MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 172029 bp
Accession: NZ_CP047307 Location: 691445..863473 Organism: Citrobacter freundii strain L75 Replicon: chromosome
Accession: NZ_CP047307 Location: 691445..863473 Organism: Citrobacter freundii strain L75 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJV84_RS03355 () | 687845..688060 | - | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| GJV84_RS03360 () | 688297..689310 | + | 1014 | WP_071684675.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| GJV84_RS03365 () | 689348..689965 | - | 618 | WP_003024692.1 | urease accessory protein UreG | - |
| GJV84_RS03370 () | 689975..690646 | - | 672 | WP_016151002.1 | urease accessory protein UreF | - |
| GJV84_RS03375 () | 690646..691104 | - | 459 | WP_003024684.1 | urease accessory protein UreE | - |
| GJV84_RS03380 () | 691114..692817 | - | 1704 | WP_071684674.1 | urease subunit alpha | - |
| GJV84_RS03385 () | 692810..693130 | - | 321 | WP_003024680.1 | hypothetical protein | VF |
| GJV84_RS03390 () | 693140..693442 | - | 303 | WP_003024678.1 | hypothetical protein | VF |
| GJV84_RS03395 () | 693453..694277 | - | 825 | WP_197731389.1 | urease accessory protein UreD | - |
| GJV84_RS03400 () | 694399..695862 | - | 1464 | WP_032937357.1 | anion permease | - |
| GJV84_RS03405 () | 695911..696516 | - | 606 | WP_044700904.1 | L(+)-tartrate dehydratase subunit beta | - |
| GJV84_RS03410 () | 696513..697421 | - | 909 | WP_016150995.1 | L(+)-tartrate dehydratase subunit alpha | - |
| GJV84_RS03415 () | 697634..698575 | + | 942 | WP_032950138.1 | LysR family transcriptional regulator | - |
| GJV84_RS03420 () | 698607..699224 | - | 618 | WP_003024662.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| GJV84_RS03425 () | 699331..699699 | + | 369 | WP_071684672.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| GJV84_RS03430 () | 699786..700604 | + | 819 | WP_049015216.1 | undecaprenyl-diphosphate phosphatase | - |
| GJV84_RS03435 () | 700702..701943 | - | 1242 | WP_003846299.1 | multifunctional CCA addition/repair protein | - |
| GJV84_RS03440 () | 702005..702625 | - | 621 | WP_071684671.1 | SH3 domain-containing protein | - |
| GJV84_RS03445 () | 702867..704168 | + | 1302 | WP_071684670.1 | inorganic triphosphatase | - |
| GJV84_RS03450 () | 704294..707134 | + | 2841 | WP_071684669.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| GJV84_RS03455 () | 707194..708627 | + | 1434 | WP_071684668.1 | hypothetical protein | VF |
| GJV84_RS03460 () | 708720..710387 | - | 1668 | WP_003838127.1 | flotillin family protein | - |
| GJV84_RS03465 () | 710411..711040 | - | 630 | WP_044713705.1 | DUF1449 family protein | - |
| GJV84_RS03470 () | 711301..711507 | + | 207 | WP_019077704.1 | cell surface composition regulator GlgS | - |
| GJV84_RS03475 () | 711540..711836 | - | 297 | WP_003024618.1 | ubiquinone biosynthesis accessory factor UbiK | - |
| GJV84_RS03480 () | 712225..712878 | + | 654 | WP_003838130.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| GJV84_RS03485 () | 712934..714007 | - | 1074 | WP_071684667.1 | type 1 fimbrial protein | - |
| GJV84_RS03490 () | 714197..715228 | + | 1032 | WP_001752311.1 | IS630 family transposase ISEc33 | Transposase |
| GJV84_RS03495 () | 715234..715890 | - | 657 | WP_159359329.1 | hypothetical protein | VF |
| GJV84_RS03500 () | 715904..718351 | - | 2448 | WP_071684666.1 | hypothetical protein | VF |
| GJV84_RS03505 () | 718419..718982 | - | 564 | WP_049015230.1 | hypothetical protein | VF |
| GJV84_RS03510 () | 719411..720082 | - | 672 | WP_071684665.1 | protein-disulfide oxidoreductase DsbI | - |
