MGE detailed information
MGE type: Conjugative plasmid MGE length: 101644 bp
Accession: NZ_CP047012 Location: 1..101644 Organism: Escherichia coli strain 19-5 Replicon: plasmid pCMY-2
Accession: NZ_CP047012 Location: 1..101644 Organism: Escherichia coli strain 19-5 Replicon: plasmid pCMY-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQF95_RS23815 (46) | 46..1077 | + | 1032 | WP_000907873.1 | plasmid replication initiator RepA | - |
| GQF95_RS23820 (1773) | 1773..1931 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| GQF95_RS23825 (1986) | 1986..2255 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| GQF95_RS23830 (2255) | 2255..2533 | + | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| GQF95_RS23835 (2573) | 2573..3421 | + | 849 | WP_001057991.1 | 3'-5' exonuclease | - |
| GQF95_RS23840 (3538) | 3538..4011 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| GQF95_RS23845 (4488) | 4488..4754 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| GQF95_RS23850 (4754) | 4754..5248 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| GQF95_RS23855 (5304) | 5304..5906 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| GQF95_RS23860 (6260) | 6260..7144 | + | 885 | Protein_9 | protein YagA | - |
| GQF95_RS23865 (7327) | 7327..8589 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| GQF95_RS23870 (8913) | 8913..10058 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| GQF95_RS23875 (10152) | 10152..10685 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| GQF95_RS23880 (10682) | 10682..10999 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| GQF95_RS23885 (11051) | 11051..11521 | + | 471 | Protein_14 | protein YagA | - |
| GQF95_RS23890 (11800) | 11800..13680 | + | 1881 | WP_001283341.1 | colicin Ia central receptor-binding domain-containing protein | - |
| GQF95_RS23895 (13698) | 13698..14045 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| GQF95_RS23900 (14164) | 14164..14511 | + | 348 | WP_000142436.1 | DUF6404 family protein | - |
| GQF95_RS23905 (14529) | 14529..15119 | - | 591 | WP_000194550.1 | hypothetical protein | - |
| GQF95_RS23910 (15119) | 15119..15373 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| GQF95_RS23915 (15505) | 15505..15720 | + | 216 | WP_165848872.1 | hypothetical protein | - |
| GQF95_RS23920 (15725) | 15725..16726 | + | 1002 | WP_000774875.1 | DUF4238 domain-containing protein | - |
| GQF95_RS23925 (16902) | 16902..17246 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| GQF95_RS23930 (17745) | 17745..17999 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| GQF95_RS23935 (18044) | 18044..18970 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| GQF95_RS23940 (19528) | 19528..19746 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| GQF95_RS23945 (19748) | 19748..20053 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| GQF95_RS23950 (20054) | 20054..20860 | + | 807 | WP_000016969.1 | site-specific integrase | - |
| GQF95_RS23955 (21040) | 21040..21684 | + | 645 | WP_001144036.1 | ParA family protein | - |
| GQF95_RS23960 (21771) | 21771..22079 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| GQF95_RS23965 (22493) | 22493..23473 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| GQF95_RS23970 (23466) | 23466..23882 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| GQF95_RS23975 (23884) | 23884..25158 | - | 1275 | WP_000457493.1 | Y-family DNA polymerase | - |
| GQF95_RS23980 (25158) | 25158..25595 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GQF95_RS23985 (25592) | 25592..25840 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| GQF95_RS23990 (26258) | 26258..27160 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| GQF95_RS23995 (27157) | 27157..27468 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| GQF95_RS24000 (27545) | 27545..28228 | + | 684 | WP_000086178.1 | DNA methylase | - |
| GQF95_RS24005 (28229) | 28229..28450 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| GQF95_RS24010 (28410) | 28410..28896 | + | 487 | Protein_39 | DUF1380 family protein | - |
| GQF95_RS24015 (28947) | 28947..29717 | + | 771 | WP_024133193.1 | hypothetical protein | - |
| GQF95_RS24020 (30135) | 30135..30560 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| GQF95_RS24025 (30607) | 30607..31029 | + | 423 | WP_000271725.1 | DUF1380 family protein | - |
| GQF95_RS24030 (31026) | 31026..31217 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| GQF95_RS26090 (31288) | 31288..31635 | + | 348 | WP_001303314.1 | hypothetical protein | - |
| GQF95_RS24040 (31987) | 31987..32514 | + | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| GQF95_RS24045 (32572) | 32572..32805 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| GQF95_RS24050 (32864) | 32864..34822 | + | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| GQF95_RS24055 (34877) | 34877..35311 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| GQF95_RS24060 (35308) | 35308..36027 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| GQF95_RS24065 (36157) | 36157..37332 | + | 1176 | WP_000942657.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| GQF95_RS24070 (37779) | 37779..38279 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| GQF95_RS24075 (39008) | 39008..39442 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| GQF95_RS24080 (39536) | 39536..39802 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| GQF95_RS24085 (39867) | 39867..40769 | + | 903 | WP_000038404.1 | Recombination-promoting nuclease RpnA | VF |
| GQF95_RS24090 (40769) | 40769..41050 | + | 282 | WP_001334682.1 | hypothetical protein | VF |
| GQF95_RS24095 (41081) | 41081..41332 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| GQF95_RS24100 (41913) | 41913..42761 | + | 849 | WP_001077027.1 | DUF4942 domain-containing protein | - |
