MGE detailed information
MGE type: Integron MGE length: 69970 bp
Accession: NZ_CP046804 Location: 1214463..1284432 Organism: Vibrio cidicii strain 2756-81 Replicon: chromosome
Accession: NZ_CP046804 Location: 1214463..1284432 Organism: Vibrio cidicii strain 2756-81 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPY24_RS11335 () | 1210088..1211059 | - | 972 | WP_156478394.1 | hypothetical protein | - |
| GPY24_RS11340 () | 1211216..1212425 | - | 1210 | Protein_1073 | site-specific integrase | - |
| GPY24_RS11345 () | 1212564..1212703 | - | 140 | Protein_1074 | DUF3265 domain-containing protein | - |
| GPY24_RS11355 () | 1213987..1214445 | - | 459 | Protein_1076 | ATP-binding protein | - |
| GPY24_RS11360 () | 1214586..1215059 | - | 474 | Protein_1077 | GNAT family N-acetyltransferase | - |
| GPY24_RS11365 () | 1215025..1215198 | - | 174 | WP_084834165.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11370 () | 1215195..1215650 | - | 456 | WP_158118633.1 | GNAT family N-acetyltransferase | - |
| GPY24_RS11375 () | 1215660..1215769 | - | 110 | Protein_1080 | DUF3265 domain-containing protein | - |
| GPY24_RS11380 () | 1215766..1216339 | - | 574 | Protein_1081 | class I SAM-dependent methyltransferase | - |
| GPY24_RS11385 () | 1216371..1216496 | - | 126 | Protein_1082 | DUF3265 domain-containing protein | - |
| GPY24_RS11395 () | 1217641..1218342 | - | 702 | WP_197467433.1 | IS21 family transposase ISVch3 | Transposase |
| GPY24_RS11400 () | 1218353..1219885 | - | 1533 | WP_065818751.1 | IS21 family transposase ISVch3 | Transposase |
| GPY24_RS11405 () | 1220417..1220539 | - | 123 | WP_084834166.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11415 () | 1221013..1221399 | - | 387 | WP_065818752.1 | hypothetical protein | - |
| GPY24_RS22810 () | 1222064..1222234 | - | 171 | Protein_1087 | DUF645 family protein | - |
| GPY24_RS11425 () | 1222430..1222555 | - | 126 | WP_084834031.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11430 () | 1222895..1223020 | - | 126 | Protein_1089 | DUF3265 domain-containing protein | - |
| GPY24_RS11435 () | 1223364..1223453 | - | 90 | WP_197467481.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11440 () | 1223471..1223758 | - | 288 | WP_158118634.1 | hypothetical protein | - |
| GPY24_RS11445 () | 1223739..1224131 | - | 393 | WP_208767195.1 | hypothetical protein | - |
| GPY24_RS11450 () | 1224439..1224732 | - | 294 | WP_061897932.1 | hypothetical protein | - |
| GPY24_RS11455 () | 1224922..1225302 | - | 381 | WP_208767196.1 | hypothetical protein | - |
| GPY24_RS11460 () | 1225629..1226663 | + | 1035 | WP_065818755.1 | IS630 family transposase ISAeme16 | Transposase |
| GPY24_RS11465 () | 1226664..1227209 | - | 546 | WP_065818756.1 | DUF4145 domain-containing protein | - |
| GPY24_RS22815 () | 1227254..1227424 | - | 171 | Protein_1097 | DUF3265 domain-containing protein | - |
| GPY24_RS11475 () | 1227486..1227794 | + | 309 | WP_197467482.1 | thiamine-binding protein | - |
| GPY24_RS22820 () | 1227830..1227901 | - | 72 | WP_165386926.1 | hypothetical protein | - |
| GPY24_RS11485 () | 1227949..1228446 | - | 498 | WP_158118636.1 | DUF2867 domain-containing protein | - |
| GPY24_RS11490 () | 1228476..1228601 | - | 126 | WP_084834033.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11495 () | 1228934..1229056 | - | 123 | WP_095429987.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11505 () | 1229416..1229539 | - | 124 | Protein_1103 | DUF3265 domain-containing protein | - |
