MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 116304 bp
Accession: NZ_CP047003 Location: 1..116304 Organism: Escherichia coli strain J-8 Replicon: plasmid pTEM
Accession: NZ_CP047003 Location: 1..116304 Organism: Escherichia coli strain J-8 Replicon: plasmid pTEM
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQF94_RS22995 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| GQF94_RS23000 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| GQF94_RS23005 (2124) | 2124..2312 | - | 189 | WP_001312821.1 | hypothetical protein | - |
| GQF94_RS23010 (2686) | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| GQF94_RS23015 (3657) | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| GQF94_RS23020 (5199) | 5199..6152 | - | 954 | WP_000280980.1 | hypothetical protein | VF |
| GQF94_RS23025 (7449) | 7449..7628 | - | 180 | Protein_6 | integrase core domain-containing protein | - |
| GQF94_RS23030 (7767) | 7767..8506 | + | 740 | Protein_7 | IS3 family transposase IS629 | Transposase |
| GQF94_RS23035 (8869) | 8869..9138 | + | 270 | WP_212040653.1 | hypothetical protein | - |
| GQF94_RS23040 (9177) | 9177..10679 | + | 1503 | Protein_9 | group II intron reverse transcriptase/maturase | - |
| GQF94_RS23045 (10763) | 10763..11242 | + | 480 | Protein_10 | IS3 family transposase IS629 | Transposase |
| GQF94_RS23050 (11390) | 11390..11658 | - | 269 | Protein_11 | IS3 family transposase ISLad1 | Transposase |
| GQF94_RS23055 (11715) | 11715..12412 | + | 698 | WP_224158172.1 | IS1-like element IS1A family transposase | - |
| GQF94_RS23060 (12490) | 12490..13879 | - | 1390 | Protein_13 | ISNCY family transposase ISKpn21 | Transposase |
| GQF94_RS23065 (13967) | 13967..14671 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GQF94_RS23070 (14723) | 14723..15918 | - | 1196 | Protein_15 | IS21 family transposase ISEc12 | Transposase |
| - (16280) | 16280..16341 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (16280) | 16280..16341 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (16280) | 16280..16341 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (16280) | 16280..16341 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| GQF94_RS23075 (16385) | 16385..16534 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| GQF94_RS23080 (16818) | 16818..17075 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| GQF94_RS25430 (17092) | 17092..17343 | - | 252 | WP_223195197.1 | replication protein RepA | - |
| GQF94_RS25435 (17334) | 17334..17381 | + | 48 | WP_229471593.1 | hypothetical protein | - |
| GQF94_RS23090 (17374) | 17374..17856 | + | 483 | WP_001273588.1 | hypothetical protein | - |
| GQF94_RS23095 (17849) | 17849..18706 | + | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| GQF94_RS23100 (19648) | 19648..20301 | + | 654 | WP_064055666.1 | CPBP family intramembrane metalloprotease | - |
| GQF94_RS23105 (20394) | 20394..20651 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| GQF94_RS23110 (20584) | 20584..20985 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| GQF94_RS23115 (21270) | 21270..22580 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| GQF94_RS23120 (22609) | 22609..22707 | + | 99 | Protein_26 | IS1 family transposase | - |
| GQF94_RS23125 (22857) | 22857..23718 | - | 862 | Protein_27 | hypothetical protein | ARG |
| GQF94_RS23130 (24021) | 24021..24725 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GQF94_RS23135 (25071) | 25071..25220 | - | 150 | Protein_29 | IS3 family transposase IS2 | Transposase |
| GQF94_RS23140 (25398) | 25398..26591 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| GQF94_RS23145 (27814) | 27814..29050 | - | 1237 | Protein_31 | IS3 family transposase IS2 | Transposase |
| GQF94_RS23150 (29677) | 29677..29970 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| GQF94_RS23155 (30028) | 30028..30227 | - | 200 | Protein_33 | lysis protein | - |
| GQF94_RS23160 (30781) | 30781..31807 | + | 1027 | Protein_34 | IS481 family transposase ISKpn28 | Transposase |
| GQF94_RS23165 (33118) | 33118..34233 | + | 1116 | WP_001318220.1 | hypothetical protein | VF |
| GQF94_RS23170 (34373) | 34373..38032 | + | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
| GQF94_RS23175 (38136) | 38136..39365 | + | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
| GQF94_RS23180 (39450) | 39450..40406 | + | 957 | WP_064055648.1 | Ferri-bacillibactin esterase BesA | VF |
