MGE detailed information
MGE type: Prophage MGE length: 82134 bp
Accession: NZ_CP047378 Location: 2382366..2464499 Organism: Escherichia coli strain CAU16175 Replicon: chromosome
Accession: NZ_CP047378 Location: 2382366..2464499 Organism: Escherichia coli strain CAU16175 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTP13_RS11930 () | 2377825..2378664 | + | 840 | WP_001345525.1 | alpha/beta hydrolase | - |
| GTP13_RS11935 () | 2378687..2379529 | + | 843 | WP_000546440.1 | Nif3-like dinuclear metal center hexameric protein | - |
| GTP13_RS11940 () | 2379589..2381031 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| GTP13_RS11945 () | 2381159..2382028 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| GTP13_RS11950 () | 2382366..2383841 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| GTP13_RS11955 () | 2384076..2385887 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| GTP13_RS11960 () | 2385924..2386565 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| GTP13_RS11965 () | 2386621..2387799 | - | 1179 | WP_000173494.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| GTP13_RS11970 () | 2387933..2388175 | + | 243 | WP_096317504.1 | DNA damage-inducible protein YebG | - |
| GTP13_RS11975 () | 2388290..2388646 | + | 357 | WP_001295500.1 | protein YebF | - |
| GTP13_RS11980 () | 2388973..2389632 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| GTP13_RS11985 () | 2389841..2391901 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| GTP13_RS11990 () | 2391898..2392560 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| GTP13_RS11995 () | 2392584..2393240 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| GTP13_RS12000 () | 2393342..2393572 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| GTP13_RS12005 () | 2393711..2394085 | + | 375 | WP_096245560.1 | CopC domain-containing protein YobA | - |
| GTP13_RS12010 () | 2394089..2394961 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| GTP13_RS12015 () | 2394974..2395315 | + | 342 | WP_000976492.1 | YebY family protein | - |
| GTP13_RS12020 () | 2395708..2396784 | - | 1077 | WP_001189085.1 | hypothetical protein ; Integrase | Integrase |
| GTP13_RS12025 () | 2396750..2397031 | - | 282 | WP_097412098.1 | excisionase | - |
| GTP13_RS12030 () | 2397138..2397326 | - | 189 | WP_024177035.1 | DUF1187 family protein | - |
| - () | 2397142..2397320 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 2397142..2397320 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 2397142..2397320 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 2397142..2397320 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| GTP13_RS12035 () | 2397319..2397513 | - | 195 | WP_010989194.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| GTP13_RS12040 () | 2397577..2398629 | - | 1053 | WP_001004413.1 | recombinase RecT | - |
| GTP13_RS12045 () | 2398641..2401790 | - | 3150 | WP_167582685.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| GTP13_RS12050 () | 2401891..2402166 | - | 276 | WP_044805262.1 | hypothetical protein | - |
| GTP13_RS12055 () | 2402241..2402411 | - | 171 | WP_000358365.1 | hypothetical protein | - |
| GTP13_RS12060 () | 2402411..2402632 | - | 222 | WP_000560219.1 | cell division protein FtsZ | - |
| GTP13_RS12065 () | 2403053..2403205 | - | 153 | WP_000379547.1 | DUF1391 family protein | - |
| GTP13_RS12070 () | 2403512..2403931 | - | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| GTP13_RS12075 () | 2404028..2404270 | + | 243 | WP_001033914.1 | helix-turn-helix domain-containing protein | - |
| GTP13_RS12080 () | 2404267..2404689 | + | 423 | WP_044805260.1 | hypothetical protein | - |
| GTP13_RS12085 () | 2404767..2405561 | + | 795 | WP_153781624.1 | hypothetical protein | - |
