MGE detailed information
MGE type: Conjugative plasmid MGE length: 161176 bp
Accession: NZ_CP047380 Location: 1..161176 Organism: Escherichia coli strain CAU16175 Replicon: plasmid pCAU16175_2
Accession: NZ_CP047380 Location: 1..161176 Organism: Escherichia coli strain CAU16175 Replicon: plasmid pCAU16175_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTP13_RS29555 () | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| GTP13_RS29560 () | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| GTP13_RS29565 () | 2124..2267 | - | 144 | WP_032351338.1 | hypothetical protein | - |
| GTP13_RS29570 () | 2318..2479 | + | 162 | Protein_3 | epoxyqueuosine reductase QueH | - |
| GTP13_RS29575 () | 2790..3164 | - | 375 | WP_024241295.1 | hypothetical protein | - |
| GTP13_RS29580 () | 3367..3546 | + | 180 | WP_000526859.1 | hypothetical protein | VF |
| GTP13_RS29585 () | 3795..4232 | + | 438 | WP_024241296.1 | hypothetical protein | - |
| GTP13_RS29590 () | 4357..4569 | - | 213 | Protein_7 | IS256 family transposase ISEic2 | Transposase |
| GTP13_RS31185 () | 4616..4924 | - | 309 | Protein_8 | IS21 family transposase IS100kyp | Transposase |
| GTP13_RS31190 () | 4925..5116 | - | 192 | Protein_9 | IS21 family transposase IS100kyp | Transposase |
| GTP13_RS29600 () | 5642..5990 | - | 349 | Protein_10 | IS200/IS605 family transposase | - |
| GTP13_RS29610 () | 7362..7967 | + | 606 | Protein_12 | IS4 family transposase IS4 | Transposase |
| GTP13_RS29615 () | 8002..8448 | - | 447 | Protein_13 | IS4 family transposase | - |
| GTP13_RS29620 () | 8453..8539 | + | 87 | Protein_14 | CopG family transcriptional regulator | - |
| GTP13_RS29625 () | 8601..14348 | - | 5748 | WP_209279481.1 | DUF3491 domain-containing protein | - |
| GTP13_RS31195 () | 15342..17546 | - | 2205 | Protein_16 | glycosyl transferase | - |
| GTP13_RS29635 () | 17592..18025 | + | 434 | Protein_17 | transposase | - |
| GTP13_RS29640 () | 18050..18435 | - | 386 | Protein_18 | IS200-IS605 family transposase ISEc46 | Transposase |
| GTP13_RS29645 () | 18428..18567 | - | 140 | Protein_19 | helix-turn-helix domain-containing protein | - |
| GTP13_RS29650 () | 19178..19969 | - | 792 | Protein_20 | IS3 family transposase ISKpn38 | Transposase |
| GTP13_RS29655 () | 20222..20365 | - | 144 | Protein_21 | GNAT family N-acetyltransferase | - |
| GTP13_RS29660 () | 20353..21155 | + | 803 | Protein_22 | IS21 family transposase IS100kyp | Transposase |
| GTP13_RS29665 () | 21152..21934 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| GTP13_RS29670 () | 22002..22604 | - | 603 | Protein_24 | IS3 family transposase | - |
| GTP13_RS29675 () | 22764..23054 | - | 291 | Protein_25 | hypothetical protein | VF |
| GTP13_RS29680 () | 23109..23546 | + | 438 | Protein_26 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GTP13_RS29685 () | 23830..24417 | + | 588 | WP_000905839.1 | Serine acetyltransferase | VF |
| GTP13_RS29690 () | 24506..24699 | - | 194 | Protein_28 | plasmid SOS inhibition protein A | - |
| GTP13_RS29695 () | 24702..24935 | - | 234 | Protein_29 | IS256 family transposase ISEc39 | Transposase |
| GTP13_RS29700 () | 25031..25872 | + | 842 | Protein_30 | IS3 family transposase | - |
| GTP13_RS29705 () | 25863..25988 | - | 126 | WP_029797792.1 | IS3 family transposase IS629 | Transposase |
| GTP13_RS29710 () | 26097..26705 | - | 609 | WP_001418709.1 | YjiK family protein | - |
| GTP13_RS29715 () | 27388..27870 | + | 483 | Protein_33 | T3SS effector NleG family protein | - |
| GTP13_RS29720 () | 27870..28013 | - | 144 | Protein_34 | peptide deformylase | - |
