MGE detailed information
MGE type: Mobilizable plasmid MGE length: 207454 bp
Accession: NZ_CP046724 Location: 1..207454 Organism: Pantoea agglomerans strain ASB05 Replicon: plasmid pASB05p2
Accession: NZ_CP046724 Location: 1..207454 Organism: Pantoea agglomerans strain ASB05 Replicon: plasmid pASB05p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PAASB05_RS21285 () | 7786..8505 | - | 720 | WP_124890764.1 | hypothetical protein | - |
| PAASB05_RS21290 () | 8646..9281 | - | 636 | WP_158132432.1 | LuxR family transcriptional regulator | - |
| PAASB05_RS21295 () | 9327..9917 | - | 591 | WP_033759834.1 | helix-turn-helix domain-containing protein | - |
| PAASB05_RS21300 () | 10942..11259 | + | 318 | WP_010256762.1 | hypothetical protein | - |
| PAASB05_RS21305 () | 11269..11490 | + | 222 | WP_010256766.1 | hypothetical protein | - |
| PAASB05_RS21310 () | 11585..12115 | + | 531 | WP_010256772.1 | Major fimbrial subunit SMF-1 | VF |
| PAASB05_RS21315 () | 12178..12915 | + | 738 | WP_033759838.1 | putative fimbrial chaperone YadV | VF |
| PAASB05_RS21320 () | 12941..15532 | + | 2592 | WP_061902419.1 | Outer membrane usher protein HtrE | VF |
| PAASB05_RS21325 () | 15548..16600 | + | 1053 | WP_108912518.1 | type 1 fimbrial protein | - |
| PAASB05_RS21330 () | 16660..17322 | + | 663 | WP_158132433.1 | Transcriptional regulatory protein RcsB | VF |
| PAASB05_RS21335 () | 17357..18679 | + | 1323 | WP_010256785.1 | TolC family outer membrane protein | - |
| PAASB05_RS21340 () | 18705..19964 | + | 1260 | WP_022624194.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| PAASB05_RS21345 () | 19981..22164 | + | 2184 | WP_072123950.1 | peptidase domain-containing ABC transporter | - |
| PAASB05_RS21350 () | 22157..22591 | + | 435 | WP_010256796.1 | DcrB-related protein | - |
| PAASB05_RS21355 () | 22704..23201 | - | 498 | WP_033774010.1 | hypothetical protein | - |
| PAASB05_RS21360 () | 23198..24031 | - | 834 | WP_033774011.1 | winged helix-turn-helix domain-containing protein | - |
| PAASB05_RS21365 () | 24232..25152 | - | 921 | WP_158132434.1 | substrate-binding domain-containing protein | - |
| PAASB05_RS21370 () | 25221..26000 | - | 780 | WP_010256807.1 | TIM barrel protein | - |
| PAASB05_RS21375 () | 26000..27013 | - | 1014 | WP_158132435.1 | Gfo/Idh/MocA family oxidoreductase | - |
| PAASB05_RS21380 () | 27010..28473 | - | 1464 | WP_010256816.1 | sugar porter family MFS transporter | - |
| PAASB05_RS21385 () | 28663..30621 | + | 1959 | WP_158132436.1 | Acetoin dehydrogenase operon transcriptional activator AcoR | VF |
| PAASB05_RS21390 () | 30766..31380 | + | 615 | WP_010671991.1 | HTH-type transcriptional regulator BetI | VF |
| PAASB05_RS21395 () | 31618..32901 | + | 1284 | WP_033786418.1 | beta-ketoacyl-ACP synthase II | - |
| PAASB05_RS21400 () | 33143..34021 | + | 879 | WP_010256830.1 | ROK family protein | - |
| PAASB05_RS21405 () | 34136..35086 | - | 951 | WP_045139823.1 | Recombination-promoting nuclease RpnD | VF |
| PAASB05_RS21410 () | 35548..36336 | - | 789 | WP_158132437.1 | MipA/OmpV family protein | - |
