MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 77549 bp
Accession: NZ_CP046348 Location: 1885753..1963301 Organism: Citrobacter portucalensis strain FDAARGOS_738 Replicon: chromosome
Accession: NZ_CP046348 Location: 1885753..1963301 Organism: Citrobacter portucalensis strain FDAARGOS_738 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC46_RS09435 () | 1880840..1881781 | + | 942 | WP_003830113.1 | 4-hydroxyproline epimerase | - |
| FOC46_RS09440 () | 1881778..1882881 | + | 1104 | WP_003830116.1 | FAD-binding oxidoreductase | - |
| FOC46_RS09445 () | 1882878..1883132 | + | 255 | WP_003830118.1 | (2Fe-2S)-binding protein | - |
| FOC46_RS09450 () | 1883119..1884375 | + | 1257 | WP_003830119.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| FOC46_RS09455 () | 1884877..1885749 | + | 873 | WP_082190884.1 | HNH endonuclease | - |
| FOC46_RS09460 () | 1885885..1886769 | + | 885 | WP_003830123.1 | ParA family protein | - |
| FOC46_RS09465 () | 1886766..1887140 | + | 375 | WP_003830125.1 | hypothetical protein | - |
| FOC46_RS09470 () | 1887133..1888488 | + | 1356 | WP_003830127.1 | replicative DNA helicase | - |
| FOC46_RS09475 () | 1888485..1889969 | + | 1485 | WP_003830130.1 | chromosome partitioning protein ParB | - |
| FOC46_RS09480 () | 1889953..1890492 | + | 540 | WP_003830133.1 | DUF2857 domain-containing protein | - |
| FOC46_RS09485 () | 1890510..1891643 | + | 1134 | WP_003830134.1 | helix-turn-helix domain-containing protein | - |
| FOC46_RS09490 () | 1891709..1892380 | - | 672 | WP_000863683.1 | hypothetical protein | - |
| FOC46_RS09495 () | 1892507..1893835 | - | 1329 | WP_032934262.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| FOC46_RS09500 () | 1893840..1894145 | - | 306 | WP_072025544.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| FOC46_RS09505 () | 1894771..1898013 | + | 3243 | WP_003830139.1 | ATP-binding protein | - |
| FOC46_RS09510 () | 1898328..1899026 | + | 699 | WP_003830141.1 | TIGR03761 family integrating conjugative element protein | - |
| FOC46_RS09515 () | 1899016..1899510 | + | 495 | WP_003830143.1 | DUF3158 family protein | - |
| FOC46_RS09520 () | 1900076..1900492 | + | 417 | WP_001003406.1 | DUF3577 domain-containing protein | - |
| FOC46_RS09525 () | 1900613..1901077 | + | 465 | WP_032934229.1 | Electron transport complex subunit RsxA | VF |
| FOC46_RS09530 () | 1901070..1901678 | + | 609 | WP_003830147.1 | hypothetical protein | - |
| FOC46_RS09535 () | 1901685..1902335 | + | 651 | WP_003830149.1 | TIGR03759 family integrating conjugative element protein | - |
| FOC46_RS09540 () | 1902311..1902841 | + | 531 | WP_003830151.1 | Electron transport complex subunit RsxD | VF |
| FOC46_RS09545 () | 1902838..1903245 | + | 408 | WP_003830152.1 | integrating conjugative element protein | - |
| FOC46_RS09550 () | 1903242..1905275 | + | 2034 | WP_003830154.1 | type IV conjugative transfer system coupling protein TraD | - |
| FOC46_RS09555 () | 1905238..1905504 | + | 267 | WP_003830156.1 | hypothetical protein | - |
| FOC46_RS09560 () | 1905504..1906184 | + | 681 | WP_003830158.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| FOC46_RS09565 () | 1906315..1907088 | + | 774 | WP_003830160.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| FOC46_RS09570 () | 1907081..1907998 | + | 918 | WP_003830162.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| FOC46_RS09575 () | 1908037..1908339 | + | 303 | WP_082190885.1 | DUF4400 domain-containing protein | - |
| FOC46_RS09580 () | 1908419..1910149 | + | 1731 | WP_003830164.1 | hypothetical protein | - |
| FOC46_RS09585 () | 1910237..1910554 | + | 318 | WP_003830165.1 | RAQPRD family integrative conjugative element protein | - |
| FOC46_RS09590 () | 1910551..1910784 | + | 234 | WP_000187176.1 | TIGR03758 family integrating conjugative element protein | - |
| FOC46_RS09595 () | 1910803..1911129 | + | 327 | WP_003830169.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| FOC46_RS09600 () | 1911133..1911486 | + | 354 | WP_000104330.1 | TIGR03750 family conjugal transfer protein | - |
| FOC46_RS09605 () | 1911483..1912109 | + | 627 | WP_001272135.1 | TIGR03746 family integrating conjugative element protein | - |
| FOC46_RS09610 () | 1912106..1912894 | + | 789 | Protein_1758 | TIGR03749 family integrating conjugative element protein | - |
