MGE detailed information
MGE type: Conjugative plasmid MGE length: 76633 bp
Accession: NZ_CP047381 Location: 1..76633 Organism: Escherichia coli strain CAU16175 Replicon: plasmid pCAU16175_3
Accession: NZ_CP047381 Location: 1..76633 Organism: Escherichia coli strain CAU16175 Replicon: plasmid pCAU16175_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTP13_RS30465 () | 1..858 | + | 858 | WP_122987679.1 | incFII family plasmid replication initiator RepA | - |
| GTP13_RS30470 () | 1559..1699 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| GTP13_RS30475 () | 1797..2078 | + | 282 | Protein_3 | histidine phosphatase family protein | - |
| GTP13_RS30480 () | 2355..3980 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| GTP13_RS30485 () | 4052..4816 | + | 765 | WP_167583054.1 | PAP2 family protein | - |
| GTP13_RS30490 () | 4870..5730 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| GTP13_RS30495 () | 5931..6628 | - | 698 | Protein_7 | IS1 family transposase | - |
| GTP13_RS30500 () | 6685..6948 | + | 264 | Protein_8 | conjugal transfer protein | - |
| GTP13_RS30505 () | 7193..7309 | + | 117 | WP_001791010.1 | tetracycline resistance determinant leader peptide | - |
| GTP13_RS30510 () | 7325..9244 | + | 1920 | WP_000691727.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| GTP13_RS30515 () | 9414..10118 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTP13_RS30520 () | 10171..12198 | + | 2028 | Protein_12 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GTP13_RS30525 () | 12276..12608 | + | 333 | WP_072134990.1 | CPBP family intramembrane metalloprotease | - |
| GTP13_RS30530 () | 12701..12958 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| GTP13_RS30535 () | 12891..13292 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| GTP13_RS30540 () | 13577..15349 | + | 1773 | WP_001262766.1 | DUF262 domain-containing protein | - |
| GTP13_RS30545 () | 15969..16274 | + | 306 | WP_001152000.1 | hypothetical protein | - |
| GTP13_RS30550 () | 16285..16519 | + | 235 | Protein_18 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GTP13_RS30555 () | 16647..16928 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| GTP13_RS30560 () | 17051..17401 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| GTP13_RS30565 () | 17404..18366 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| GTP13_RS30570 () | 18514..18807 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| GTP13_RS30575 () | 18884..19567 | + | 684 | WP_000085880.1 | DNA methylase | - |
| GTP13_RS30580 () | 19568..19789 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| GTP13_RS30585 () | 19803..20237 | + | 435 | WP_000274502.1 | DUF1380 family protein | - |
| GTP13_RS30590 () | 20282..21052 | + | 771 | WP_001006206.1 | hypothetical protein | - |
| GTP13_RS30600 () | 21592..21894 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| GTP13_RS30605 () | 21941..22363 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| GTP13_RS30610 () | 22360..22551 | + | 192 | WP_001027519.1 | hypothetical protein | - |
| GTP13_RS30615 () | 23588..23818 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| GTP13_RS30620 () | 23870..25231 | + | 1362 | WP_000170728.1 | DUF3560 domain-containing protein | - |
| GTP13_RS30625 () | 25278..25841 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| GTP13_RS30630 () | 25993..26229 | + | 237 | WP_071594222.1 | hypothetical protein | - |
| GTP13_RS30640 () | 26702..27235 | + | 534 | WP_053913426.1 | single-stranded DNA-binding protein | - |
| GTP13_RS30645 () | 27293..27526 | + | 234 | WP_053913425.1 | DUF905 family protein | - |
| GTP13_RS30650 () | 27590..29548 | + | 1959 | WP_167583057.1 | ParB/RepB/Spo0J family partition protein | - |
| GTP13_RS30655 () | 29617..30051 | + | 435 | WP_000845930.1 | conjugation system SOS inhibitor PsiB | - |
| GTP13_RS30660 () | 30048..30767 | + | 720 | WP_053913421.1 | plasmid SOS inhibition protein A | - |
| GTP13_RS30665 () | 30767..31285 | + | 519 | WP_112899860.1 | hypothetical protein | - |
| - () | 31261..31409 | + | 149 | NuclAT_1 | - | Antitoxin Detail |
| - () | 31261..31409 | + | 149 | NuclAT_1 | - | Antitoxin Detail |
| - () | 31261..31409 | + | 149 | NuclAT_1 | - | Antitoxin Detail |
| - () | 31261..31409 | + | 149 | NuclAT_1 | - | Antitoxin Detail |
| GTP13_RS30670 () | 31461..31619 | + | 159 | WP_012817833.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| GTP13_RS30675 () | 32081..32295 | - | 215 | Protein_41 | hypothetical protein | - |
| GTP13_RS31225 () | 32323..32529 | + | 207 | WP_112899861.1 | single-stranded DNA-binding protein | - |
| GTP13_RS30680 () | 32555..33082 | + | 528 | WP_000290816.1 | single-stranded DNA-binding protein | - |
| GTP13_RS30685 () | 33138..33371 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| GTP13_RS30690 () | 33435..35393 | + | 1959 | Protein_45 | ParB/RepB/Spo0J family partition protein | - |
