MGE detailed information
MGE type: Prophage MGE length: 34387 bp
Accession: NZ_CP046728 Location: 3542011..3576397 Organism: Mycobacterium tuberculosis strain TCDC11 Replicon: chromosome
Accession: NZ_CP046728 Location: 3542011..3576397 Organism: Mycobacterium tuberculosis strain TCDC11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GP477_RS16640 () | 3537475..3538962 | + | 1488 | WP_003416624.1 | amidase | - |
| GP477_RS16645 () | 3538959..3539915 | - | 957 | WP_003416627.1 | epoxide hydrolase MesT | - |
| GP477_RS16650 () | 3540062..3540922 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| GP477_RS16655 () | 3541017..3541412 | + | 396 | WP_071854247.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| GP477_RS16660 () | 3541652..3541945 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| GP477_RS16665 () | 3542011..3543272 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| GP477_RS16670 () | 3543591..3544880 | + | 1290 | WP_003416640.1 | ATP-binding protein | - |
| GP477_RS16680 () | 3546585..3547019 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| GP477_RS16685 () | 3547022..3547474 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| GP477_RS16690 () | 3547705..3548049 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GP477_RS16695 () | 3548046..3548375 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| GP477_RS16700 () | 3548913..3549260 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| GP477_RS16705 () | 3549257..3549877 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| GP477_RS16710 () | 3550037..3550888 | - | 852 | Protein_3299 | hypothetical protein | - |
| GP477_RS16715 () | 3550945..3552206 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| GP477_RS16720 () | 3552251..3552661 | - | 411 | Protein_3301 | hypothetical protein | - |
| GP477_RS16725 () | 3552829..3553038 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| GP477_RS16730 () | 3553285..3554319 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| GP477_RS16735 () | 3554603..3554827 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| GP477_RS16745 () | 3555537..3555998 | + | 462 | WP_003416793.1 | LLM class flavin-dependent oxidoreductase | - |
| GP477_RS16750 () | 3556096..3559074 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| GP477_RS16755 () | 3559166..3560188 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| GP477_RS16760 () | 3560266..3561684 | + | 1419 | WP_003416804.1 | zinc-dependent metalloprotease | - |
| GP477_RS16765 () | 3561690..3562589 | + | 900 | WP_003416809.1 | hypothetical protein | - |
| GP477_RS16770 () | 3562598..3562798 | - | 201 | WP_003416812.1 | hypothetical protein | - |
| GP477_RS16775 () | 3562926..3564269 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| GP477_RS16780 () | 3564303..3564581 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| GP477_RS16785 () | 3565011..3567113 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| GP477_RS16790 () | 3567237..3567491 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| GP477_RS16795 () | 3567504..3568445 | - | 942 | WP_003906027.1 | NAD(+) diphosphatase | - |
| GP477_RS16800 () | 3568504..3569571 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
| GP477_RS16805 () | 3569633..3572938 | - | 3306 | WP_003910809.1 | ATP-dependent DNA helicase AdnB | - |
| GP477_RS16810 () | 3572935..3576102 | - | 3168 | WP_003901568.1 | ATP-dependent DNA helicase AdnA | - |
| GP477_RS16815 () | 3576188..3576397 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| GP477_RS16820 () | 3576428..3577213 | + | 786 | WP_003899968.1 | lipase LipV | - |
| GP477_RS16825 () | 3577216..3577521 | + | 306 | WP_003416847.1 | MGMT family protein | - |
| GP477_RS16830 () | 3577528..3578406 | - | 879 | WP_003899969.1 | TIGR02569 family protein | - |
| GP477_RS16835 () | 3578433..3579611 | - | 1179 | WP_003416855.1 | adenylyltransferase/sulfurtransferase MoeZ | - |
| GP477_RS16840 () | 3579702..3580559 | - | 858 | WP_003901570.1 | DUF3152 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0.001 |