MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 38104 bp
Accession: NZ_CP046318 Location: 1..38104 Organism: Campylobacter coli strain FDAARGOS_735 Replicon: plasmid unnamed1
Accession: NZ_CP046318 Location: 1..38104 Organism: Campylobacter coli strain FDAARGOS_735 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC43_RS08585 () | 902..1189 | - | 288 | WP_002779817.1 | VirB3 family type IV secretion system protein | - |
| FOC43_RS08590 () | 1189..1485 | - | 297 | WP_002779818.1 | TrbC/VirB2 family protein | - |
| FOC43_RS08595 () | 1495..2433 | - | 939 | WP_002779819.1 | Type IV secretion system protein PtlH | VF |
| FOC43_RS08600 () | 2841..3254 | - | 414 | WP_002779821.1 | type II toxin-antitoxin system VapC family toxin | - |
| FOC43_RS08605 () | 3257..4171 | - | 915 | WP_002779822.1 | hypothetical protein | - |
| FOC43_RS08610 () | 5118..5318 | + | 201 | WP_155820420.1 | hypothetical protein | - |
| FOC43_RS08615 () | 5429..5896 | + | 468 | WP_072214055.1 | IS200-IS605 family transposase ISCco1 | Transposase |
| FOC43_RS08620 () | 5898..7148 | + | 1251 | WP_032685593.1 | IS200-IS605 family transposase ISCco1 | Transposase |
| FOC43_RS08625 () | 7199..7522 | - | 324 | WP_002790618.1 | hypothetical protein | - |
| FOC43_RS08630 () | 7712..8080 | + | 369 | WP_002779826.1 | hypothetical protein | - |
| FOC43_RS08635 () | 8058..10214 | + | 2157 | WP_002779827.1 | Protein TraI | Relaxase |
| FOC43_RS08640 () | 10253..10477 | - | 225 | WP_002779829.1 | hypothetical protein | - |
| FOC43_RS08645 () | 10480..11166 | - | 687 | WP_002779831.1 | Protein virC1 | VF |
| FOC43_RS08650 () | 11214..11609 | - | 396 | WP_002779833.1 | conjugal transfer protein TraM | - |
| FOC43_RS08655 () | 11673..12140 | - | 468 | WP_002779834.1 | signal peptidase I | - |
| FOC43_RS08660 () | 12145..12828 | - | 684 | WP_002779836.1 | Fic family protein | Toxin Detail |
| FOC43_RS08665 () | 12821..13063 | - | 243 | WP_002779838.1 | hypothetical protein | Antitoxin Detail |
| FOC43_RS08670 () | 13307..13774 | + | 468 | WP_072214055.1 | IS200-IS605 family transposase ISCco1 | Transposase |
| FOC43_RS08675 () | 13776..15026 | + | 1251 | WP_032685593.1 | IS200-IS605 family transposase ISCco1 | Transposase |
| FOC43_RS08680 () | 15077..15400 | - | 324 | WP_002790618.1 | hypothetical protein | - |
| FOC43_RS08685 () | 15590..15958 | + | 369 | WP_002779826.1 | hypothetical protein | - |
| FOC43_RS08690 () | 15936..18092 | + | 2157 | WP_002779827.1 | Protein TraI | Relaxase |
| FOC43_RS08695 () | 18131..18355 | - | 225 | WP_002779829.1 | hypothetical protein | - |
| FOC43_RS08700 () | 18358..19044 | - | 687 | WP_002779831.1 | Protein virC1 | VF |
| FOC43_RS08705 () | 19092..19487 | - | 396 | WP_002779833.1 | conjugal transfer protein TraM | - |
| FOC43_RS08710 () | 19551..20018 | - | 468 | WP_002779834.1 | signal peptidase I | - |
| FOC43_RS08715 () | 20023..20706 | - | 684 | WP_002779836.1 | Fic family protein | Toxin Detail |
| FOC43_RS08720 () | 20699..20941 | - | 243 | WP_002779838.1 | hypothetical protein | Antitoxin Detail |
| FOC43_RS08725 () | 21185..21640 | + | 456 | WP_155820423.1 | IS200-IS605 family transposase ISCco1 | Transposase |
| FOC43_RS08730 () | 21653..22903 | + | 1251 | WP_032685593.1 | IS200-IS605 family transposase ISCco1 | Transposase |
| FOC43_RS08735 () | 22954..23673 | - | 720 | WP_002784845.1 | conjugal transfer protein TraL | - |
| FOC43_RS08740 () | 23684..25507 | - | 1824 | WP_002779800.1 | Conjugal transfer protein TraG | VF |
| FOC43_RS08745 () | 25504..27717 | - | 2214 | WP_002779801.1 | DUF1738 domain-containing protein | - |
| FOC43_RS08915 () | 27722..27862 | - | 141 | WP_002779802.1 | hypothetical protein | - |
| FOC43_RS08750 () | 27849..28211 | - | 363 | WP_002779803.1 | single-stranded DNA-binding protein | - |
| FOC43_RS08755 () | 28308..28853 | - | 546 | WP_002779804.1 | lytic transglycosylase domain-containing protein | - |
| FOC43_RS08760 () | 28846..30087 | - | 1242 | WP_002779805.1 | Type IV secretion system protein virB10 | VF |
| FOC43_RS08765 () | 30091..30534 | - | 444 | WP_002779806.1 | hypothetical protein | - |
| FOC43_RS08770 () | 30531..31691 | - | 1161 | WP_173937789.1 | P-type conjugative transfer protein TrbG | - |
| FOC43_RS08775 () | 31702..32397 | - | 696 | WP_002779808.1 | conjugal transfer protein TrbF | - |
| FOC43_RS08780 () | 32418..33605 | - | 1188 | WP_002779809.1 | P-type conjugative transfer protein TrbL | - |
| FOC43_RS08785 () | 33592..33855 | - | 264 | WP_002779810.1 | EexN family lipoprotein | - |
| FOC43_RS08790 () | 33904..34692 | - | 789 | WP_002779811.1 | P-type conjugative transfer protein TrbJ | - |
| FOC43_RS08795 () | 35279..35857 | - | 579 | WP_032685585.1 | Rha family transcriptional regulator | - |
| FOC43_RS08800 () | 35869..36540 | - | 672 | WP_002779815.1 | TrbM protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|