| GJV84_RS03515 () | 720097..720765 | - | 669 | WP_003838133.1 | thiol:disulfide interchange protein DsbA/DsbL | - |
| GJV84_RS03520 () | 720789..722585 | - | 1797 | WP_071684664.1 | aryl-sulfate sulfotransferase | - |
| GJV84_RS03525 () | 723225..723998 | - | 774 | WP_003024600.1 | zinc transporter ZupT | - |
| GJV84_RS03530 () | 724146..724934 | + | 789 | WP_003024597.1 | 4,5-DOPA dioxygenase extradiol | - |
| GJV84_RS03535 () | 725020..726180 | - | 1161 | WP_003024594.1 | glutathionylspermidine synthase family protein | - |
| GJV84_RS03540 () | 726186..726863 | - | 678 | WP_003024591.1 | DUF1190 family protein | - |
| GJV84_RS03545 () | 727021..728505 | - | 1485 | WP_032937374.1 | outer membrane channel protein TolC | - |
| GJV84_RS03550 () | 728711..729343 | + | 633 | WP_003024585.1 | ADP-ribose diphosphatase | - |
| GJV84_RS03555 () | 729340..729762 | + | 423 | WP_003024582.1 | DUF1249 family protein | - |
| GJV84_RS03560 () | 729787..730614 | + | 828 | WP_003838143.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| GJV84_RS03565 () | 730614..731195 | + | 582 | WP_003024575.1 | esterase YqiA | - |
| GJV84_RS03570 () | 731224..733116 | + | 1893 | WP_003024571.1 | DNA topoisomerase IV subunit B | - |
| GJV84_RS03575 () | 733157..734008 | - | 852 | WP_044700874.1 | AraC family transcriptional regulator | - |
| GJV84_RS03580 () | 734174..735994 | + | 1821 | WP_071684663.1 | DUF2264 domain-containing protein | - |
| GJV84_RS03585 () | 736005..737273 | + | 1269 | WP_048232794.1 | oligosaccharide MFS transporter | - |
| GJV84_RS03590 () | 737297..738487 | + | 1191 | WP_071684662.1 | glycoside hydrolase family 88 protein | - |
| GJV84_RS03595 () | 738560..738874 | - | 315 | WP_003024557.1 | antibiotic biosynthesis monooxygenase | - |
| GJV84_RS03600 () | 738905..739486 | - | 582 | WP_003838153.1 | NAD(P)H-dependent oxidoreductase | - |
| GJV84_RS03605 () | 739780..740811 | + | 1032 | WP_001752311.1 | IS630 family transposase ISEc33 | Transposase |
| GJV84_RS03610 () | 740894..742086 | + | 1193 | Protein_708 | Hcp family type VI secretion system effector | - |
| GJV84_RS03615 () | 742093..742425 | + | 333 | WP_049002564.1 | DUF2645 family protein | - |
| GJV84_RS03620 () | 742433..743782 | - | 1350 | WP_071684659.1 | two-component system sensor histidine kinase QseC | - |
| GJV84_RS03625 () | 743779..744438 | - | 660 | WP_003024547.1 | hypothetical protein | VF |
| GJV84_RS03630 () | 744589..744987 | + | 399 | WP_003024544.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| GJV84_RS03635 () | 745106..747364 | + | 2259 | WP_003024543.1 | DNA topoisomerase IV subunit A | - |
| GJV84_RS03640 () | 747560..748297 | + | 738 | WP_003024540.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| GJV84_RS03645 () | 748369..749781 | + | 1413 | WP_003024538.1 | cell division protein FtsP | - |
| GJV84_RS03650 () | 749798..751255 | - | 1458 | WP_201450571.1 | TrkH family potassium uptake protein | - |
| GJV84_RS03655 () | 751473..753644 | + | 2172 | WP_003024532.1 | YgiQ family radical SAM protein | - |
| GJV84_RS03660 () | 753748..754203 | - | 456 | WP_003024529.1 | HIT family protein | - |
| GJV84_RS03665 () | 754248..755702 | - | 1455 | WP_016150982.1 | DASS family sodium-coupled anion symporter | - |
| GJV84_RS03670 () | 755891..756718 | - | 828 | WP_003024520.1 | 2,5-didehydrogluconate reductase DkgA | - |
| GJV84_RS03675 () | 756823..757986 | - | 1164 | WP_003838168.1 | alcohol dehydrogenase | - |
| GJV84_RS03680 () | 758181..759080 | + | 900 | WP_003024513.1 | AraC family transcriptional regulator | - |
| GJV84_RS03685 () | 759154..759813 | - | 660 | WP_003024510.1 | DedA family protein | - |