| PAASB05_RS21415 () | 36466..37164 | + | 699 | WP_010256840.1 | Response regulator ArlR | VF |
| PAASB05_RS21420 () | 37161..38330 | + | 1170 | WP_158132438.1 | two-component sensor histidine kinase | - |
| PAASB05_RS21425 () | 38424..39557 | + | 1134 | WP_010256842.1 | efflux RND transporter periplasmic adaptor subunit | - |
| PAASB05_RS21430 () | 39554..42598 | + | 3045 | WP_158132439.1 | efflux RND transporter permease subunit | - |
| PAASB05_RS21435 () | 42649..42894 | - | 246 | WP_010256845.1 | hypothetical protein | - |
| PAASB05_RS21440 () | 42966..43871 | - | 906 | WP_022624205.1 | LysR family transcriptional regulator | - |
| PAASB05_RS21445 () | 43976..44758 | + | 783 | WP_033774026.1 | acetolactate decarboxylase | - |
| PAASB05_RS21450 () | 44773..46452 | + | 1680 | WP_010256852.1 | acetolactate synthase AlsS | - |
| PAASB05_RS21455 () | 46474..47247 | + | 774 | WP_050680277.1 | Diacetyl reductase [(S)-acetoin forming] | VF |
| PAASB05_RS21460 () | 47453..48904 | + | 1452 | WP_029519496.1 | Flagellin | VF |
| PAASB05_RS21465 () | 49246..50559 | + | 1314 | WP_010256858.1 | CitMHS family transporter | - |
| PAASB05_RS21470 () | 50727..51566 | + | 840 | WP_010256859.1 | MBL fold metallo-hydrolase | - |
| PAASB05_RS21475 () | 51618..51931 | - | 314 | Protein_39 | HigA family addiction module antidote protein | - |
| PAASB05_RS21480 () | 52031..54568 | - | 2538 | WP_158132440.1 | UvrABC system protein A | VF |
| PAASB05_RS21485 () | 55231..55689 | + | 459 | WP_031292265.1 | hypothetical protein | - |
| PAASB05_RS21490 () | 55683..55976 | + | 294 | WP_022624214.1 | DUF1493 family protein | - |
| PAASB05_RS21495 () | 56076..57169 | + | 1094 | WP_158132486.1 | IS3 family transposase ISEhe4 | Transposase |
| PAASB05_RS21500 () | 57383..58861 | - | 1479 | WP_158132441.1 | DUF2382 domain-containing protein | - |
| PAASB05_RS21505 () | 59148..59717 | - | 570 | WP_033786394.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| PAASB05_RS21510 () | 59976..60560 | + | 585 | WP_158132442.1 | GNAT family N-acetyltransferase | - |
| PAASB05_RS21515 () | 60616..62751 | - | 2136 | WP_158132443.1 | EAL domain-containing protein | - |
| PAASB05_RS21520 () | 63157..63396 | - | 240 | WP_010256895.1 | hypothetical protein | - |
| PAASB05_RS21525 () | 63758..65191 | - | 1434 | WP_158132444.1 | Methyl-accepting chemotaxis protein II | VF |
| PAASB05_RS21530 () | 65538..67319 | + | 1782 | WP_158132445.1 | GGDEF and EAL domain-containing protein | - |
| PAASB05_RS21535 () | 67344..68927 | - | 1584 | WP_158132446.1 | sensor domain-containing diguanylate cyclase | - |
| PAASB05_RS22540 () | 69325..69498 | - | 174 | WP_010256913.1 | hypothetical protein | - |
| PAASB05_RS21540 () | 70017..70928 | + | 912 | WP_158132447.1 | GNAT family N-acetyltransferase | - |
| PAASB05_RS21545 () | 70930..71175 | - | 246 | WP_010256916.1 | hypothetical protein | - |
| PAASB05_RS21550 () | 71558..72103 | + | 546 | WP_158132448.1 | chorismate mutase | - |
| PAASB05_RS21555 () | 72126..73316 | + | 1191 | WP_158132449.1 | cytochrome P450 | - |
