_23060) | 27125..28039 | - | 915 | WP_000891983.1 | helix-turn-helix domain-containing protein | - |
| GTK51_RS23345 (GTK51_23065) | 28353..28661 | + | 309 | WP_001776105.1 | hypothetical protein | - |
| GTK51_RS23350 (GTK51_23070) | 28654..28869 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| GTK51_RS23355 (GTK51_23075) | 28872..29534 | + | 663 | WP_000958205.1 | Type IV secretion system protein virB1 | VF |
| GTK51_RS23360 (GTK51_23080) | 29545..29844 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| GTK51_RS23365 (GTK51_23085) | 29854..30354 | + | 501 | WP_278182360.1 | hypothetical protein | VF |
| GTK51_RS23370 (GTK51_23090) | 30300..31004 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GTK51_RS23375 (GTK51_23095) | 31075..31179 | + | 105 | Protein_40 | hypothetical protein | - |
| GTK51_RS23380 (GTK51_23100) | 31286..32089 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| GTK51_RS23385 (GTK51_23105) | 32089..32925 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| GTK51_RS23390 (GTK51_23110) | 33032..33349 | + | 318 | Protein_43 | replication initiation protein | - |
| GTK51_RS23395 (GTK51_23115) | 34313..35749 | - | 1437 | WP_000105383.1 | glutathione synthase | - |
| GTK51_RS23400 (GTK51_23120) | 36016..36720 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTK51_RS23405 (GTK51_23125) | 36844..37050 | - | 207 | WP_032154787.1 | hemolysin expression modulator Hha | - |
| GTK51_RS23410 (GTK51_23130) | 37047..39200 | - | 2154 | WP_001235746.1 | type IA DNA topoisomerase | - |
| GTK51_RS23415 | 39205..39375 | - | 171 | Protein_48 | DNA topoisomerase III | - |
| GTK51_RS23420 (GTK51_23135) | 39387..40444 | - | 1058 | Protein_49 | IS3 family transposase IS2 | Transposase |
| GTK51_RS23425 (GTK51_23140) | 40590..41570 | - | 981 | WP_074518745.1 | IS5 family transposase IS5D | Transposase |
| GTK51_RS23430 (GTK51_23145) | 41602..41760 | + | 159 | WP_165488868.1 | hypothetical protein | - |
| GTK51_RS23435 (GTK51_23150) | 41772..42164 | + | 393 | WP_001281116.1 | hypothetical protein | - |
| GTK51_RS23440 (GTK51_23155) | 42482..43342 | + | 861 | WP_021546926.1 | replication protein RepA | - |
| GTK51_RS23445 (GTK51_23160) | 43742..44947 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| GTK51_RS23450 (GTK51_23165) | 44944..45909 | + | 966 | WP_000725192.1 | ParB family protein | - |
| GTK51_RS23455 (GTK51_23170) | 46174..46734 | + | 561 | Protein_56 | hypothetical protein | - |
| GTK51_RS23460 (GTK51_23175) | 46907..47305 | - | 399 | Protein_57 | IS91 family transposase ISSbo1 | Transposase |
| GTK51_RS23465 (GTK51_23180) | 47371..48075 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTK51_RS23470 (GTK51_23185) | 48285..48902 | - | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| GTK51_RS23475 (GTK51_23190) | 49094..50650 | - | 1557 | WP_000818556.1 | AAA family ATPase | - |
| GTK51_RS23480 (GTK51_23195) | 50913..51503 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| GTK51_RS23485 (GTK51_23200) | 51503..51760 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| GTK51_RS23490 (GTK51_23205) | 52114..54252 | + | 2139 | WP_000350638.1 | AAA family ATPase | - |
| GTK51_RS23495 (GTK51_23210) | 54414..54830 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GTK51_RS23500 (GTK51_23215) | 54827..55057 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| GTK51_RS23505 (GTK51_23220) | 55353..55625 | + | 273 | WP_061602529.1 | hypothetical protein | - |
| GTK51_RS23510 (GTK51_23225) | 55672..56376 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTK51_RS23515 (GTK51_23230) | 56602..57462 | + | 861 | WP_278182359.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| GTK51_RS23520 (GTK51_23235) | 57475..58017 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| GTK51_RS23525 (GTK51_23240) | 58499..58690 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| GTK51_RS23530 (GTK51_23245) | 58714..58941 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| GTK51_RS23535 (GTK51_23250) | 58992..60128 | + | 1137 | WP_000080861.1 | DUF3883 domain-containing protein | - |