| GJV84_RS03690 () | 759945..761132 | - | 1188 | WP_003024509.1 | cystathionine beta-lyase | - |
| GJV84_RS03695 () | 761383..762117 | + | 735 | WP_003024507.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| GJV84_RS03700 () | 762124..762549 | + | 426 | WP_003024505.1 | TonB system transport protein ExbD | - |
| GJV84_RS03705 () | 762627..763034 | - | 408 | WP_003838178.1 | hypothetical protein | - |
| GJV84_RS03710 () | 763036..763440 | - | 405 | WP_003024501.1 | hypothetical protein | - |
| GJV84_RS03715 () | 763545..764048 | + | 504 | WP_003024499.1 | hypothetical protein | - |
| GJV84_RS03720 () | 764119..765159 | - | 1041 | WP_003024497.1 | aldo/keto reductase | - |
| GJV84_RS03725 () | 765315..766202 | + | 888 | WP_071684655.1 | dienelactone hydrolase family protein | - |
| GJV84_RS03730 () | 766418..768058 | + | 1641 | WP_048217165.1 | hypothetical protein | VF |
| GJV84_RS03735 () | 768143..768430 | + | 288 | WP_003838189.1 | DUF2623 domain-containing protein | - |
| GJV84_RS03740 () | 768619..769737 | + | 1119 | WP_003024486.1 | hydrogenase 2 small subunit | - |
| GJV84_RS03745 () | 769740..770726 | + | 987 | WP_003828357.1 | hydrogenase 2 operon protein HybA | - |
| GJV84_RS03750 () | 770716..771894 | + | 1179 | WP_003024479.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| GJV84_RS03755 () | 771891..773594 | + | 1704 | WP_003024476.1 | hydrogenase 2 large subunit | - |
| GJV84_RS03760 () | 773594..774088 | + | 495 | WP_003024473.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| GJV84_RS03765 () | 774081..774569 | + | 489 | WP_003024465.1 | hydrogenase-2 assembly chaperone | - |
| GJV84_RS03770 () | 774562..774903 | + | 342 | WP_032937396.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| GJV84_RS03775 () | 774934..775182 | + | 249 | WP_003024459.1 | hydrogenase maturation factor HybG | - |
| GJV84_RS03780 () | 775278..776144 | - | 867 | WP_003846344.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| GJV84_RS03785 () | 776362..778650 | + | 2289 | WP_071684654.1 | FdhF/YdeP family oxidoreductase | - |
| GJV84_RS03790 () | 778804..780663 | + | 1860 | WP_003838200.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| GJV84_RS03795 () | 781337..782077 | - | 741 | WP_044713748.1 | N-acetylmuramoyl-L-alanine amidase | - |
| GJV84_RS03800 () | 782230..783345 | - | 1116 | WP_058842388.1 | hypothetical protein | - |
| GJV84_RS03805 () | 783785..783958 | - | 174 | WP_159359330.1 | hypothetical protein | - |
| GJV84_RS03810 () | 784349..784678 | - | 330 | WP_044713752.1 | hypothetical protein | - |
| GJV84_RS03815 () | 784680..785708 | - | 1029 | WP_071684653.1 | PAAR domain-containing protein | - |
| GJV84_RS03820 () | 785743..787719 | - | 1977 | WP_071684652.1 | hypothetical protein | VF |
| GJV84_RS03825 () | 787947..788465 | - | 519 | WP_044713754.1 | hypothetical protein | VF |
| GJV84_RS03830 () | 789131..789640 | + | 510 | WP_044713755.1 | hypothetical protein | VF |
| GJV84_RS03835 () | 789663..791147 | + | 1485 | WP_044713757.1 | hypothetical protein | VF |
| GJV84_RS03840 () | 791153..791578 | + | 426 | WP_044713759.1 | hypothetical protein | VF |
| GJV84_RS03845 () | 791581..793416 | + | 1836 | WP_071684650.1 | hypothetical protein | VF |
| GJV84_RS03850 () | 793383..794429 | + | 1047 | WP_071684649.1 | hypothetical protein | VF |
| GJV84_RS03855 () | 794446..795744 | + | 1299 | WP_071684678.1 | hypothetical protein | VF |
| GJV84_RS03860 () | 795741..796274 | + | 534 | WP_071684648.1 | hypothetical protein | VF |
| GJV84_RS03865 () | 796277..797620 | + | 1344 | WP_159359331.1 | hypothetical protein | VF |
| GJV84_RS03870 () | 797625..798434 | + | 810 | WP_044713767.1 | hypothetical protein | VF |