| PAASB05_RS21560 () | 73351..74355 | - | 1005 | WP_158132450.1 | substrate-binding domain-containing protein | - |
| PAASB05_RS21565 () | 74385..75794 | - | 1410 | WP_022624228.1 | sucrose-6-phosphate hydrolase | - |
| PAASB05_RS21570 () | 75794..77164 | - | 1371 | WP_010256928.1 | sucrose-specific PTS transporter subunit IIBC | - |
| PAASB05_RS21575 () | 77232..78767 | - | 1536 | WP_064689869.1 | carbohydrate porin | - |
| PAASB05_RS21580 () | 78925..79851 | - | 927 | WP_022624231.1 | aminoimidazole riboside kinase | - |
| PAASB05_RS21585 () | 80071..81042 | - | 972 | WP_122889906.1 | ParB/RepB/Spo0J family partition protein | - |
| PAASB05_RS21590 () | 81039..82241 | - | 1203 | WP_010256940.1 | Plasmid partition protein A | VF |
| PAASB05_RS21595 () | 84277..85350 | + | 1074 | WP_010256943.1 | RepB family plasmid replication initiator protein | - |
| PAASB05_RS21600 () | 86715..87902 | - | 1188 | WP_064689871.1 | diguanylate phosphodiesterase | - |
| PAASB05_RS21605 () | 88154..88363 | - | 210 | WP_033759908.1 | DUF1471 domain-containing protein | - |
| PAASB05_RS21610 () | 88563..90347 | - | 1785 | WP_158132451.1 | GGDEF and EAL domain-containing protein | - |
| PAASB05_RS21615 () | 90867..91091 | - | 225 | WP_033770153.1 | DUF3606 domain-containing protein | - |
| PAASB05_RS21620 () | 91460..91699 | + | 240 | WP_022624236.1 | hypothetical protein | - |
| PAASB05_RS21625 () | 91874..92362 | + | 489 | WP_010671953.1 | Hsp20 family protein | - |
| PAASB05_RS21630 () | 92436..93200 | - | 765 | WP_010256962.1 | MerR family transcriptional regulator | - |
| PAASB05_RS21635 () | 93396..93605 | - | 210 | WP_010256969.1 | CsbD family protein | - |
| PAASB05_RS21640 () | 93777..94994 | - | 1218 | WP_158132452.1 | diguanylate phosphodiesterase | - |
| PAASB05_RS21645 () | 96263..96592 | - | 330 | WP_010256979.1 | hypothetical protein | - |
| PAASB05_RS21650 () | 97235..98893 | + | 1659 | WP_132499686.1 | Methyl-accepting chemotaxis protein I | VF |
| PAASB05_RS21655 () | 99496..101421 | + | 1926 | WP_010256986.1 | Methyl-accepting chemotaxis protein I | VF |
| PAASB05_RS21660 () | 101477..102277 | - | 801 | WP_158132453.1 | MBL fold metallo-hydrolase | - |
| PAASB05_RS21665 () | 102355..103470 | - | 1116 | WP_033770144.1 | metallophosphoesterase | - |
| PAASB05_RS21670 () | 103706..106033 | - | 2328 | WP_158132454.1 | FdhF/YdeP family oxidoreductase | - |
| PAASB05_RS21675 () | 106388..106831 | + | 444 | WP_010256997.1 | hypothetical protein | - |
| PAASB05_RS21680 () | 107005..107352 | - | 348 | WP_003850685.1 | HNH nuclease YajD | - |
| PAASB05_RS22545 () | 107687..107854 | - | 168 | WP_009093121.1 | hypothetical protein | - |
| PAASB05_RS21685 () | 108145..111249 | + | 3105 | WP_158132455.1 | Multidrug resistance protein MexB | VF |
| PAASB05_RS21690 () | 111309..112334 | - | 1026 | WP_010671942.1 | alpha/beta hydrolase | - |
| PAASB05_RS21695 () | 112403..113596 | - | 1194 | WP_197746041.1 | MFS transporter | - |