| GTP13_RS30695 () | 35462..35896 | + | 435 | WP_001623019.1 | conjugation system SOS inhibitor PsiB | - |
| GTP13_RS30700 () | 35893..36612 | + | 720 | WP_001629131.1 | plasmid SOS inhibition protein A | - |
| GTP13_RS30705 () | 36624..36812 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 36624..36848 | + | 225 | NuclAT_0 | - | - |
| - () | 36624..36848 | + | 225 | NuclAT_0 | - | - |
| - () | 36624..36848 | + | 225 | NuclAT_0 | - | - |
| - () | 36624..36848 | + | 225 | NuclAT_0 | - | - |
| - () | 36781..36846 | + | 66 | - | - | Antitoxin Detail |
| GTP13_RS30710 () | 36892..37050 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| GTP13_RS31230 () | 37741..37947 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| GTP13_RS30720 () | 37972..38259 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| GTP13_RS30725 () | 38377..39198 | + | 822 | WP_137509722.1 | DUF945 domain-containing protein | - |
| GTP13_RS30730 () | 39495..40142 | - | 648 | WP_000614935.1 | hypothetical protein | VF |
| GTP13_RS30735 () | 40419..40802 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| GTP13_RS30740 () | 40993..41679 | + | 687 | WP_073520017.1 | PAS domain-containing protein | - |
| GTP13_RS30745 () | 41773..42000 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| GTP13_RS30750 () | 42034..42399 | + | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| GTP13_RS30755 () | 42414..42725 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| GTP13_RS30760 () | 42747..43313 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| GTP13_RS30765 () | 43324..44028 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| GTP13_RS30770 () | 44028..45455 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| GTP13_RS30775 () | 45445..46017 | + | 573 | WP_024179131.1 | conjugal transfer protein TraP | - |
| GTP13_RS30780 () | 46014..46334 | + | 321 | WP_001462162.1 | conjugal transfer protein TrbD | - |
| GTP13_RS30785 () | 46327..46578 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| GTP13_RS30790 () | 46575..47090 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| GTP13_RS30795 () | 47225..47446 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| GTP13_RS30800 () | 47606..50233 | + | 2628 | WP_063082140.1 | type IV secretion system protein TraC | - |
| GTP13_RS30805 () | 50230..50616 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| GTP13_RS30810 () | 50613..51245 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| GTP13_RS30815 () | 51242..52234 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| GTP13_RS30820 () | 52260..52721 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| GTP13_RS30825 () | 52751..53203 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| GTP13_RS30830 () | 53231..53869 | + | 639 | WP_001104086.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| GTP13_RS30835 () | 53866..55674 | + | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| GTP13_RS30840 () | 55701..55958 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| GTP13_RS30845 () | 55951..56694 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| GTP13_RS30850 () | 56710..57057 | + | 348 | WP_072656932.1 | conjugal transfer protein TrbA | - |
| GTP13_RS30855 () | 57176..57460 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| GTP13_RS30860 () | 57447..57992 | + | 546 | WP_000060037.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| GTP13_RS30865 () | 57922..58284 | + | 363 | WP_073519999.1 | P-type conjugative transfer protein TrbJ | - |
| GTP13_RS30870 () | 58284..59657 | + | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| GTP13_RS30875 () | 59654..62473 | + | 2820 | WP_113440932.1 | conjugal transfer mating pair stabilization protein TraG | - |
| GTP13_RS30880 () | 62492..62989 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| GTP13_RS30885 () | 63021..63752 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| GTP13_RS30890 () | 63955..64692 | + | 738 | WP_000199911.1 | hypothetical protein | - |
| GTP13_RS30895 () | 64743..66968 | + | 2226 | WP_167583060.1 | type IV conjugative transfer system coupling protein TraD | - |
| GTP13_RS30900 () | 66968..72238 | + | 5271 | WP_167583063.1 | Multifunctional conjugation protein TraI | Relaxase |
| GTP13_RS30905 () | 72258..73004 | + | 747 | WP_089046742.1 | conjugal transfer pilus acetylase TraX | - |
| GTP13_RS30910 () | 73059..73619 | + | 561 | WP_000139348.1 | fertility inhibition protein FinO | - |
| GTP13_RS30915 () | 73751..73963 | + | 213 | WP_001385659.1 | hypothetical protein | - |
| GTP13_RS30920 () | 74250..74927 | + | 678 | WP_000392235.1 | hypothetical protein | - |
| GTP13_RS30925 () | 75247..75837 | + | 591 | WP_012817838.1 | DUF2726 domain-containing protein | - |
| GTP13_RS30930 () | 76077..76331 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|