| GJV84_RS03875 () | 798443..801178 | + | 2736 | WP_071684647.1 | hypothetical protein | VF |
| GJV84_RS03880 () | 801175..801930 | + | 756 | WP_071684646.1 | hypothetical protein | VF |
| GJV84_RS03885 () | 801935..803356 | + | 1422 | WP_071684645.1 | hypothetical protein | VF |
| GJV84_RS03890 () | 803440..806904 | + | 3465 | WP_175542037.1 | hypothetical protein | VF |
| GJV84_RS03895 () | 806915..808282 | + | 1368 | WP_044713776.1 | hypothetical protein | VF |
| GJV84_RS03900 () | 808285..808764 | + | 480 | WP_044713777.1 | hypothetical protein | VF |
| GJV84_RS03905 () | 808965..809822 | - | 858 | WP_159359332.1 | hypothetical protein | - |
| GJV84_RS03910 () | 810236..811014 | + | 779 | Protein_768 | IS5 family transposase IS903B | Transposase |
| GJV84_RS03915 () | 811412..811705 | + | 294 | WP_038917748.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| GJV84_RS03920 () | 811702..812190 | + | 489 | WP_057108449.1 | GNAT family N-acetyltransferase | Toxin Detail |
| GJV84_RS03925 () | 812283..813386 | + | 1104 | WP_064388374.1 | hypothetical protein | - |
| GJV84_RS03930 () | 813662..814151 | - | 490 | Protein_772 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| GJV84_RS03935 () | 814722..816131 | + | 1410 | WP_057108451.1 | N-6 DNA methylase | - |
| GJV84_RS03940 () | 816218..817747 | + | 1530 | WP_057108452.1 | restriction endonuclease subunit S | - |
| GJV84_RS03945 () | 817744..819342 | + | 1599 | WP_057108453.1 | restriction system-associated AAA family ATPase | - |
| GJV84_RS03950 () | 819342..820427 | + | 1086 | WP_057108454.1 | hypothetical protein | - |
| GJV84_RS03955 () | 821068..822275 | + | 1208 | WP_088169078.1 | IS3 family transposase ISEcl1 | Transposase |
| GJV84_RS03960 () | 822969..823082 | - | 114 | Protein_778 | toxin-antitoxin system, antitoxin component | - |
| GJV84_RS03965 () | 823170..823391 | + | 222 | WP_077267911.1 | hypothetical protein | - |
| GJV84_RS03970 () | 823653..823802 | + | 150 | Protein_780 | transposase | - |
| GJV84_RS03975 () | 823994..824602 | + | 609 | WP_064388615.1 | TetR/AcrR family transcriptional regulator | - |
| GJV84_RS03980 () | 824599..825750 | + | 1152 | WP_064388613.1 | efflux RND transporter periplasmic adaptor subunit | - |
| GJV84_RS03985 () | 825747..826952 | + | 1206 | WP_064388612.1 | ABC transporter permease | - |
| GJV84_RS03990 () | 826954..827664 | + | 711 | WP_064388610.1 | hypothetical protein | VF |
| GJV84_RS03995 () | 827693..828166 | + | 474 | WP_064388621.1 | cytochrome c | - |
| GJV84_RS04000 () | 828153..829640 | + | 1488 | WP_064388608.1 | efflux transporter outer membrane subunit | - |
| GJV84_RS04005 () | 829771..830328 | + | 558 | WP_064388619.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| GJV84_RS04010 () | 830331..833303 | + | 2973 | WP_064388606.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| GJV84_RS04015 () | 833337..834428 | - | 1092 | Protein_789 | ABC transporter ATP-binding protein | - |
| GJV84_RS04020 () | 834425..835426 | - | 1002 | Protein_790 | hypothetical protein | VF |
| GJV84_RS04025 () | 835553..836215 | + | 663 | WP_064388602.1 | CerR family C-terminal domain-containing protein | - |
| GJV84_RS04030 () | 836468..836647 | + | 180 | Protein_792 | transcriptional regulator | - |
| GJV84_RS04035 () | 836728..837052 | + | 325 | Protein_793 | helix-turn-helix domain-containing protein | - |
| GJV84_RS04040 () | 837085..837390 | - | 306 | Protein_794 | transposase | - |
| GJV84_RS04045 () | 837385..837963 | + | 579 | Protein_795 | IS66 family transposase ISSgsp1 | Transposase |
| GJV84_RS04050 () | 838002..839176 | - | 1175 | Protein_796 | glycogen/starch/alpha-glucan phosphorylase | - |