| FOC46_RS09615 () | 1912891..1914228 | + | 1338 | WP_000775702.1 | TIGR03752 family integrating conjugative element protein | - |
| FOC46_RS09620 () | 1914228..1914617 | + | 390 | WP_003830178.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| FOC46_RS09625 () | 1914617..1917265 | + | 2649 | WP_032934263.1 | conjugative transfer ATPase | - |
| FOC46_RS09630 () | 1917545..1917952 | + | 408 | WP_000256581.1 | hypothetical protein | - |
| FOC46_RS09635 () | 1918026..1919108 | + | 1083 | WP_001087768.1 | hypothetical protein | - |
| FOC46_RS09640 () | 1919372..1919557 | - | 186 | WP_000592583.1 | hypothetical protein | - |
| FOC46_RS09645 () | 1919657..1920973 | - | 1317 | WP_000616909.1 | McrC family protein | - |
| FOC46_RS09650 () | 1920973..1923600 | - | 2628 | WP_003830186.1 | AAA family ATPase | - |
| FOC46_RS09655 () | 1924022..1925317 | - | 1296 | WP_003830188.1 | hypothetical protein | - |
| FOC46_RS09660 () | 1925450..1925674 | - | 225 | WP_000205059.1 | helix-turn-helix domain-containing protein | - |
| FOC46_RS09665 () | 1925782..1926018 | - | 237 | WP_000095375.1 | helix-turn-helix domain-containing protein | - |
| FOC46_RS09670 () | 1926122..1926382 | + | 261 | WP_003830191.1 | helix-turn-helix domain-containing protein | - |
| FOC46_RS09675 () | 1926379..1927110 | + | 732 | WP_003830193.1 | Crp/Fnr family transcriptional regulator | - |
| FOC46_RS09680 () | 1927175..1927999 | - | 825 | WP_003830195.1 | nucleotide-binding protein | - |
| FOC46_RS09685 () | 1928078..1929244 | - | 1167 | WP_003830197.1 | anaerobic sulfatase maturase | - |
| FOC46_RS09690 () | 1929241..1930041 | - | 801 | WP_003830198.1 | sulfite exporter TauE/SafE family protein | - |
| FOC46_RS09695 () | 1930045..1931337 | - | 1293 | WP_003830201.1 | HTH-type transcriptional repressor PurR | VF |
| FOC46_RS09700 () | 1931351..1932595 | - | 1245 | WP_003830204.1 | oligosaccharide MFS transporter | - |
| FOC46_RS09705 () | 1932870..1936019 | + | 3150 | WP_003830205.1 | alpha-N-acetylglucosaminidase C-terminal domain-containing protein | - |
| FOC46_RS09710 () | 1936081..1937088 | + | 1008 | WP_003830207.1 | OmpG family monomeric porin | - |
| FOC46_RS09715 () | 1937104..1938477 | + | 1374 | WP_003830209.1 | glycoside hydrolase family 16 protein | - |
| FOC46_RS09720 () | 1938596..1939531 | + | 936 | WP_003830210.1 | TIGR03756 family integrating conjugative element protein | - |
| FOC46_RS09725 () | 1939534..1940901 | + | 1368 | WP_003830212.1 | integrating conjugative element protein | - |
| FOC46_RS09730 () | 1940898..1941155 | + | 258 | WP_003830215.1 | hypothetical protein | - |
| FOC46_RS09735 () | 1941152..1942630 | + | 1479 | WP_003830217.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| FOC46_RS09740 () | 1942642..1942807 | - | 166 | Protein_1784 | IS200-IS605 family transposase ISSham1 | Transposase |
| FOC46_RS09745 () | 1943066..1948522 | - | 5457 | WP_003830221.1 | ATP-binding protein | - |
| FOC46_RS09750 () | 1948519..1950201 | - | 1683 | WP_003830223.1 | hypothetical protein | - |
| FOC46_RS09755 () | 1950191..1954348 | - | 4158 | WP_003830225.1 | protein kinase | - |
| FOC46_RS09760 () | 1954348..1955778 | - | 1431 | WP_003830227.1 | hypothetical protein | - |
| FOC46_RS09765 () | 1955872..1957875 | - | 2004 | WP_003830230.1 | N-6 DNA methylase | - |
| FOC46_RS09770 () | 1957904..1958110 | - | 207 | WP_003830232.1 | helix-turn-helix domain-containing protein | - |
| FOC46_RS09775 () | 1958274..1958624 | + | 351 | WP_003830234.1 | helix-turn-helix domain-containing protein | - |
| FOC46_RS09780 () | 1959092..1959385 | + | 294 | WP_003830236.1 | hypothetical protein | - |
| FOC46_RS09785 () | 1959470..1960381 | + | 912 | WP_003830238.1 | DUF1738 domain-containing protein | - |
| FOC46_RS09790 () | 1960560..1962179 | + | 1620 | WP_003830239.1 | helicase/relaxase domain-containing protein | - |
| FOC46_RS09795 () | 1962169..1963095 | + | 927 | WP_003830242.1 | hypothetical protein ; Integrase | Integrase |
| FOC46_RS09805 () | 1963560..1964579 | + | 1020 | WP_003830244.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| FOC46_RS09810 () | 1964727..1966229 | + | 1503 | WP_003830246.1 | DUF853 domain-containing protein | - |
| FOC46_RS09815 () | 1966332..1967414 | - | 1083 | WP_003025875.1 | LPS export ABC transporter permease LptG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|