MGE detailed information
MGE type: Prophage MGE length: 22834 bp
Accession: NZ_CP047171 Location: 446013..468846 Organism: Xylella fastidiosa subsp. fastidiosa strain IVIA5235 Replicon: chromosome
Accession: NZ_CP047171 Location: 446013..468846 Organism: Xylella fastidiosa subsp. fastidiosa strain IVIA5235 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1605_RS01785 () | 441385..443175 | + | 1791 | WP_004089284.1 | succinate dehydrogenase flavoprotein subunit | - |
| D1605_RS01790 () | 443196..443981 | + | 786 | WP_004089282.1 | succinate dehydrogenase iron-sulfur subunit | - |
| D1605_RS01795 () | 444102..444350 | + | 249 | WP_004089280.1 | succinate dehydrogenase assembly factor 2 | - |
| D1605_RS01800 () | 444373..444753 | + | 381 | WP_011097604.1 | hypothetical protein | - |
| D1605_RS01805 () | 444779..446020 | + | 1242 | WP_004089276.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| D1605_RS01810 () | 446013..446735 | + | 723 | WP_004089270.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| D1605_RS01815 () | 447083..449560 | + | 2478 | WP_038231910.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| D1605_RS01820 () | 449545..450207 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| D1605_RS01825 () | 450212..450649 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| D1605_RS01830 () | 450667..452415 | + | 1749 | WP_004089264.1 | lipid A export permease/ATP-binding protein MsbA | - |
| D1605_RS01835 () | 452412..453431 | + | 1020 | WP_004089261.1 | tetraacyldisaccharide 4'-kinase | - |
| D1605_RS01840 () | 453838..454557 | - | 720 | Protein_344 | phage late control D family protein | - |
| D1605_RS01845 () | 454457..455428 | - | 972 | WP_011097609.1 | hypothetical protein | - |
| D1605_RS01850 () | 455436..455993 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| D1605_RS01855 () | 455986..456879 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| D1605_RS01860 () | 456879..457217 | - | 339 | WP_004090694.1 | GPW/gp25 family protein | - |
| D1605_RS01865 () | 457415..457696 | + | 282 | WP_004090695.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D1605_RS01870 () | 457707..457982 | + | 276 | WP_004085172.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| D1605_RS01875 () | 458070..458372 | + | 303 | WP_004090696.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| D1605_RS01880 () | 458375..458776 | + | 402 | WP_004090697.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| D1605_RS01885 () | 458845..459432 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| D1605_RS01890 () | 459429..459971 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| D1605_RS01895 () | 459947..460468 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| D1605_RS01900 () | 460465..460788 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| D1605_RS01905 () | 460788..461048 | - | 261 | WP_011097616.1 | hypothetical protein | - |
| D1605_RS01910 () | 461066..462940 | - | 1875 | WP_011097617.1 | phage major capsid protein | - |
| D1605_RS01915 () | 462937..463569 | - | 633 | WP_011097618.1 | phage portal protein | - |
| D1605_RS01920 () | 463524..464084 | + | 561 | WP_187120450.1 | hypothetical protein | - |
| D1605_RS01925 () | 464081..464359 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| D1605_RS01930 () | 464361..464669 | - | 309 | WP_011097621.1 | hypothetical protein | - |
| D1605_RS01935 () | 464754..466172 | + | 1419 | WP_126709119.1 | DEAD/DEAH box helicase | - |
| D1605_RS01940 () | 466169..466423 | + | 255 | WP_011097623.1 | DUF4224 domain-containing protein | - |
| D1605_RS01945 () | 466413..467432 | + | 1020 | WP_011097624.1 | tyrosine-type recombinase/integrase | - |
| D1605_RS01950 () | 468205..468846 | + | 642 | WP_011097625.1 | ParA family protein | - |
| D1605_RS01955 () | 468874..469350 | + | 477 | WP_004089961.1 | histidine phosphatase family protein | - |
| D1605_RS01960 () | 469355..469927 | + | 573 | WP_011097627.1 | YceI family protein | - |
| D1605_RS01965 () | 469924..471882 | + | 1959 | WP_011097628.1 | phospholipase D family protein | - |
| D1605_RS01970 () | 472815..473204 | - | 390 | WP_004089975.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|