| GJV84_RS04055 () | 839565..840845 | - | 1281 | WP_057108459.1 | glucose-1-phosphate adenylyltransferase | - |
| GJV84_RS04060 () | 840991..843159 | - | 2169 | WP_057108458.1 | 1,4-alpha-glucan branching enzyme | - |
| GJV84_RS04065 () | 843644..843793 | - | 150 | WP_159359333.1 | hypothetical protein | - |
| GJV84_RS04070 () | 843916..844137 | - | 222 | WP_077267911.1 | hypothetical protein | - |
| GJV84_RS04075 () | 844225..844338 | + | 114 | Protein_801 | toxin-antitoxin system, antitoxin component | - |
| GJV84_RS04085 () | 846282..847874 | - | 1593 | WP_060589128.1 | IS66 family transposase ISEcl6 | Transposase |
| GJV84_RS04090 () | 847905..848255 | - | 351 | WP_009309933.1 | IS66 family transposase ISEcl6 | Transposase |
| GJV84_RS04095 () | 848252..848656 | - | 405 | WP_009309932.1 | IS66 family transposase ISKox1 | Transposase |
| GJV84_RS04100 () | 849289..849507 | - | 219 | Protein_806 | IS256 family transposase ISSoEn2 | Transposase |
| GJV84_RS04105 () | 849440..849736 | - | 297 | WP_057108462.1 | hypothetical protein | - |
| GJV84_RS04110 () | 850371..850628 | - | 258 | WP_140415848.1 | hypothetical protein | - |
| GJV84_RS04115 () | 850611..851555 | + | 945 | WP_057108463.1 | DUF1738 domain-containing protein | - |
| GJV84_RS04120 () | 851878..852114 | + | 237 | WP_057108464.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| GJV84_RS04125 () | 852117..852431 | + | 315 | WP_057108625.1 | CcdB family protein | Toxin Detail |
| GJV84_RS04130 () | 852428..853180 | - | 753 | WP_064388594.1 | hypothetical protein | - |
| GJV84_RS04135 () | 853189..854925 | - | 1737 | WP_064388593.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GJV84_RS25700 () | 855276..855635 | - | 360 | WP_072146388.1 | hypothetical protein | - |
| GJV84_RS04145 () | 855701..856006 | - | 306 | WP_072146387.1 | dpoa decarboxylase | - |
| GJV84_RS04150 () | 856055..856357 | - | 303 | WP_057108600.1 | conjugal transfer protein | - |
| GJV84_RS04155 () | 856406..856804 | - | 399 | WP_057108599.1 | cag pathogenicity island Cag12 family protein | - |
| GJV84_RS04160 () | 856801..857826 | - | 1026 | WP_064388592.1 | hypothetical protein | VF |
| GJV84_RS04165 () | 857816..859036 | - | 1221 | WP_064388590.1 | hypothetical protein | VF |
| GJV84_RS04170 () | 859056..859961 | - | 906 | WP_064388589.1 | hypothetical protein | VF |
| GJV84_RS04175 () | 859961..860644 | - | 684 | WP_064388587.1 | hypothetical protein | VF |
| GJV84_RS25705 () | 860637..860774 | - | 138 | WP_164887140.1 | hypothetical protein | - |
| GJV84_RS04180 () | 860868..861935 | - | 1068 | WP_064388579.1 | type IV secretion system protein | - |
| GJV84_RS04185 () | 861947..862174 | - | 228 | WP_171847087.1 | EexN family lipoprotein | - |
| GJV84_RS04190 () | 862193..862897 | - | 705 | WP_057108504.1 | type IV secretion system protein | - |
| GJV84_RS04195 () | 862918..865662 | - | 2745 | WP_057108505.1 | VirB3 family type IV secretion system protein | - |
| GJV84_RS04200 () | 865673..865966 | - | 294 | WP_057108506.1 | TrbC/VirB2 family protein | - |
| GJV84_RS04205 () | 865966..866676 | - | 711 | WP_057108507.1 | lytic transglycosylase domain-containing protein | - |
| GJV84_RS04210 () | 866753..866986 | - | 234 | WP_064388616.1 | hypothetical protein | - |
| GJV84_RS04215 () | 867381..867590 | - | 210 | WP_057108508.1 | TraR/DksA family transcriptional regulator | - |
| GJV84_RS04220 () | 867580..868167 | - | 588 | WP_077822678.1 | DUF2857 domain-containing protein | - |
| GJV84_RS04225 () | 868193..868378 | - | 186 | WP_057107840.1 | AlpA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|