| PAASB05_RS21700 () | 113730..114626 | + | 897 | WP_010257019.1 | HTH-type transcriptional regulator PgrR | VF |
| PAASB05_RS21705 () | 114690..114866 | - | 177 | WP_010257023.1 | stress-induced protein | - |
| PAASB05_RS21710 () | 115221..115508 | - | 288 | WP_033759930.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PAASB05_RS21715 () | 115508..115747 | - | 240 | WP_010257033.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PAASB05_RS21720 () | 116107..118080 | + | 1974 | WP_158132456.1 | Aerotaxis receptor | VF |
| PAASB05_RS21725 () | 118185..119201 | + | 1017 | WP_010257039.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| PAASB05_RS21730 () | 119251..119919 | - | 669 | WP_031292291.1 | hypothetical protein | - |
| PAASB05_RS21735 () | 120270..121049 | + | 780 | WP_010257042.1 | MBL fold metallo-hydrolase | - |
| PAASB05_RS21740 () | 121125..122117 | + | 993 | WP_158132457.1 | HTH-type transcriptional regulator CdhR | VF |
| PAASB05_RS21745 () | 122209..122610 | - | 402 | WP_010257048.1 | H-NS histone family protein | - |
| PAASB05_RS21750 () | 122886..124448 | + | 1563 | WP_158132458.1 | Phytochrome-like protein cph2 | VF |
| PAASB05_RS21755 () | 124517..124963 | + | 447 | WP_010671933.1 | VOC family protein | - |
| PAASB05_RS21760 () | 125193..125594 | - | 402 | WP_010257055.1 | H-NS histone family protein | - |
| PAASB05_RS21765 () | 126467..126652 | + | 186 | WP_158132459.1 | DUF2256 domain-containing protein | - |
| PAASB05_RS21770 () | 126705..127007 | - | 303 | WP_029519489.1 | hypothetical protein | - |
| PAASB05_RS21775 () | 127113..127655 | - | 543 | WP_033770122.1 | porin | - |
| PAASB05_RS21780 () | 127719..127955 | - | 237 | WP_010257065.1 | YgdI/YgdR family lipoprotein | - |
| PAASB05_RS21785 () | 128966..129346 | + | 381 | WP_010671929.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| PAASB05_RS21790 () | 129841..130065 | + | 225 | WP_022624265.1 | FeoA domain-containing protein | - |
| PAASB05_RS21795 () | 130065..132392 | + | 2328 | WP_158132460.1 | Fe(2+) transporter FeoB | VF |
| PAASB05_RS21800 () | 132828..133865 | - | 1038 | WP_052271874.1 | tyrosine-type recombinase/integrase | - |
| PAASB05_RS21805 () | 134801..135271 | + | 471 | WP_033770116.1 | SgcJ/EcaC family oxidoreductase | - |
| PAASB05_RS21810 () | 135566..136783 | - | 1218 | WP_111534864.1 | monooxygenase | - |
| PAASB05_RS21815 () | 136776..138236 | - | 1461 | WP_033781082.1 | MFS transporter | - |
| PAASB05_RS21820 () | 138595..140004 | - | 1410 | WP_158132461.1 | LLM class flavin-dependent oxidoreductase | - |
| PAASB05_RS21825 () | 140073..141485 | - | 1413 | WP_158132462.1 | FAD-dependent oxidoreductase | - |
| PAASB05_RS21830 () | 141505..142677 | - | 1173 | WP_158132463.1 | FMNH2-dependent alkanesulfonate monooxygenase | - |
| PAASB05_RS21835 () | 142952..144841 | + | 1890 | WP_022624277.1 | Transcriptional regulatory protein ZraR | VF |
| PAASB05_RS21840 () | 144961..145887 | + | 927 | WP_022624278.1 | sulfonate ABC transporter substrate-binding protein | - |
| PAASB05_RS21845 () | 146202..146471 | - | 270 | WP_010257103.1 | DUF1471 domain-containing protein | - |
