MGE detailed information
MGE type: Conjugative plasmid MGE length: 76661 bp
Accession: NZ_CP047407 Location: 1..76661 Organism: Escherichia coli strain MS6193 Replicon: plasmid pMS6193B
Accession: NZ_CP047407 Location: 1..76661 Organism: Escherichia coli strain MS6193 Replicon: plasmid pMS6193B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MS6193_RS24645 () | 54..758 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| MS6193_RS24650 () | 824..2339 | + | 1516 | Protein_1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| MS6193_RS24655 () | 2408..3292 | + | 885 | WP_001345827.1 | hypothetical protein | - |
| MS6193_RS24660 () | 3288..3457 | + | 170 | Protein_3 | resolvase | - |
| MS6193_RS24665 () | 3464..3631 | - | 168 | WP_001430249.1 | hypothetical protein | - |
| MS6193_RS24670 () | 3803..6478 | - | 2676 | WP_015059139.1 | hypothetical protein | - |
| MS6193_RS24675 () | 6781..7782 | + | 1002 | WP_000138753.1 | DUF4238 domain-containing protein | - |
| MS6193_RS24680 () | 8007..8469 | - | 463 | Protein_7 | hypothetical protein | - |
| MS6193_RS24685 () | 8578..8928 | - | 351 | WP_001430247.1 | plasmid partitioning/stability family protein | - |
| MS6193_RS24690 () | 8931..9893 | - | 963 | WP_000959875.1 | plasmid segregation protein ParM | - |
| MS6193_RS24695 () | 10025..10333 | + | 309 | WP_039021875.1 | hypothetical protein | - |
| MS6193_RS24700 () | 10410..11093 | + | 684 | WP_000085889.1 | DNA methylase | - |
| MS6193_RS24705 () | 11094..11315 | + | 222 | WP_001104902.1 | hypothetical protein | - |
| MS6193_RS24710 () | 11328..11762 | + | 435 | WP_000274504.1 | DUF1380 family protein | - |
| MS6193_RS24715 () | 11807..12577 | + | 771 | WP_001006207.1 | hypothetical protein | - |
| MS6193_RS24720 () | 12578..12922 | + | 345 | Protein_15 | DUF1472 domain-containing protein | - |
| MS6193_RS24725 () | 13060..13362 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| MS6193_RS24730 () | 13409..13831 | + | 423 | WP_000271684.1 | DUF1380 family protein | - |
| MS6193_RS24735 () | 13828..14019 | + | 192 | WP_039021874.1 | hypothetical protein | - |
| MS6193_RS24740 () | 15054..15284 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| MS6193_RS24745 () | 15336..16697 | + | 1362 | WP_000170715.1 | DUF3560 domain-containing protein | - |
| MS6193_RS24750 () | 16745..17308 | + | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| MS6193_RS24755 () | 17334..17549 | + | 216 | WP_032235513.1 | hypothetical protein | - |
| MS6193_RS24760 () | 17770..17958 | + | 189 | WP_032146593.1 | hypothetical protein | - |
| MS6193_RS24765 () | 17960..18166 | + | 207 | WP_000275858.1 | hypothetical protein | - |
| MS6193_RS24770 () | 18192..18731 | + | 540 | WP_001825195.1 | single-stranded DNA-binding protein | - |
| MS6193_RS24775 () | 18794..19027 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| MS6193_RS24780 () | 19093..21051 | + | 1959 | WP_001825193.1 | ParB/RepB/Spo0J family partition protein | - |
| MS6193_RS24785 () | 21106..21540 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| MS6193_RS24790 () | 21537..22256 | + | 720 | WP_013362833.1 | plasmid SOS inhibition protein A | - |
| MS6193_RS24795 () | 22268..22456 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 22268..22492 | + | 225 | NuclAT_0 | - | - |
| - () | 22268..22492 | + | 225 | NuclAT_0 | - | - |
| - () | 22268..22492 | + | 225 | NuclAT_0 | - | - |
| - () | 22268..22492 | + | 225 | NuclAT_0 | - | - |
| - () | 22425..22490 | + | 66 | - | - | Antitoxin Detail |
| MS6193_RS24800 () | 22536..22694 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| MS6193_RS24805 () | 23195..23383 | + | 189 | WP_042111937.1 | hypothetical protein | - |
| MS6193_RS24810 () | 23616..23903 | + | 288 | WP_000107544.1 | hypothetical protein | - |
| MS6193_RS24815 () | 24021..24842 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| MS6193_RS24820 () | 25139..25786 | - | 648 | WP_031943493.1 | hypothetical protein | VF |
| MS6193_RS24825 () | 26063..26446 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| MS6193_RS24830 () | 26637..27323 | + | 687 | WP_000332484.1 | PAS domain-containing protein | - |
| MS6193_RS24835 () | 27417..27644 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| MS6193_RS24840 () | 27678..28037 | + | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| MS6193_RS24845 () | 28052..28363 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| MS6193_RS24850 () | 28385..28951 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| MS6193_RS24855 () | 28962..29666 | + | 705 | WP_148713163.1 | type-F conjugative transfer system secretin TraK | - |
