MGE detailed information
MGE type: Prophage MGE length: 73219 bp
Accession: NZ_CP047134 Location: 2005971..2079189 Organism: Xylella fastidiosa subsp. multiplex strain IVIA5901 Replicon: chromosome
Accession: NZ_CP047134 Location: 2005971..2079189 Organism: Xylella fastidiosa subsp. multiplex strain IVIA5901 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DVT08_RS09010 () | 2002077..2002598 | + | 522 | WP_004086617.1 | disulfide bond formation protein B | - |
| DVT08_RS09015 () | 2002968..2005754 | - | 2787 | WP_128283935.1 | TonB-dependent receptor | - |
| DVT08_RS09020 () | 2005971..2006444 | + | 474 | WP_004086621.1 | 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH | - |
| DVT08_RS09025 () | 2007056..2007248 | - | 193 | Protein_1760 | hypothetical protein | - |
| DVT08_RS09030 () | 2007614..2007844 | - | 231 | WP_049756319.1 | hypothetical protein | - |
| DVT08_RS09035 () | 2008063..2008242 | - | 180 | WP_021358388.1 | hypothetical protein | - |
| DVT08_RS09040 () | 2008830..2009174 | + | 345 | Protein_1763 | helix-turn-helix transcriptional regulator | - |
| DVT08_RS09045 () | 2009217..2009711 | + | 495 | WP_012338054.1 | hypothetical protein | - |
| DVT08_RS09050 () | 2010124..2011125 | - | 1002 | Protein_1765 | IS607 family transposase ISCARN56 | Transposase |
| DVT08_RS09055 () | 2011119..2011379 | - | 261 | Protein_1766 | IS607 family transposase ISChh1 | Transposase |
| DVT08_RS09060 () | 2011412..2011846 | + | 435 | WP_004085904.1 | hypothetical protein | - |
| DVT08_RS09065 () | 2012270..2013026 | + | 757 | Protein_1768 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DVT08_RS09070 () | 2013000..2013155 | - | 156 | Protein_1769 | helix-turn-helix domain-containing protein | - |
| DVT08_RS09075 () | 2013189..2013446 | - | 258 | Protein_1770 | DNA adenine methylase | - |
| DVT08_RS09080 () | 2013452..2014424 | - | 973 | Protein_1771 | peptidase | - |
| DVT08_RS09085 () | 2014903..2015808 | - | 906 | WP_038211728.1 | peptidase | - |
| DVT08_RS09090 () | 2016268..2017431 | - | 1164 | WP_187120394.1 | phage tail protein | - |
| DVT08_RS09095 () | 2017435..2017995 | - | 561 | WP_004084996.1 | DUF2612 domain-containing protein | - |
| DVT08_RS09100 () | 2017992..2019137 | - | 1146 | WP_128283772.1 | baseplate J/gp47 family protein | - |
| DVT08_RS09105 () | 2019240..2019536 | + | 297 | WP_004085590.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DVT08_RS09110 () | 2019539..2019832 | + | 294 | WP_004085592.1 | putative addiction module antidote protein | Antitoxin Detail |
| DVT08_RS09115 () | 2019888..2020241 | - | 354 | WP_004084998.1 | hypothetical protein | - |
| DVT08_RS09120 () | 2020238..2020879 | - | 642 | WP_012382583.1 | hypothetical protein | - |
| DVT08_RS09125 () | 2020876..2021706 | - | 831 | WP_004085594.1 | hypothetical protein | - |
| DVT08_RS09130 () | 2021703..2022020 | - | 318 | WP_004085001.1 | hypothetical protein | - |
| DVT08_RS09135 () | 2022020..2022790 | - | 771 | WP_128283773.1 | hypothetical protein | - |
| DVT08_RS09140 () | 2022901..2023128 | + | 228 | WP_004091377.1 | hypothetical protein | Antitoxin Detail |
| DVT08_RS09145 () | 2023112..2023378 | + | 267 | WP_004087087.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DVT08_RS09150 () | 2023389..2025278 | - | 1890 | WP_187120430.1 | hypothetical protein | - |
| DVT08_RS09155 () | 2025426..2025848 | - | 423 | WP_128283793.1 | hypothetical protein | - |
| DVT08_RS09160 () | 2025845..2026281 | - | 437 | Protein_1787 | DUF3277 family protein | - |
| DVT08_RS09165 () | 2026291..2027787 | - | 1497 | WP_128283792.1 | DUF3383 domain-containing protein | - |