| PAASB05_RS21850 () | 146747..147883 | - | 1137 | WP_022624279.1 | HlyD family secretion protein | - |
| PAASB05_RS21855 () | 147885..148211 | - | 327 | WP_033759973.1 | DUF3302 domain-containing protein | - |
| PAASB05_RS21860 () | 148806..150458 | + | 1653 | WP_158132464.1 | intermembrane transport protein PqiB | - |
| PAASB05_RS21865 () | 150599..150850 | + | 252 | WP_033759975.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PAASB05_RS21870 () | 150847..151134 | + | 288 | WP_010257115.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PAASB05_RS21875 () | 151497..151811 | + | 315 | WP_033759977.1 | hypothetical protein | - |
| PAASB05_RS21880 () | 151808..152614 | - | 807 | WP_158132488.1 | DUF4225 domain-containing protein | - |
| PAASB05_RS21885 () | 152718..152894 | - | 177 | WP_158132465.1 | hypothetical protein | - |
| PAASB05_RS21890 () | 153233..153517 | - | 285 | Protein_124 | general secretion pathway protein GspD | - |
| PAASB05_RS21895 () | 153546..153758 | + | 213 | WP_158132466.1 | hypothetical protein | - |
| PAASB05_RS21900 () | 153862..154119 | + | 258 | WP_033774102.1 | hypothetical protein | - |
| PAASB05_RS21905 () | 154191..154667 | + | 477 | WP_033774104.1 | hypothetical protein | - |
| PAASB05_RS21910 () | 154688..154987 | + | 300 | Protein_128 | hypothetical protein | - |
| PAASB05_RS21915 () | 155262..156293 | - | 1032 | WP_158132467.1 | tyrosine-type recombinase/integrase | - |
| PAASB05_RS21920 () | 156897..157952 | - | 1056 | WP_158132468.1 | hypothetical protein | - |
| PAASB05_RS21925 () | 159209..159700 | - | 492 | WP_158132469.1 | DUF2165 family protein | - |
| PAASB05_RS21930 () | 159700..160770 | - | 1071 | WP_050499143.1 | hypothetical protein | - |
| PAASB05_RS21935 () | 160771..160998 | - | 228 | WP_158132470.1 | hypothetical protein | VF |
| PAASB05_RS21940 () | 160988..162469 | - | 1482 | WP_080717704.1 | AMP-binding protein | - |
| PAASB05_RS21945 () | 162540..163694 | - | 1155 | WP_050499144.1 | hypothetical protein | - |
| PAASB05_RS21950 () | 163687..164478 | - | 792 | WP_033774114.1 | SDR family oxidoreductase | - |
| PAASB05_RS21955 () | 164478..165914 | - | 1437 | WP_050499145.1 | MFS transporter | - |
| PAASB05_RS21960 () | 165938..166621 | - | 684 | WP_158132471.1 | methyltransferase domain-containing protein | - |
| PAASB05_RS21965 () | 166666..168087 | - | 1422 | WP_158132472.1 | aldehyde dehydrogenase family protein | - |
| PAASB05_RS21970 () | 168087..169187 | - | 1101 | WP_050499146.1 | AMP-binding protein | - |
| PAASB05_RS21975 () | 169168..169794 | - | 627 | WP_072008789.1 | Phenazine biosynthesis protein PhzG | VF |
| PAASB05_RS21980 () | 169832..170695 | - | 864 | WP_033774119.1 | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase | VF |
| PAASB05_RS21985 () | 170695..172524 | - | 1830 | WP_158132473.1 | Anthranilate synthase component 1 | VF |
| PAASB05_RS21990 () | 172592..173221 | - | 630 | WP_033774121.1 | Phenazine biosynthesis protein PhzD | VF |