| GTP13_RS29725 () | 28122..31736 | - | 3615 | Protein_35 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| GTP13_RS29735 () | 33042..33668 | - | 627 | WP_167583026.1 | peptidase dimerization domain-containing protein | - |
| GTP13_RS29740 () | 33799..34913 | - | 1115 | Protein_38 | IS91 family transposase ISSbo1 | Transposase |
| GTP13_RS29745 () | 34923..35111 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| GTP13_RS29750 () | 35228..44540 | - | 9313 | Protein_40 | Toxin B | VF |
| GTP13_RS29755 () | 44647..44799 | - | 153 | Protein_41 | IS1 family transposase | - |
| GTP13_RS29760 () | 44796..44916 | - | 121 | Protein_42 | IS21 family transposase ISEc62 | Transposase |
| GTP13_RS29765 () | 44956..45219 | - | 264 | Protein_43 | IS21 family transposase ISEc62 | Transposase |
| GTP13_RS29770 () | 45307..45698 | + | 392 | Protein_44 | IS3 family transposase IS3H | Transposase |
| GTP13_RS29775 () | 46184..47817 | + | 1634 | Protein_45 | ISL3 family transposase ISEc38 | Transposase |
| GTP13_RS29780 () | 47903..48481 | + | 579 | Protein_46 | IS91 family transposase ISEc37 | Transposase |
| GTP13_RS29785 () | 48493..48687 | + | 195 | Protein_47 | IS91 family transposase ISEc37 | Transposase |
| GTP13_RS29790 () | 48680..49075 | - | 396 | Protein_48 | group II intron reverse transcriptase/maturase | - |
| GTP13_RS29795 () | 49130..49828 | + | 699 | WP_032163645.1 | IS66 family transposase ISCro1 | Transposase |
| GTP13_RS29800 () | 49765..49989 | + | 225 | WP_167583051.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| GTP13_RS29805 () | 50579..50848 | - | 270 | WP_000405636.1 | PerC family transcriptional regulator | - |
| GTP13_RS29810 () | 50897..51285 | - | 389 | Protein_52 | protein PerB | - |
| GTP13_RS29815 () | 51330..52151 | - | 822 | Protein_53 | helix-turn-helix transcriptional regulator | - |
| GTP13_RS29825 () | 53092..54217 | + | 1126 | Protein_54 | group II intron reverse transcriptase/maturase | - |
| GTP13_RS29830 () | 54738..58679 | + | 3942 | WP_096317679.1 | Serine protease EspC | VF |
| GTP13_RS29835 () | 58771..59238 | + | 468 | WP_032163643.1 | Secreted effector protein EspF(U) | VF |
| GTP13_RS29840 () | 59497..60659 | + | 1163 | WP_096317678.1 | IS3 family transposase ISEc17 | Transposase |
| GTP13_RS29845 () | 60946..62060 | - | 1115 | Protein_58 | IS91 family transposase ISSbo1 | Transposase |
| GTP13_RS29850 () | 62070..62258 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| GTP13_RS29855 () | 62373..63251 | + | 879 | Protein_60 | hypothetical protein | VF |
| GTP13_RS29860 () | 63844..65151 | + | 1308 | WP_161954550.1 | ferric reductase-like transmembrane domain-containing protein | - |
| GTP13_RS29865 () | 65640..66221 | + | 582 | WP_096317730.1 | hypothetical protein | VF |
| GTP13_RS29870 () | 66413..66736 | + | 324 | WP_096317729.1 | hypothetical protein | - |
| GTP13_RS29875 () | 66872..67201 | - | 330 | WP_106485644.1 | hypothetical protein | - |
| GTP13_RS29880 () | 67310..68290 | + | 981 | WP_032216024.1 | IS5 family transposase ISKpn26 | Transposase |
| GTP13_RS29895 () | 69886..70410 | - | 525 | Protein_67 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| GTP13_RS31200 () | 70581..70772 | + | 192 | Protein_68 | IS91 family transposase | - |
| GTP13_RS31205 () | 70740..70955 | - | 216 | Protein_69 | helix-turn-helix transcriptional regulator | - |
| GTP13_RS29905 () | 71051..71308 | + | 258 | Protein_70 | IS3 family transposase IS911 | Transposase |