| GPY24_RS11510 () | 1229884..1230009 | - | 126 | Protein_1104 | DUF3265 domain-containing protein | - |
| GPY24_RS11515 () | 1230475..1230763 | - | 289 | Protein_1105 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GPY24_RS11520 () | 1230760..1231041 | - | 282 | WP_000086649.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| GPY24_RS11525 () | 1231132..1231209 | - | 78 | WP_080339219.1 | hypothetical protein | - |
| GPY24_RS11530 () | 1231238..1231705 | - | 468 | WP_065818757.1 | GNAT family N-acetyltransferase | - |
| GPY24_RS22825 () | 1231732..1231803 | - | 72 | WP_165386926.1 | hypothetical protein | - |
| GPY24_RS11540 () | 1231851..1232349 | - | 499 | Protein_1110 | DUF2867 domain-containing protein | - |
| GPY24_RS11545 () | 1232379..1232504 | - | 126 | Protein_1111 | DUF3265 domain-containing protein | - |
| GPY24_RS22830 () | 1233016..1233186 | - | 171 | Protein_1112 | DUF645 family protein | - |
| GPY24_RS11555 () | 1233370..1233492 | - | 123 | Protein_1113 | DUF3265 domain-containing protein | - |
| GPY24_RS11560 () | 1233536..1234330 | - | 795 | WP_065818725.1 | IS21 family transposase ISAri1 | Transposase |
| GPY24_RS11565 () | 1234327..1235346 | - | 1020 | WP_065818724.1 | IS21 family transposase ISAba8 | Transposase |
| GPY24_RS11575 () | 1235941..1236354 | - | 414 | WP_065818754.1 | hypothetical protein | - |
| GPY24_RS11580 () | 1236383..1236509 | - | 127 | Protein_1117 | DUF3265 domain-containing protein | - |
| GPY24_RS11585 () | 1237019..1237057 | - | 39 | WP_082798268.1 | hypothetical protein | - |
| GPY24_RS11590 () | 1237073..1237201 | - | 129 | WP_084834034.1 | DUF645 family protein | - |
| GPY24_RS11595 () | 1237511..1237873 | - | 363 | WP_084834036.1 | DUF4144 domain-containing protein | - |
| GPY24_RS11600 () | 1237963..1238415 | - | 453 | WP_065818758.1 | GNAT family N-acetyltransferase | - |
| GPY24_RS11605 () | 1238402..1238574 | - | 173 | Protein_1122 | DUF3265 domain-containing protein | - |
| GPY24_RS11610 () | 1238558..1238966 | - | 409 | Protein_1123 | hypothetical protein | - |
| GPY24_RS11615 () | 1239019..1239145 | - | 127 | Protein_1124 | DUF3265 domain-containing protein | - |
| GPY24_RS11620 () | 1239488..1239613 | - | 126 | WP_084834037.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11625 () | 1239955..1240047 | - | 93 | WP_079757351.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11630 () | 1240062..1240496 | - | 435 | WP_025543071.1 | GNAT family N-acetyltransferase | - |
| GPY24_RS11635 () | 1240658..1240996 | - | 339 | WP_039465016.1 | aldehyde-activating protein | - |
| GPY24_RS11640 () | 1241028..1241150 | - | 123 | WP_084834168.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11645 () | 1241497..1241621 | - | 125 | Protein_1130 | DUF3265 domain-containing protein | - |
| GPY24_RS11650 () | 1241603..1242064 | - | 462 | WP_065818762.1 | hypothetical protein | - |
| GPY24_RS11660 () | 1242231..1243088 | - | 858 | WP_158118637.1 | hypothetical protein | - |
| GPY24_RS11665 () | 1243255..1243671 | - | 417 | WP_039428628.1 | GFA family protein | - |
| GPY24_RS11670 () | 1243711..1243833 | - | 123 | Protein_1134 | DUF3265 domain-containing protein | - |
| GPY24_RS11675 () | 1244190..1244315 | - | 126 | WP_084834037.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11680 () | 1244646..1244747 | - | 102 | WP_156478485.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11685 () | 1245414..1245707 | - | 294 | WP_061897932.1 | hypothetical protein | - |