| GTP13_RS12090 () | 2405568..2406314 | + | 747 | WP_054421928.1 | ATP-binding protein | - |
| GTP13_RS12095 () | 2406337..2407107 | + | 771 | WP_096317508.1 | DUF1627 domain-containing protein | - |
| GTP13_RS12100 () | 2407123..2407545 | + | 423 | WP_044805255.1 | DUF977 family protein | - |
| GTP13_RS12105 () | 2407542..2408015 | + | 474 | WP_000004203.1 | class I SAM-dependent methyltransferase | - |
| GTP13_RS12110 () | 2408160..2408333 | + | 174 | WP_001224676.1 | hypothetical protein | - |
| GTP13_RS12115 () | 2408335..2408511 | + | 177 | WP_000753056.1 | hypothetical protein | - |
| GTP13_RS12120 () | 2408508..2409455 | + | 948 | WP_001289349.1 | ead/Ea22-like family protein | - |
| GTP13_RS12125 () | 2409457..2409635 | + | 179 | Protein_2360 | hypothetical protein | - |
| GTP13_RS12130 () | 2409969..2410478 | + | 510 | WP_096317509.1 | hypothetical protein | - |
| GTP13_RS12135 () | 2410475..2410855 | + | 381 | WP_000610656.1 | DUF551 domain-containing protein | - |
| GTP13_RS12140 () | 2410855..2411250 | + | 396 | WP_000426669.1 | hypothetical protein | - |
| GTP13_RS12145 () | 2411371..2412144 | - | 774 | WP_000200358.1 | KilA-N domain-containing protein | - |
| GTP13_RS12150 () | 2412669..2412821 | + | 153 | WP_001585819.1 | Hok/Gef family protein | - |
| GTP13_RS12160 () | 2413380..2413979 | + | 600 | WP_096317510.1 | DUF1367 family protein | - |
| GTP13_RS12165 () | 2413979..2414269 | + | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| GTP13_RS12170 () | 2414266..2414820 | + | 555 | WP_096317511.1 | DUF1133 family protein | - |
| GTP13_RS12175 () | 2415094..2415675 | + | 582 | WP_000211416.1 | ORF6N domain-containing protein | - |
| GTP13_RS12180 () | 2415918..2416115 | + | 198 | WP_001369585.1 | hypothetical protein | - |
| GTP13_RS12185 () | 2416250..2416963 | + | 714 | WP_096317512.1 | helix-turn-helix domain-containing protein | - |
| GTP13_RS12205 () | 2417415..2417843 | + | 429 | WP_001434745.1 | tellurite resistance TerB family protein | - |
| GTP13_RS12210 () | 2417840..2418095 | + | 256 | Protein_2373 | DUF3927 family protein | - |
| GTP13_RS12215 () | 2418321..2420258 | + | 1938 | WP_096317514.1 | DUF1737 domain-containing protein | - |
| GTP13_RS12220 () | 2420396..2420575 | + | 180 | WP_000143458.1 | DUF1378 family protein | - |
| GTP13_RS12225 () | 2420616..2420861 | + | 246 | WP_001290230.1 | DUF826 domain-containing protein | - |
| GTP13_RS12230 () | 2420939..2421154 | + | 216 | WP_001072901.1 | class II holin family protein | - |
| GTP13_RS12235 () | 2421159..2421692 | + | 534 | WP_000087714.1 | lysozyme | - |
| GTP13_RS12240 () | 2421967..2422536 | + | 570 | WP_001056883.1 | hypothetical protein | - |
| GTP13_RS12245 () | 2422536..2422685 | + | 150 | WP_000455406.1 | hypothetical protein | - |
| GTP13_RS12250 () | 2422913..2423098 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| GTP13_RS12255 () | 2423624..2423938 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| GTP13_RS12260 () | 2424020..2424244 | - | 225 | WP_096317800.1 | YlcI/YnfO family protein | - |
| GTP13_RS12265 () | 2424286..2424651 | + | 366 | WP_000279796.1 | HNH endonuclease | - |
| GTP13_RS12270 () | 2424942..2425505 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| GTP13_RS12275 () | 2425502..2427163 | + | 1662 | WP_052925445.1 | terminase large subunit | - |
| GTP13_RS12280 () | 2427227..2429164 | + | 1938 | WP_167582541.1 | phage major capsid protein | - |
| GTP13_RS12285 () | 2429209..2429430 | + | 222 | WP_001063025.1 | hypothetical protein | - |
| GTP13_RS12290 () | 2429376..2431960 | + | 2585 | Protein_2389 | phage portal protein | - |