| GTP13_RS29910 () | 71376..72143 | + | 768 | Protein_71 | IS30 family transposase IS30D | Transposase |
| GTP13_RS29915 () | 72202..72896 | + | 695 | WP_085949012.1 | IS1 family transposase | - |
| GTP13_RS29920 () | 72915..73406 | - | 492 | Protein_73 | hypothetical protein | - |
| GTP13_RS29925 () | 73653..73811 | + | 159 | WP_001632354.1 | hypothetical protein | - |
| GTP13_RS29930 () | 73829..74176 | - | 348 | WP_064560668.1 | hypothetical protein | - |
| GTP13_RS29935 () | 74472..74954 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| GTP13_RS29940 () | 75071..75274 | - | 204 | WP_096245924.1 | hypothetical protein | - |
| GTP13_RS29945 () | 75280..75762 | - | 483 | Protein_78 | 3'-5' exonuclease | - |
| GTP13_RS29950 () | 75923..76147 | - | 225 | WP_050439874.1 | hypothetical protein | - |
| GTP13_RS29955 () | 76399..76728 | + | 330 | WP_001541974.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GTP13_RS29960 () | 76709..76990 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| GTP13_RS29965 () | 77005..77331 | + | 327 | Protein_82 | DNA-binding protein | - |
| GTP13_RS29970 () | 77412..77486 | + | 75 | Protein_83 | CPBP family intramembrane metalloprotease | - |
| GTP13_RS29975 () | 77621..77815 | + | 195 | Protein_84 | IS66 family transposase ISEc23 | Transposase |
| GTP13_RS29985 () | 79220..79609 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| GTP13_RS29990 () | 79653..81860 | - | 2208 | WP_167583029.1 | Catalase-peroxidase | VF |
| GTP13_RS30000 () | 83366..87457 | + | 4092 | WP_064560619.1 | Serine protease SepA autotransporter | VF |
| GTP13_RS30005 () | 87660..88354 | + | 695 | WP_085949012.1 | IS1 family transposase | - |
| GTP13_RS30010 () | 88489..88770 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GTP13_RS30015 () | 88767..89036 | - | 270 | WP_044720349.1 | hypothetical protein | Antitoxin Detail |
| GTP13_RS30020 () | 89539..90162 | + | 624 | WP_077150956.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| GTP13_RS30025 () | 90143..93109 | + | 2967 | WP_072024409.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| GTP13_RS30030 () | 93135..93359 | + | 225 | Protein_95 | transposase | - |
| GTP13_RS30035 () | 93573..93761 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| GTP13_RS30040 () | 93771..94885 | + | 1115 | Protein_97 | IS91 family transposase ISSbo1 | Transposase |
| GTP13_RS30045 () | 95000..95203 | - | 204 | WP_096317774.1 | hypothetical protein | - |
| GTP13_RS30050 () | 95261..95416 | - | 156 | WP_161954553.1 | hypothetical protein | - |
| GTP13_RS30055 () | 96117..96945 | - | 829 | Protein_100 | incFII family plasmid replication initiator RepA | - |
| GTP13_RS30060 () | 96938..97012 | - | 75 | WP_096246030.1 | RepA leader peptide Tap | - |
| GTP13_RS30065 () | 97249..97503 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| GTP13_RS30070 () | 97743..98333 | - | 591 | WP_000766812.1 | DUF2726 domain-containing protein | - |
| GTP13_RS30075 () | 98371..98580 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| GTP13_RS30080 () | 98626..99087 | - | 462 | WP_064559535.1 | thermonuclease family protein | - |
| GTP13_RS30085 () | 99332..99544 | - | 213 | WP_001371875.1 | ANR family transcriptional regulator | - |
| GTP13_RS30090 () | 99677..100237 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| GTP13_RS30095 () | 100340..101200 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| GTP13_RS30100 () | 101259..102005 | - | 747 | WP_167583032.1 | conjugal transfer pilus acetylase TraX | - |
| GTP13_RS30105 () | 102025..107295 | - | 5271 | WP_167583035.1 | Multifunctional conjugation protein TraI | Relaxase |