| PAASB05_RS21995 () | 173355..173831 | - | 477 | WP_158132474.1 | Phenazine biosynthesis protein PhzB 2 | VF |
| PAASB05_RS22000 () | 174250..174639 | + | 390 | WP_033774124.1 | VOC family protein | - |
| PAASB05_RS22005 () | 175253..176103 | + | 851 | Protein_147 | tyrosine-type recombinase/integrase | - |
| PAASB05_RS22010 () | 176394..176684 | - | 291 | WP_052271864.1 | helix-turn-helix domain-containing protein | - |
| PAASB05_RS22015 () | 176681..177013 | - | 333 | WP_031292300.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PAASB05_RS22020 () | 177133..177408 | - | 276 | Protein_150 | SAM-dependent DNA methyltransferase | - |
| PAASB05_RS22025 () | 177565..177777 | + | 213 | Protein_151 | haloacid dehalogenase type II | - |
| PAASB05_RS22030 () | 177882..178247 | - | 366 | WP_158132475.1 | 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase | - |
| PAASB05_RS22035 () | 178244..178564 | - | 321 | WP_158132476.1 | EamA family transporter | - |
| PAASB05_RS22040 () | 178564..180231 | - | 1668 | WP_158132477.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
| PAASB05_RS22045 () | 180231..181133 | - | 903 | WP_033770064.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase | - |
| PAASB05_RS22050 () | 181133..183112 | - | 1980 | WP_158132478.1 | Bifunctional polymyxin resistance protein ArnA | VF |
| PAASB05_RS22055 () | 183109..184092 | - | 984 | WP_010257142.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| PAASB05_RS22060 () | 184094..185230 | - | 1137 | WP_158132479.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| PAASB05_RS22065 () | 185927..186505 | + | 579 | WP_033774155.1 | YceI family protein | - |
| PAASB05_RS22070 () | 186528..187313 | - | 786 | WP_158132480.1 | hypothetical protein | - |
| PAASB05_RS22075 () | 187310..187810 | - | 501 | WP_080571103.1 | sigma-70 family RNA polymerase sigma factor | - |
| PAASB05_RS22080 () | 187847..188383 | - | 537 | WP_158132481.1 | tetratricopeptide repeat protein | - |
| PAASB05_RS22085 () | 188528..189541 | - | 1014 | WP_158132482.1 | Gfo/Idh/MocA family oxidoreductase | - |
| PAASB05_RS22090 () | 189649..190659 | + | 1011 | WP_050680230.1 | LacI family DNA-binding transcriptional regulator | - |
| PAASB05_RS22095 () | 191262..191705 | + | 444 | WP_158132483.1 | PACE efflux transporter | - |
| PAASB05_RS22100 () | 191940..192143 | + | 204 | WP_010257166.1 | hemolysin | - |
| PAASB05_RS22105 () | 192681..192929 | - | 249 | WP_071778630.1 | DUF333 domain-containing protein | - |
| PAASB05_RS22110 () | 193552..196449 | + | 2898 | WP_158132484.1 | Adhesin/invasin TibA autotransporter | VF |
| PAASB05_RS22115 () | 196490..196807 | + | 318 | WP_010257173.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| PAASB05_RS22120 () | 196870..198114 | - | 1245 | WP_010257175.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| PAASB05_RS22125 () | 198111..200297 | - | 2187 | WP_050499151.1 | type I secretion system permease/ATPase | - |
| PAASB05_RS22130 () | 200476..201801 | - | 1326 | WP_132499722.1 | TolC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|