| GPY24_RS11690 () | 1245746..1245905 | - | 160 | Protein_1138 | DUF3265 domain-containing protein | - |
| GPY24_RS11695 () | 1246228..1246359 | - | 132 | Protein_1139 | DUF3265 domain-containing protein | - |
| GPY24_RS11700 () | 1246836..1246961 | - | 126 | Protein_1140 | DUF3265 domain-containing protein | - |
| GPY24_RS11705 () | 1247303..1247428 | - | 126 | Protein_1141 | DUF3265 domain-containing protein | - |
| GPY24_RS11710 () | 1247879..1248193 | - | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| GPY24_RS11715 () | 1248180..1248512 | - | 333 | WP_061892970.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY24_RS11720 () | 1248580..1248702 | - | 123 | WP_156478486.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11725 () | 1249514..1249639 | - | 126 | WP_081947101.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11730 () | 1250103..1250564 | - | 462 | WP_065818763.1 | hypothetical protein | - |
| GPY24_RS11735 () | 1250573..1250719 | - | 147 | WP_084834170.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11740 () | 1250729..1250950 | - | 222 | WP_017420735.1 | VF530 family protein | - |
| GPY24_RS11745 () | 1251110..1251169 | - | 60 | WP_156478487.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11755 () | 1252900..1253043 | - | 144 | WP_156478488.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11760 () | 1253025..1253504 | - | 480 | WP_065818765.1 | GNAT family N-acetyltransferase | - |
| GPY24_RS11765 () | 1253648..1254103 | - | 456 | WP_197467483.1 | GNAT family N-acetyltransferase | - |
| GPY24_RS11770 () | 1254298..1254576 | + | 279 | WP_032480862.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| GPY24_RS11775 () | 1254569..1254838 | + | 270 | WP_039428600.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| GPY24_RS11780 () | 1255332..1255457 | - | 126 | WP_156478397.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11785 () | 1255466..1255837 | - | 372 | WP_033935939.1 | DUF4440 domain-containing protein | - |
| GPY24_RS11790 () | 1256453..1256887 | - | 435 | WP_065818767.1 | GNAT family N-acetyltransferase | - |
| GPY24_RS11795 () | 1256878..1257042 | - | 165 | WP_084834042.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11800 () | 1257026..1257340 | - | 315 | WP_065818768.1 | hypothetical protein | - |
| GPY24_RS11805 () | 1258601..1259068 | - | 468 | WP_167520846.1 | hypothetical protein | - |
| GPY24_RS11810 () | 1259184..1259922 | - | 739 | Protein_1161 | DUF2971 domain-containing protein | - |
| GPY24_RS11815 () | 1259970..1260029 | - | 60 | WP_082798319.1 | hypothetical protein | - |
| GPY24_RS11820 () | 1260667..1260879 | - | 213 | WP_065818770.1 | hypothetical protein | - |
| GPY24_RS11825 () | 1261638..1262240 | - | 603 | WP_084834171.1 | DUF2807 domain-containing protein | - |
| GPY24_RS11830 () | 1262416..1262931 | - | 516 | WP_094147903.1 | GNAT family N-acetyltransferase | - |
| GPY24_RS11835 () | 1263074..1263322 | - | 249 | WP_039444405.1 | hypothetical protein | - |
| GPY24_RS11840 () | 1263369..1263494 | - | 126 | WP_081947101.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11845 () | 1263838..1263963 | - | 126 | WP_082796580.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11850 () | 1264613..1264702 | - | 90 | WP_084834044.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11855 () | 1264737..1265186 | - | 450 | WP_158118638.1 | hypothetical protein | - |