| GQF95_RS24105 (42847) | 42847..43182 | - | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| GQF95_RS24110 (43416) | 43416..43748 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| GQF95_RS24115 (43759) | 43759..46458 | + | 2700 | WP_001474686.1 | Protein TraI | Relaxase |
| GQF95_RS24120 (46495) | 46495..48786 | - | 2292 | WP_001289271.1 | F-type conjugative transfer protein TrbC | - |
| GQF95_RS24125 (48779) | 48779..49849 | - | 1071 | WP_000151575.1 | IncI1-type conjugal transfer protein TrbB | - |
| GQF95_RS24130 (49868) | 49868..51076 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (51256) | 51256..51318 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (51256) | 51256..51318 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (51256) | 51256..51318 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (51256) | 51256..51318 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| GQF95_RS24135 (51368) | 51368..51520 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| GQF95_RS24140 (51592) | 51592..51843 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| GQF95_RS24145 (52204) | 52204..52986 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| GQF95_RS24150 (52983) | 52983..54005 | - | 1023 | WP_001572805.1 | IS21 family transposase IS100kyp | Transposase |
| - (54189) | 54189..54240 | - | 52 | NuclAT_1 | - | - |
| - (54189) | 54189..54240 | - | 52 | NuclAT_1 | - | - |
| - (54189) | 54189..54240 | - | 52 | NuclAT_1 | - | - |
| - (54189) | 54189..54240 | - | 52 | NuclAT_1 | - | - |
| GQF95_RS24155 (54726) | 54726..54902 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| GQF95_RS24160 (55294) | 55294..55503 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| GQF95_RS24165 (55575) | 55575..56237 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| GQF95_RS24170 (56308) | 56308..58476 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| GQF95_RS24175 (58573) | 58573..59157 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| GQF95_RS24180 (59186) | 59186..60388 | - | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| GQF95_RS24185 (60355) | 60355..60969 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| GQF95_RS24190 (60969) | 60969..64013 | - | 3045 | WP_001024751.1 | IncI1-type conjugal transfer protein TraU | - |
| GQF95_RS24195 (64103) | 64103..64903 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| GQF95_RS24200 (64887) | 64887..65075 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| GQF95_RS24205 (65139) | 65139..65543 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| GQF95_RS24210 (65594) | 65594..66121 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| GQF95_RS24215 (66121) | 66121..66825 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| GQF95_RS24220 (66825) | 66825..68114 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| GQF95_RS24225 (68117) | 68117..69100 | - | 984 | WP_001191878.1 | hypothetical protein | VF |
| GQF95_RS24230 (69111) | 69111..69803 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| GQF95_RS24235 (69800) | 69800..70147 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| GQF95_RS24240 (70165) | 70165..73932 | - | 3768 | WP_001141535.1 | DUF5710 domain-containing protein | - |
| GQF95_RS24245 (74022) | 74022..74573 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| GQF95_RS24250 (74588) | 74588..74878 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| GQF95_RS24255 (74875) | 74875..76023 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| GQF95_RS24260 (76020) | 76020..76838 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| GQF95_RS24265 (76835) | 76835..77293 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| GQF95_RS24270 (77688) | 77688..78272 | - | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| GQF95_RS24275 (78332) | 78332..79534 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| GQF95_RS24280 (79620) | 79620..80444 | - | 825 | WP_001238927.1 | conjugal transfer protein TraE | - |
| GQF95_RS24285 (80595) | 80595..81749 | - | 1155 | WP_001139958.1 | site-specific integrase | - |
| GQF95_RS24295 (82553) | 82553..83977 | - | 1425 | WP_023278060.1 | hypothetical protein | VF |
| GQF95_RS24300 (83977) | 83977..84633 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| GQF95_RS24305 (84618) | 84618..85178 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| GQF95_RS24310 (85188) | 85188..85802 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| GQF95_RS24315 (85820) | 85820..86917 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| GQF95_RS24320 (86930) | 86930..88483 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| GQF95_RS24325 (88494) | 88494..88946 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| GQF95_RS24330 (88933) | 88933..90228 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| GQF95_RS24335 (90371) | 90371..91126 | - | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| GQF95_RS24340 (91143) | 91143..92678 | - | 1536 | WP_023181050.1 | IS21 family transposase ISSso4 | Transposase |
| GQF95_RS24345 (92860) | 92860..94548 | - | 1689 | WP_212483552.1 | Outer membrane lipoprotein BfpB | VF |
| GQF95_RS24350 (94562) | 94562..94999 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| GQF95_RS24355 (94999) | 94999..96066 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| GQF95_RS24360 (96740) | 96740..97192 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| GQF95_RS24365 (97235) | 97235..97489 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| GQF95_RS24370 (97757) | 97757..98323 | - | 567 | WP_000776428.1 | protein TraD | - |
| GQF95_RS24375 (98337) | 98337..99020 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| GQF95_RS24380 (99274) | 99274..99807 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| GQF95_RS24385 (100249) | 100249..100536 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| GQF95_RS24390 (100454) | 100454..100684 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|