| GTK51_RS23540 (GTK51_23255) | 60243..61613 | + | 1371 | WP_000971921.1 | IS1182 family transposase ISCfr1 | Transposase |
| GTK51_RS23545 (GTK51_23260) | 62434..63294 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| GTK51_RS23550 (GTK51_23265) | 63534..64202 | - | 669 | WP_063101692.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GTK51_RS23555 (GTK51_23270) | 64357..67329 | + | 2973 | WP_063101746.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| GTK51_RS23560 (GTK51_23275) | 67366..68010 | + | 645 | Protein_77 | IS3 family transposase ISNoc1 | Transposase |
| GTK51_RS23565 (GTK51_23280) | 68075..68778 | + | 704 | Protein_78 | IS6 family transposase IS26 | Transposase |
| GTK51_RS23570 (GTK51_23285) | 68968..69783 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| GTK51_RS23575 (GTK51_23290) | 69934..70638 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GTK51_RS23580 (GTK51_23295) | 70693..70950 | + | 258 | Protein_81 | hypothetical protein | - |
| GTK51_RS23585 (GTK51_23300) | 71096..71959 | + | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| GTK51_RS23590 (GTK51_23305) | 71997..72242 | + | 246 | WP_001354008.1 | GrpB family protein | - |
| GTK51_RS23595 (GTK51_23310) | 72711..73502 | + | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| GTK51_RS23600 | 73505..73780 | - | 276 | WP_109023896.1 | hypothetical protein | - |
| GTK51_RS23605 (GTK51_23315) | 73803..74435 | + | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| GTK51_RS23610 (GTK51_23320) | 74682..75014 | - | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| GTK51_RS23615 (GTK51_23325) | 75137..75975 | - | 839 | Protein_88 | Streptomycin 3''-adenylyltransferase | ARG |
| GTK51_RS23620 (GTK51_23330) | 76068..77327 | - | 1260 | WP_000095725.1 | Bicyclomycin resistance protein | ARG |
| GTK51_RS23625 (GTK51_23335) | 77542..78380 | - | 839 | Protein_90 | Streptomycin 3''-adenylyltransferase | ARG |
| GTK51_RS23630 (GTK51_23340) | 78386..78676 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| GTK51_RS23635 (GTK51_23345) | 78788..79285 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| GTK51_RS23640 (GTK51_23350) | 79430..80443 | + | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| GTK51_RS23645 (GTK51_23355) | 80646..80996 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| GTK51_RS23650 (GTK51_23360) | 81122..81682 | + | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| GTK51_RS23655 (GTK51_23365) | 81685..84636 | + | 2952 | WP_278182355.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| GTK51_RS23660 (GTK51_23370) | 84570..85046 | + | 477 | WP_223171565.1 | hypothetical protein | - |
| GTK51_RS23665 (GTK51_23375) | 85131..85835 | - | 705 | WP_001067784.1 | IS6 family transposase IS1006 | Transposase |
| GTK51_RS23670 (GTK51_23380) | 85899..86729 | + | 831 | Protein_99 | IS91 family transposase ISVsa3 | Transposase |
| GTK51_RS23675 (GTK51_23385) | 86760..87644 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| GTK51_RS23680 (GTK51_23390) | 87861..89075 | + | 1215 | WP_058657119.1 | Bicyclomycin resistance protein | ARG |
| GTK51_RS23685 (GTK51_23395) | 89103..89408 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| GTK51_RS23690 (GTK51_23400) | 89520..91013 | + | 1494 | WP_015344975.1 | IS91 family transposase ISVsa3 | Transposase |
| GTK51_RS23695 | 91241..91378 | - | 138 | WP_164538590.1 | hypothetical protein | - |
| GTK51_RS23700 (GTK51_23410) | 91798..92643 | + | 846 | WP_164538741.1 | macrolide hydrolase EstT | - |
| GTK51_RS23705 (GTK51_23415) | 92633..93790 | + | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| GTK51_RS23710 (GTK51_23420) | 94129..94290 | + | 162 | Protein_107 | IS91 family transposase | - |
| GTK51_RS23715 (GTK51_23425) | 94395..94772 | - | 378 | WP_000203935.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GTK51_RS23720 (GTK51_23430) | 94816..95838 | - | 1023 | WP_000083351.1 | cation diffusion facilitator family transporter | - |
| GTK51_RS23725 (GTK51_23440) | 96196..96612 | - | 417 | Protein_110 | dihydropteroate synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|