| GTP13_RS12295 () | 2431957..2432283 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| GTP13_RS12300 () | 2432294..2432644 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| GTP13_RS12305 () | 2432641..2433087 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| GTP13_RS12310 () | 2433084..2433428 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| GTP13_RS12315 () | 2433494..2434210 | + | 717 | WP_001275471.1 | tail protein | - |
| GTP13_RS12320 () | 2434216..2434590 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| GTP13_RS12325 () | 2434686..2434895 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| GTP13_RS12330 () | 2434947..2438189 | + | 3243 | WP_000212821.1 | phage tail tape measure protein | - |
| GTP13_RS12335 () | 2438182..2438523 | + | 342 | WP_000807964.1 | phage tail protein | - |
| GTP13_RS12340 () | 2438523..2439221 | + | 699 | WP_096954638.1 | phage minor tail protein L | - |
| GTP13_RS12345 () | 2439232..2439975 | + | 744 | WP_167582548.1 | C40 family peptidase | - |
| GTP13_RS12350 () | 2439921..2440553 | + | 633 | WP_123007876.1 | tail assembly protein | - |
| GTP13_RS12355 () | 2440792..2444268 | + | 3477 | WP_167582688.1 | host specificity protein J | - |
| GTP13_RS12360 () | 2444337..2444960 | + | 624 | WP_167582691.1 | hypothetical protein | VF |
| GTP13_RS12365 () | 2445025..2446338 | + | 1314 | WP_167582694.1 | ISNCY family transposase KIS | Transposase |
| GTP13_RS12370 () | 2446340..2446609 | + | 270 | WP_053921583.1 | phage tail fiber C-terminal domain-containing protein | - |
| GTP13_RS12380 () | 2447012..2448025 | + | 1014 | WP_122993102.1 | hypothetical protein | VF |
| - () | 2448593..2448623 | + | 31 | - | - | Toxin Detail |
| - () | 2448593..2448661 | - | 69 | - | - | Antitoxin Detail |
| GTP13_RS12385 () | 2448758..2449414 | + | 657 | WP_167582697.1 | protein-serine/threonine phosphatase | - |
| GTP13_RS12390 () | 2449415..2449606 | - | 192 | WP_001296140.1 | YebW family protein | - |
| GTP13_RS12395 () | 2449711..2449947 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| GTP13_RS12400 () | 2450065..2451504 | - | 1440 | WP_096317597.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| GTP13_RS12405 () | 2451584..2454217 | - | 2634 | WP_001299674.1 | hypothetical protein | VF |
| GTP13_RS12410 () | 2454186..2455469 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| GTP13_RS12415 () | 2455599..2456096 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| GTP13_RS12420 () | 2456193..2456891 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| GTP13_RS12425 () | 2456911..2458959 | + | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| GTP13_RS12430 () | 2459151..2460032 | + | 882 | WP_000984517.1 | protease HtpX | - |
| GTP13_RS12435 () | 2460078..2461451 | - | 1374 | WP_001127210.1 | MFS transporter | - |
| GTP13_RS12440 () | 2461628..2462419 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| GTP13_RS12445 () | 2462562..2462801 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| GTP13_RS12450 () | 2462960..2463103 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| GTP13_RS12455 () | 2463178..2463465 | + | 288 | WP_001006866.1 | YebO family protein | - |
| GTP13_RS12460 () | 2464134..2464277 | + | 144 | WP_001295496.1 | YobF family protein | - |
| GTP13_RS12465 () | 2464290..2464499 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| GTP13_RS12470 () | 2464665..2465474 | + | 810 | WP_000010107.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| GTP13_RS12475 () | 2465471..2466037 | - | 567 | WP_033551495.1 | manganese efflux pump MntP | - |
| GTP13_RS12480 () | 2466466..2466924 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| GTP13_RS12485 () | 2466979..2467830 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| GTP13_RS12490 () | 2467843..2468643 | - | 801 | WP_096854310.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|