| GTP13_RS30110 () | 107295..109466 | - | 2172 | WP_050951100.1 | type IV conjugative transfer system coupling protein TraD | - |
| GTP13_RS30115 () | 109590..109994 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| GTP13_RS30120 () | 109991..110338 | + | 348 | WP_106485702.1 | IS66 family transposase ISKpn24 | Transposase |
| GTP13_RS30125 () | 110387..111925 | + | 1539 | WP_167583038.1 | IS66 family transposase ISEc22 | Transposase |
| GTP13_RS30130 () | 112181..112912 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| GTP13_RS30135 () | 112944..113447 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| GTP13_RS30140 () | 113462..116286 | - | 2825 | Protein_117 | conjugal transfer mating pair stabilization protein TraG | - |
| GTP13_RS30145 () | 116283..117656 | - | 1374 | WP_000944322.1 | conjugal transfer protein TraH | - |
| GTP13_RS30150 () | 117656..118018 | - | 363 | WP_071587080.1 | P-type conjugative transfer protein TrbJ | - |
| GTP13_RS30155 () | 117948..118493 | - | 546 | WP_016236310.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| GTP13_RS30160 () | 118480..118764 | - | 285 | WP_096245929.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| GTP13_RS30165 () | 118883..119230 | - | 348 | WP_167583041.1 | conjugal transfer protein TrbA | - |
| GTP13_RS30170 () | 119246..119989 | - | 744 | WP_024226183.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| GTP13_RS30175 () | 119982..120239 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| GTP13_RS30180 () | 120266..122074 | - | 1809 | WP_000821843.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| GTP13_RS30185 () | 122071..122709 | - | 639 | WP_097412159.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| GTP13_RS30190 () | 122718..123710 | - | 993 | WP_024226181.1 | conjugal transfer pilus assembly protein TraU | - |
| GTP13_RS30195 () | 123707..124339 | - | 633 | WP_106505245.1 | type-F conjugative transfer system protein TraW | - |
| GTP13_RS30200 () | 124336..124722 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| GTP13_RS30205 () | 124719..127346 | - | 2628 | WP_024226180.1 | type IV secretion system protein TraC | - |
| GTP13_RS30210 () | 127506..127727 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| GTP13_RS30215 () | 127862..128377 | - | 516 | WP_024226179.1 | type IV conjugative transfer system lipoprotein TraV | - |
| GTP13_RS30220 () | 128374..128625 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| GTP13_RS30225 () | 128637..128867 | - | 231 | WP_071796549.1 | conjugal transfer protein TrbD | - |
| GTP13_RS30230 () | 128821..129411 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| GTP13_RS30235 () | 129401..130828 | - | 1428 | WP_106505246.1 | conjugal transfer protein TraB | - |
| GTP13_RS30240 () | 130828..131532 | - | 705 | WP_148936251.1 | type-F conjugative transfer system secretin TraK | - |
| GTP13_RS30245 () | 131543..132109 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| GTP13_RS30250 () | 132131..132442 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| GTP13_RS30255 () | 132457..132822 | - | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| GTP13_RS30260 () | 132865..133080 | - | 216 | WP_024226173.1 | conjugal transfer relaxosome protein TraY | - |
| GTP13_RS30265 () | 133216..133863 | - | 648 | WP_167583044.1 | conjugal transfer transcriptional regulator TraJ | - |
| GTP13_RS30270 () | 134054..134437 | - | 384 | WP_001063020.1 | relaxosome protein TraM | - |