| GQF94_RS23185 (40451) | 40451..42628 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| GQF94_RS23190 (42863) | 42863..43560 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| GQF94_RS23195 (43577) | 43577..43774 | - | 198 | Protein_41 | colicin V | - |
| GQF94_RS23200 (43752) | 43752..43988 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| GQF94_RS23205 (44530) | 44530..44733 | - | 204 | Protein_43 | hypothetical protein | - |
| GQF94_RS23210 (44906) | 44906..45073 | + | 168 | Protein_44 | colicin-B | - |
| GQF94_RS23215 (45091) | 45091..45618 | - | 528 | WP_000203272.1 | colicin B immunity protein | - |
| GQF94_RS23220 (45862) | 45862..46677 | + | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| GQF94_RS23225 (46727) | 46727..47080 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| GQF94_RS23230 (47258) | 47258..48049 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| GQF94_RS23235 (48046) | 48046..48735 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| GQF94_RS23240 (48779) | 48779..49129 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| GQF94_RS23245 (49661) | 49661..53476 | - | 3816 | WP_223364258.1 | hypothetical protein | - |
| GQF94_RS23250 (53702) | 53702..53887 | + | 186 | Protein_52 | hypothetical protein | - |
| GQF94_RS23255 (53905) | 53905..54252 | - | 348 | WP_000142450.1 | DUF6404 family protein | - |
| GQF94_RS23260 (54554) | 54554..55036 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| GQF94_RS23265 (55153) | 55153..56001 | - | 849 | WP_023154360.1 | 3'-5' exonuclease | - |
| GQF94_RS23270 (56047) | 56047..56325 | - | 279 | WP_097309154.1 | type II toxin-antitoxin system toxin YacB | - |
| GQF94_RS23280 (56435) | 56435..57151 | - | 717 | Protein_57 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| GQF94_RS23285 (57185) | 57185..58479 | - | 1295 | Protein_58 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GQF94_RS23290 (58547) | 58547..59250 | + | 704 | Protein_59 | IS6-like element IS26 family transposase | - |
| GQF94_RS23295 (59444) | 59444..59830 | + | 387 | WP_063102497.1 | bleomycin binding protein | - |
| GQF94_RS23300 (60150) | 60150..60542 | - | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| GQF94_RS23305 (60877) | 60877..61581 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GQF94_RS23310 (61901) | 61901..63076 | + | 1176 | WP_002914189.1 | Efflux pump periplasmic linker BepF | VF |
| GQF94_RS23315 (63100) | 63100..66252 | + | 3153 | WP_000347934.1 | Efflux pump membrane transporter BepE | VF |
| GQF94_RS23320 (66322) | 66322..66801 | - | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| GQF94_RS23325 (66903) | 66903..67607 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GQF94_RS23330 (67671) | 67671..67940 | - | 270 | Protein_67 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| GQF94_RS23335 (68066) | 68066..68416 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| GQF94_RS23340 (68619) | 68619..69632 | - | 1014 | WP_000845039.1 | class 1 integron integrase IntI1 | - |
| GQF94_RS23345 (69777) | 69777..70274 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| GQF94_RS23350 (70386) | 70386..70676 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| GQF94_RS23355 (70682) | 70682..71520 | + | 839 | Protein_72 | Streptomycin 3''-adenylyltransferase | ARG |
| GQF94_RS23360 (71637) | 71637..71720 | + | 84 | Protein_73 | SMR family transporter | - |
| GQF94_RS23365 (71778) | 71778..72482 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GQF94_RS23370 (72593) | 72593..73843 | + | 1251 | Protein_75 | transposase | - |
| GQF94_RS23375 (73908) | 73908..74612 | + | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| GQF94_RS23380 (74802) | 74802..75617 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| GQF94_RS23385 (75768) | 75768..76472 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GQF94_RS23390 (76594) | 76594..77499 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| GQF94_RS23395 (77496) | 77496..78734 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| GQF94_RS23400 (78734) | 78734..79318 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| GQF94_RS23405 (79811) | 79811..80575 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| GQF94_RS23410 (80704) | 80704..81408 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GQF94_RS25440 (81496) | 81496..81579 | - | 84 | Protein_84 | hypothetical protein | - |
| GQF94_RS23415 (81694) | 81694..81852 | + | 159 | Protein_85 | chromate resistance protein | - |