| MS6193_RS24860 () | 29666..31093 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| MS6193_RS24865 () | 31083..31673 | + | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| MS6193_RS24870 () | 31627..31980 | + | 354 | WP_071594066.1 | conjugal transfer protein TrbD | - |
| MS6193_RS24875 () | 31973..32224 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| MS6193_RS24880 () | 32221..32736 | + | 516 | WP_015059130.1 | type IV conjugative transfer system lipoprotein TraV | - |
| MS6193_RS24885 () | 32871..33092 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| MS6193_RS24890 () | 33085..33561 | + | 477 | WP_015059129.1 | hypothetical protein | - |
| MS6193_RS24895 () | 33641..33855 | + | 215 | Protein_50 | hypothetical protein | - |
| MS6193_RS24900 () | 33883..34245 | + | 363 | WP_000836675.1 | hypothetical protein | - |
| MS6193_RS24905 () | 34371..37001 | + | 2631 | WP_000069764.1 | type IV secretion system protein TraC | - |
| MS6193_RS24910 () | 36998..37384 | + | 387 | WP_000214092.1 | type-F conjugative transfer system protein TrbI | - |
| MS6193_RS24915 () | 37381..38013 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| MS6193_RS24920 () | 38010..39002 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| MS6193_RS24925 () | 39011..39649 | + | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| MS6193_RS24930 () | 39646..41454 | + | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| MS6193_RS24935 () | 41481..41738 | + | 258 | WP_000864352.1 | conjugal transfer protein TrbE | - |
| MS6193_RS24940 () | 41731..42474 | + | 744 | WP_001430248.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| MS6193_RS24945 () | 42490..42837 | + | 348 | WP_001287891.1 | conjugal transfer protein TrbA | - |
| MS6193_RS24950 () | 42956..43240 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| MS6193_RS24955 () | 43227..43772 | + | 546 | WP_000059821.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| MS6193_RS24960 () | 43702..44064 | + | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| MS6193_RS24965 () | 44064..45437 | + | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| MS6193_RS24970 () | 45434..48259 | + | 2826 | WP_001007045.1 | conjugal transfer mating pair stabilization protein TraG | - |
| MS6193_RS24975 () | 48256..48765 | + | 510 | WP_031943494.1 | conjugal transfer entry exclusion protein TraS | - |
| MS6193_RS24980 () | 48779..49510 | + | 732 | WP_094658456.1 | complement resistance protein TraT | - |
| MS6193_RS24985 () | 49763..51979 | + | 2217 | WP_022630316.1 | type IV conjugative transfer system coupling protein TraD | - |
| MS6193_RS24990 () | 51979..57249 | + | 5271 | WP_015059123.1 | Multifunctional conjugation protein TraI | Relaxase |
| MS6193_RS24995 () | 57269..58015 | + | 747 | WP_015059122.1 | conjugal transfer pilus acetylase TraX | - |
| MS6193_RS25000 () | 58070..58630 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| MS6193_RS25005 () | 59260..59937 | + | 678 | WP_000392235.1 | hypothetical protein | - |
| MS6193_RS25010 () | 60591..60803 | + | 213 | Protein_73 | ANR family transcriptional regulator | - |
| MS6193_RS25015 () | 61047..61508 | + | 462 | WP_015059120.1 | thermonuclease family protein | - |
| MS6193_RS25020 () | 61554..61763 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| MS6193_RS25025 () | 61801..62391 | + | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| MS6193_RS25030 () | 62631..62885 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| MS6193_RS25035 () | 63123..63197 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| MS6193_RS25040 () | 63190..64047 | + | 858 | WP_000130647.1 | incFII family plasmid replication initiator RepA | - |
| MS6193_RS25045 () | 64963..65955 | + | 993 | WP_001579760.1 | hypothetical protein | - |
| MS6193_RS25050 () | 66014..66631 | - | 618 | WP_000521604.1 | hypothetical protein | - |
| MS6193_RS25055 () | 66826..68382 | - | 1557 | WP_001579759.1 | AAA family ATPase | - |
| MS6193_RS25060 () | 68647..69237 | - | 591 | WP_000194568.1 | hypothetical protein | - |
| MS6193_RS25065 () | 69404..72322 | - | 2919 | Protein_84 | Tn3 family transposase TnpA_Tn3 | Transposase |
| MS6193_RS25070 () | 72376..73080 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| MS6193_RS25075 () | 73143..73511 | + | 369 | Protein_86 | Tn3 family transposase TnpR_Tn3 | Transposase |
| MS6193_RS25080 () | 73694..74554 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| MS6193_RS25085 () | 74724..75479 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| MS6193_RS25090 () | 75560..76108 | - | 549 | WP_014342204.1 | cation:proton antiporter | - |
| MS6193_RS25095 () | 76171..76521 | + | 351 | Protein_90 | 60 kDa chaperonin | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|