| GPY24_RS11860 () | 1265164..1265349 | - | 186 | WP_158118639.1 | hypothetical protein | - |
| GPY24_RS11865 () | 1265359..1265484 | - | 126 | WP_081946578.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11875 () | 1266463..1266706 | + | 244 | Protein_1173 | type II toxin-antitoxin system ParD family antitoxin | - |
| GPY24_RS11880 () | 1266703..1267002 | + | 300 | WP_017420621.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GPY24_RS11890 () | 1267648..1267830 | - | 183 | WP_000923337.1 | DUF645 family protein | - |
| GPY24_RS11895 () | 1267949..1268968 | + | 1020 | WP_065818775.1 | IS21 family transposase ISAba8 | Transposase |
| GPY24_RS11900 () | 1268965..1269759 | + | 795 | WP_065818776.1 | IS21 family transposase ISAri1 | Transposase |
| GPY24_RS23065 () | 1269900..1270070 | - | 171 | Protein_1178 | DUF645 family protein | - |
| GPY24_RS11915 () | 1270265..1270390 | - | 126 | WP_080388995.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11920 () | 1270841..1271059 | - | 219 | WP_065819776.1 | hypothetical protein | - |
| GPY24_RS11925 () | 1271755..1272549 | - | 795 | WP_158118640.1 | Putative oxidoreductase SadH | VF |
| GPY24_RS11930 () | 1272596..1272688 | - | 93 | WP_197467435.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11935 () | 1272703..1273128 | - | 426 | WP_065818777.1 | hypothetical protein | - |
| GPY24_RS11945 () | 1273681..1273740 | - | 60 | WP_139045857.1 | hypothetical protein | - |
| GPY24_RS11955 () | 1274197..1276050 | - | 1854 | WP_065818778.1 | retron Ec67 family RNA-directed DNA polymerase/endonuclease | - |
| GPY24_RS11960 () | 1276277..1276402 | - | 126 | WP_084834048.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11965 () | 1276849..1277259 | - | 411 | WP_065818779.1 | hypothetical protein | - |
| GPY24_RS11970 () | 1277399..1278433 | - | 1035 | WP_065818755.1 | IS630 family transposase ISAeme16 | Transposase |
| GPY24_RS11975 () | 1278545..1278682 | - | 138 | WP_156478401.1 | hypothetical protein | - |
| GPY24_RS11980 () | 1278711..1278800 | - | 90 | WP_084834172.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11985 () | 1278818..1279387 | - | 570 | WP_065818780.1 | hypothetical protein | - |
| GPY24_RS11990 () | 1279890..1280015 | - | 126 | WP_084834049.1 | DUF3265 domain-containing protein | - |
| GPY24_RS11995 () | 1281854..1281976 | - | 123 | WP_081946579.1 | DUF3265 domain-containing protein | - |
| GPY24_RS12000 () | 1282321..1282446 | - | 126 | WP_019281455.1 | DUF3265 domain-containing protein | - |
| GPY24_RS12005 () | 1282778..1282900 | - | 123 | WP_072599483.1 | DUF3265 domain-containing protein | - |
| GPY24_RS12010 () | 1283262..1283381 | - | 120 | WP_084834051.1 | DUF3265 domain-containing protein | - |
| GPY24_RS12015 () | 1283378..1283821 | - | 444 | WP_065818784.1 | hypothetical protein | - |
| GPY24_RS12025 () | 1284938..1286077 | - | 1140 | WP_065818731.1 | ISAs1 family transposase | - |
| GPY24_RS12030 () | 1286345..1287877 | + | 1533 | WP_158118641.1 | IS21 family transposase | - |
| GPY24_RS12035 () | 1287888..1288628 | + | 741 | WP_065818785.1 | IS21-like element ISVch3 family helper ATPase IstB | - |
| GPY24_RS12040 () | 1289186..1289311 | - | 126 | WP_082796158.1 | DUF3265 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|