MGE detailed information
MGE type: IS/Tn MGE length: 561 bp
Accession: NZ_CP047220 Location: 10078..10638 Organism: Sphingobium yanoikuyae strain YC-JY1 Replicon: plasmid unnamed3
Accession: NZ_CP047220 Location: 10078..10638 Organism: Sphingobium yanoikuyae strain YC-JY1 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GS397_RS26735 () | 5182..5475 | - | 294 | WP_159368253.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GS397_RS26740 () | 5468..5746 | - | 279 | WP_159368254.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| GS397_RS26745 () | 5879..6007 | + | 129 | WP_159368255.1 | hypothetical protein | Toxin Detail |
| GS397_RS26750 () | 5994..6224 | + | 231 | WP_159368256.1 | BrnA antitoxin family protein | Antitoxin Detail |
| GS397_RS26755 () | 6256..6583 | + | 328 | Protein_10 | hypothetical protein | - |
| GS397_RS26760 () | 6626..7018 | - | 393 | Protein_11 | IS66 family insertion sequence element accessory protein TnpB | - |
| GS397_RS26765 () | 6920..8293 | + | 1374 | WP_159368257.1 | hypothetical protein | - |
| GS397_RS26770 () | 8730..9011 | + | 282 | WP_082635049.1 | WGR domain-containing protein | - |
| GS397_RS26775 () | 9026..9121 | - | 96 | Protein_14 | histidine phosphatase family protein | - |
| GS397_RS26780 () | 9139..9432 | - | 294 | WP_159368258.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GS397_RS26785 () | 9420..9698 | - | 279 | WP_159368259.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| GS397_RS26790 () | 10078..10638 | + | 561 | WP_159368303.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| GS397_RS26795 () | 10653..11990 | + | 1338 | WP_159368260.1 | phosphoglucosamine mutase | - |
| GS397_RS26800 () | 12021..12329 | - | 309 | WP_159368261.1 | hypothetical protein | - |
| GS397_RS26805 () | 12326..13582 | - | 1257 | WP_159368262.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|