| DVT08_RS09170 () | 2027788..2028320 | - | 533 | Protein_1789 | hypothetical protein | - |
| DVT08_RS09175 () | 2028244..2028624 | - | 381 | WP_181008164.1 | hypothetical protein | - |
| DVT08_RS09180 () | 2028599..2029078 | - | 480 | WP_004085009.1 | hypothetical protein | - |
| DVT08_RS09185 () | 2029075..2029446 | - | 372 | WP_004085010.1 | DUF4054 domain-containing protein | - |
| DVT08_RS09190 () | 2029449..2029748 | - | 300 | WP_012382591.1 | hypothetical protein | - |
| DVT08_RS09195 () | 2029811..2030795 | - | 985 | Protein_1794 | DUF2184 domain-containing protein | - |
| DVT08_RS09200 () | 2030805..2031287 | - | 483 | WP_004085013.1 | hypothetical protein | - |
| DVT08_RS09205 () | 2031297..2032505 | - | 1209 | WP_187120395.1 | DUF2213 domain-containing protein | - |
| DVT08_RS09210 () | 2032505..2033350 | - | 846 | WP_004087067.1 | phage head morphogenesis protein | - |
| DVT08_RS09215 () | 2033355..2034695 | - | 1341 | Protein_1798 | DUF1073 domain-containing protein | - |
| DVT08_RS09220 () | 2034692..2036242 | - | 1551 | WP_020851957.1 | phage terminase large subunit | - |
| DVT08_RS09225 () | 2036193..2036591 | - | 399 | WP_004086920.1 | hypothetical protein | - |
| DVT08_RS09230 () | 2036683..2036895 | - | 213 | WP_128382972.1 | hypothetical protein | - |
| DVT08_RS09235 () | 2036897..2037358 | - | 462 | WP_128382971.1 | hypothetical protein | - |
| DVT08_RS09240 () | 2037348..2037677 | - | 330 | WP_004086918.1 | phage holin family protein | - |
| DVT08_RS09245 () | 2037670..2038170 | - | 501 | WP_128283730.1 | lysozyme | - |
| DVT08_RS09250 () | 2038344..2039042 | - | 699 | WP_004086916.1 | hypothetical protein | - |
| DVT08_RS09255 () | 2039171..2039575 | - | 405 | WP_187120396.1 | hypothetical protein | - |
| DVT08_RS09260 () | 2039581..2041041 | - | 1461 | WP_128283779.1 | replicative DNA helicase | - |
| DVT08_RS09265 () | 2041038..2041886 | - | 849 | WP_128283780.1 | hypothetical protein | - |
| DVT08_RS09270 () | 2041888..2042166 | - | 279 | WP_128283781.1 | hypothetical protein | - |
| DVT08_RS09275 () | 2042145..2043257 | - | 1113 | WP_128283787.1 | Bro-N domain-containing protein | - |
| DVT08_RS09280 () | 2043460..2043843 | - | 384 | WP_128283782.1 | hypothetical protein | - |
| DVT08_RS09285 () | 2043840..2044088 | - | 249 | WP_128283783.1 | hypothetical protein | - |
| DVT08_RS09290 () | 2044085..2044273 | - | 189 | WP_004086874.1 | hypothetical protein | - |
| DVT08_RS09295 () | 2044301..2044450 | - | 150 | WP_154123798.1 | hypothetical protein | - |
| DVT08_RS09300 () | 2044703..2045008 | - | 306 | WP_038231486.1 | helix-turn-helix domain-containing protein | - |
| DVT08_RS09305 () | 2045091..2045543 | + | 453 | WP_011098226.1 | hypothetical protein | - |
| DVT08_RS09310 () | 2045677..2046216 | + | 540 | WP_004086908.1 | hypothetical protein | - |
| DVT08_RS09315 () | 2046239..2046529 | + | 291 | WP_004086345.1 | nucleotidyltransferase | - |
| DVT08_RS09320 () | 2046526..2046894 | + | 369 | WP_004086346.1 | DUF86 domain-containing protein | - |
| DVT08_RS09325 () | 2047140..2047490 | + | 351 | WP_004086360.1 | hypothetical protein | - |
| DVT08_RS09330 () | 2047776..2048231 | + | 456 | WP_004086362.1 | hypothetical protein | - |
| DVT08_RS09335 () | 2048342..2048779 | + | 438 | WP_038231390.1 | hypothetical protein | - |
| DVT08_RS09340 () | 2048776..2049246 | + | 471 | WP_128283784.1 | DUF1566 domain-containing protein | - |
| DVT08_RS09345 () | 2049243..2049644 | + | 402 | WP_128283785.1 | hypothetical protein | - |
| DVT08_RS09350 () | 2049641..2049832 | + | 192 | WP_128283786.1 | hypothetical protein | - |
| DVT08_RS09355 () | 2049856..2050047 | + | 192 | WP_038233160.1 | hypothetical protein | - |