| GTP13_RS30275 () | 134788..135369 | + | 582 | WP_167567406.1 | hypothetical protein | VF |
| GTP13_RS30280 () | 135673..136494 | - | 822 | WP_167583048.1 | DUF945 domain-containing protein | - |
| GTP13_RS30285 () | 136613..136900 | - | 288 | WP_000107542.1 | hypothetical protein | - |
| GTP13_RS31210 () | 136925..137131 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| GTP13_RS30295 () | 137201..137560 | + | 360 | Protein_148 | hypothetical protein | - |
| GTP13_RS30300 () | 137798..137956 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 138021..138219 | - | 199 | NuclAT_0 | - | - |
| - () | 138021..138219 | - | 199 | NuclAT_0 | - | - |
| - () | 138021..138219 | - | 199 | NuclAT_0 | - | - |
| - () | 138021..138219 | - | 199 | NuclAT_0 | - | - |
| GTP13_RS30305 () | 138231..138950 | - | 720 | WP_000116348.1 | plasmid SOS inhibition protein A | - |
| GTP13_RS30310 () | 138947..139381 | - | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| GTP13_RS30315 () | 139436..140296 | - | 861 | Protein_152 | hypothetical protein | - |
| GTP13_RS30320 () | 140383..141129 | - | 747 | WP_053919349.1 | IS21 family transposase ISEc12 | Transposase |
| GTP13_RS30325 () | 141144..142685 | - | 1542 | Protein_154 | IS21 family transposase ISEc12 | Transposase |
| GTP13_RS30330 () | 142871..143980 | - | 1110 | Protein_155 | ParB/RepB/Spo0J family partition protein | - |
| GTP13_RS30335 () | 144046..144279 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| GTP13_RS30340 () | 144336..144875 | - | 540 | WP_000290801.1 | single-stranded DNA-binding protein | - |
| GTP13_RS30345 () | 145355..145708 | + | 354 | WP_057697930.1 | hypothetical protein | - |
| GTP13_RS30350 () | 145678..145869 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| GTP13_RS30355 () | 145866..146288 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| GTP13_RS30360 () | 146335..146637 | - | 303 | WP_072095193.1 | antirestriction protein | - |
| GTP13_RS31215 () | 147211..147987 | - | 777 | WP_001005032.1 | hypothetical protein | - |
| GTP13_RS30375 () | 148033..148587 | - | 555 | Protein_163 | DUF1380 domain-containing protein | - |
| GTP13_RS30380 () | 148481..148702 | - | 222 | WP_001104904.1 | hypothetical protein | - |
| GTP13_RS30385 () | 148703..149386 | - | 684 | WP_000085939.1 | DNA methylase | - |
| GTP13_RS30390 () | 149463..149768 | - | 306 | WP_096317814.1 | hypothetical protein | - |
| GTP13_RS31220 () | 149772..150673 | - | 902 | Protein_167 | DUF1281 domain-containing protein | - |
| GTP13_RS30405 () | 151497..152468 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| GTP13_RS30410 () | 152468..153634 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| GTP13_RS30415 () | 154222..154866 | - | 645 | WP_096245693.1 | replication initiation protein RepE | - |
| GTP13_RS30420 () | 154913..155719 | - | 807 | WP_096245694.1 | site-specific integrase | - |
| GTP13_RS30425 () | 155720..156025 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| GTP13_RS30430 () | 156027..156245 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| GTP13_RS30435 () | 156704..157387 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| GTP13_RS30440 () | 157384..158004 | + | 621 | WP_096317676.1 | hypothetical protein | - |
| GTP13_RS30445 () | 158001..158789 | + | 789 | WP_033561991.1 | DUF2971 domain-containing protein | - |
| GTP13_RS30450 () | 158825..159565 | + | 741 | WP_000933099.1 | abortive infection family protein | - |
| GTP13_RS30455 () | 159724..160389 | - | 666 | WP_053265868.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|