| GQF94_RS23420 (82480) | 82480..83851 | - | 1372 | Protein_86 | IS1182 family transposase ISCfr1 | Transposase |
| GQF94_RS23425 (83966) | 83966..85102 | - | 1137 | WP_000080860.1 | DUF3883 domain-containing protein | - |
| GQF94_RS23430 (85153) | 85153..85380 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| GQF94_RS23435 (85404) | 85404..85595 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| GQF94_RS23440 (86077) | 86077..86619 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| GQF94_RS23445 (86632) | 86632..87492 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| GQF94_RS23450 (87635) | 87635..88540 | + | 906 | Protein_92 | IS4 family transposase IS10R | Transposase |
| GQF94_RS23455 (88589) | 88589..89293 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GQF94_RS23460 (89357) | 89357..89590 | - | 234 | Protein_94 | DUF932 domain-containing protein | - |
| GQF94_RS23465 (89708) | 89708..89995 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| GQF94_RS25445 (90020) | 90020..90226 | - | 207 | WP_000547968.1 | hypothetical protein | - |
| GQF94_RS25450 (90296) | 90296..90468 | + | 173 | Protein_97 | hypothetical protein | - |
| GQF94_RS25455 (90466) | 90466..90696 | - | 231 | WP_071586998.1 | hypothetical protein | - |
| GQF94_RS23470 (90916) | 90916..91041 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| GQF94_RS25460 (90983) | 90983..91132 | - | 150 | Protein_100 | plasmid maintenance protein Mok | - |
| - (91118) | 91118..91342 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (91118) | 91118..91342 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (91118) | 91118..91342 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (91118) | 91118..91342 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| GQF94_RS23475 (91154) | 91154..91342 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| GQF94_RS23480 (91311) | 91311..92073 | - | 763 | Protein_102 | plasmid SOS inhibition protein A | - |
| GQF94_RS23485 (92070) | 92070..92504 | - | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| GQF94_RS23490 (92559) | 92559..92756 | - | 198 | Protein_104 | hypothetical protein | - |
| GQF94_RS23495 (92784) | 92784..93017 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
| GQF94_RS23500 (93085) | 93085..93624 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| GQF94_RS23505 (93650) | 93650..93856 | - | 207 | WP_000275856.1 | hypothetical protein | - |
| GQF94_RS25465 (93926) | 93926..94006 | + | 81 | Protein_108 | hypothetical protein | - |
| GQF94_RS25470 (94189) | 94189..94358 | - | 170 | Protein_109 | hypothetical protein | - |
| GQF94_RS23510 (94952) | 94952..95923 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| GQF94_RS23515 (95923) | 95923..97089 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| GQF94_RS23525 (98571) | 98571..100772 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| GQF94_RS23530 (100798) | 100798..102131 | - | 1334 | Protein_114 | L-lysine N6-monooxygenase | VF |
| GQF94_RS23535 (102128) | 102128..103870 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| GQF94_RS23540 (103870) | 103870..104817 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| GQF94_RS23545 (104818) | 104818..106542 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| GQF94_RS23550 (106678) | 106678..107871 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| GQF94_RS23555 (108251) | 108251..108631 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| GQF94_RS23560 (108972) | 108972..109385 | - | 414 | Protein_120 | phosphopyruvate hydratase | - |
| GQF94_RS23565 (109383) | 109383..109640 | + | 258 | Protein_121 | Tn3 family transposase | - |
| GQF94_RS23570 (109874) | 109874..110731 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| GQF94_RS23575 (110728) | 110728..111585 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| GQF94_RS23580 (111582) | 111582..112409 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| GQF94_RS23585 (112409) | 112409..113323 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| GQF94_RS23590 (113679) | 113679..114376 | + | 698 | WP_223155668.1 | IS1-like element IS1A family transposase | - |
| GQF94_RS23595 (114556) | 114556..115069 | - | 514 | Protein_127 | DUF4113 domain-containing protein | - |
| GQF94_RS23600 (115130) | 115130..115234 | - | 105 | Protein_128 | AAA family ATPase | - |
| GQF94_RS23605 (115236) | 115236..115559 | - | 324 | Protein_129 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|