| DVT08_RS09360 () | 2050079..2050273 | + | 195 | WP_004086187.1 | hypothetical protein | - |
| DVT08_RS09365 () | 2050331..2050762 | + | 432 | WP_187120397.1 | hypothetical protein | - |
| DVT08_RS09370 () | 2050759..2052036 | + | 1278 | WP_187120398.1 | DUF2800 domain-containing protein | - |
| DVT08_RS09375 () | 2052036..2052602 | + | 567 | WP_128382959.1 | DUF2815 family protein | - |
| DVT08_RS09380 () | 2052689..2053840 | + | 1152 | WP_154195307.1 | hypothetical protein | - |
| DVT08_RS09385 () | 2053842..2056022 | + | 2181 | WP_187120399.1 | DNA polymerase | - |
| DVT08_RS09390 () | 2056019..2056297 | + | 279 | WP_004085028.1 | VRR-NUC domain-containing protein | - |
| DVT08_RS09395 () | 2056299..2056682 | - | 384 | WP_128283712.1 | DUF1640 domain-containing protein | - |
| DVT08_RS09400 () | 2056767..2058185 | + | 1419 | WP_187120400.1 | DEAD/DEAH box helicase | - |
| DVT08_RS09405 () | 2058409..2058732 | + | 324 | WP_038230907.1 | helix-turn-helix domain-containing protein | - |
| DVT08_RS09410 () | 2059104..2059637 | + | 534 | Protein_1837 | site-specific integrase | - |
| DVT08_RS09420 () | 2059864..2061873 | - | 2010 | WP_004086393.1 | excinuclease ABC subunit UvrB | - |
| DVT08_RS09425 () | 2062028..2062615 | + | 588 | WP_004086395.1 | Tfp pilus assembly protein FimT/FimU | - |
| DVT08_RS09430 () | 2063079..2063585 | - | 507 | WP_004086396.1 | hypothetical protein | - |
| DVT08_RS09435 () | 2063605..2064513 | - | 909 | WP_031345869.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| DVT08_RS09440 () | 2064666..2065241 | + | 576 | WP_011098233.1 | glycine cleavage system protein R | - |
| DVT08_RS09445 () | 2065288..2065767 | + | 480 | WP_004086402.1 | peroxiredoxin | - |
| DVT08_RS09450 () | 2065833..2067234 | + | 1402 | Protein_1844 | PhoH family protein | - |
| DVT08_RS09455 () | 2067604..2067828 | - | 225 | WP_004086512.1 | hypothetical protein | - |
| DVT08_RS09460 () | 2067825..2068124 | - | 300 | WP_128283832.1 | hypothetical protein | - |
| DVT08_RS09465 () | 2068538..2069512 | - | 975 | WP_012338057.1 | thiamine-phosphate kinase | - |
| DVT08_RS09470 () | 2069603..2070076 | - | 474 | WP_004086409.1 | transcription antitermination factor NusB | - |
| DVT08_RS09475 () | 2070073..2070537 | - | 465 | WP_004086411.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| DVT08_RS09480 () | 2070568..2071701 | - | 1134 | WP_004086413.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| DVT08_RS09485 () | 2071698..2072300 | - | 603 | WP_004086415.1 | riboflavin synthase | - |
| DVT08_RS09490 () | 2072415..2072591 | + | 177 | WP_154159312.1 | hypothetical protein | - |
| DVT08_RS09495 () | 2072888..2073982 | - | 1095 | WP_004086417.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| DVT08_RS09500 () | 2074401..2074946 | - | 546 | WP_004086418.1 | transcriptional regulator NrdR | - |
| DVT08_RS09505 () | 2075016..2075471 | - | 456 | WP_004086496.1 | hypothetical protein | - |
| DVT08_RS09510 () | 2075590..2076843 | - | 1254 | WP_027700513.1 | serine hydroxymethyltransferase | - |
| DVT08_RS09515 () | 2077525..2079189 | + | 1665 | WP_004086422.1 | energy-dependent translational throttle protein EttA | - |
| DVT08_RS09520 () | 2079742..2081430 | + | 1689 | WP_004086424.1 | malate dehydrogenase (quinone) | - |
| DVT08_RS09525 () | 2081595..2082029 | - | 435 | WP_004086425.1 | thiol-disulfide oxidoreductase DCC family protein | - |
| DVT08_RS09530 () | 2082275..2082505 | + | 231 | WP_153187170.1 | hypothetical protein | - |
| DVT08_RS09535 () | 2082502..2083284 | - | 783 | WP_004086427.1 | peptidoglycan editing factor PgeF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|