MGE detailed information
MGE type: Prophage MGE length: 68782 bp
Accession: NZ_CP046294 Location: 965103..1033884 Organism: Yersinia intermedia strain FDAARGOS_729 Replicon: chromosome
Accession: NZ_CP046294 Location: 965103..1033884 Organism: Yersinia intermedia strain FDAARGOS_729 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC37_RS04255 () | 960532..961038 | + | 507 | WP_005191489.1 | chorismate lyase | - |
| FOC37_RS04260 () | 961068..961937 | + | 870 | WP_042570072.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| FOC37_RS04265 () | 962012..964480 | - | 2469 | WP_005191487.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| FOC37_RS04270 () | 964607..964975 | + | 369 | WP_005191486.1 | diacylglycerol kinase | - |
| FOC37_RS04275 () | 965103..965711 | + | 609 | WP_005191485.1 | transcriptional repressor LexA | - |
| FOC37_RS04280 () | 966245..966454 | + | 210 | WP_005191484.1 | CsbD family protein | - |
| FOC37_RS04285 () | 966981..967490 | - | 510 | WP_032907679.1 | zinc uptake transcriptional repressor Zur | - |
| FOC37_RS04290 () | 968054..968368 | + | 315 | WP_050089038.1 | hypothetical protein | - |
| FOC37_RS04295 () | 968413..969999 | + | 1587 | WP_080985879.1 | hypothetical protein | - |
| FOC37_RS04300 () | 970076..970348 | - | 273 | WP_050089037.1 | pyocin activator PrtN family protein | - |
| FOC37_RS04305 () | 970403..970576 | - | 174 | Protein_812 | polyphosphate kinase | - |
| FOC37_RS04310 () | 970908..971540 | - | 633 | WP_155967481.1 | hypothetical protein | - |
| FOC37_RS04315 () | 971537..971860 | - | 324 | WP_155967483.1 | hypothetical protein | - |
| FOC37_RS04320 () | 971857..972267 | - | 411 | WP_053011688.1 | hypothetical protein | - |
| FOC37_RS04325 () | 972260..972694 | - | 435 | WP_155967485.1 | HNH endonuclease | - |
| FOC37_RS04330 () | 973176..973436 | - | 261 | Protein_817 | hypothetical protein | - |
| FOC37_RS04335 () | 973447..973959 | - | 513 | WP_155967487.1 | hypothetical protein | - |
| FOC37_RS04340 () | 974132..974662 | - | 531 | WP_155967489.1 | HD family hydrolase | - |
| FOC37_RS04345 () | 974754..975575 | - | 822 | WP_155967491.1 | DUF2303 family protein | - |
| FOC37_RS04350 () | 975623..975979 | - | 357 | WP_046050063.1 | hypothetical protein | - |
| FOC37_RS04355 () | 977205..977852 | - | 648 | WP_155967493.1 | helix-turn-helix domain-containing protein | - |
| FOC37_RS04360 () | 977954..978217 | + | 264 | WP_155967495.1 | cell division protein | - |
| FOC37_RS04365 () | 978210..978743 | + | 534 | WP_155967497.1 | DNA-binding protein | - |
| FOC37_RS04370 () | 978933..980033 | + | 1101 | WP_050882733.1 | hypothetical protein | - |
| FOC37_RS04375 () | 980030..981160 | + | 1131 | WP_155967499.1 | site-specific DNA-methyltransferase | - |
| FOC37_RS04380 () | 981179..981880 | + | 702 | WP_155967501.1 | phage antirepressor KilAC domain-containing protein | - |
| FOC37_RS04385 () | 981877..982878 | + | 1002 | WP_155967503.1 | DUF968 domain-containing protein | - |
| FOC37_RS04390 () | 982904..983557 | + | 654 | WP_196774707.1 | antitermination protein | - |
| FOC37_RS04395 () | 983895..984110 | + | 216 | WP_155967507.1 | hypothetical protein | - |
| FOC37_RS22660 () | 984163..984327 | - | 165 | WP_186368035.1 | hypothetical protein | - |
| FOC37_RS04400 () | 984329..984814 | - | 486 | WP_050879812.1 | hypothetical protein | - |
| FOC37_RS04405 () | 985101..985472 | + | 372 | WP_050074309.1 | phage holin family protein | - |
| FOC37_RS04410 () | 985469..985747 | + | 279 | WP_050074310.1 | phage holin family protein | - |
| FOC37_RS04415 () | 985744..986139 | + | 396 | WP_050074311.1 | M15 family metallopeptidase | - |
| FOC37_RS04420 () | 986136..986480 | + | 345 | WP_155967509.1 | DUF2570 domain-containing protein | - |
| FOC37_RS04425 () | 986878..987126 | + | 249 | WP_050074313.1 | hypothetical protein | - |
| FOC37_RS04430 () | 987223..987456 | + | 234 | WP_042569622.1 | DNA polymerase III subunit theta | - |
| FOC37_RS04435 () | 987772..988311 | + | 540 | WP_155967511.1 | DUF1441 family protein | - |
| FOC37_RS04440 () | 988311..990413 | + | 2103 | WP_005182509.1 | phage terminase large subunit family protein | - |
| FOC37_RS04445 () | 990410..990625 | + | 216 | WP_032905657.1 | hypothetical protein | - |
| FOC37_RS04450 () | 990625..992106 | + | 1482 | WP_155967513.1 | phage portal protein | - |
| FOC37_RS04455 () | 992147..994090 | + | 1944 | WP_155967966.1 | ATP-dependent Clp protease proteolytic subunit 1 | VF |
| FOC37_RS04460 () | 994173..994499 | + | 327 | WP_050310617.1 | DUF2190 family protein | - |
| FOC37_RS04465 () | 994492..994767 | + | 276 | WP_155967516.1 | DNA breaking-rejoining protein | - |
| FOC37_RS04470 () | 994779..995333 | + | 555 | WP_005182524.1 | phage tail protein | - |
| FOC37_RS04475 () | 995330..995734 | + | 405 | WP_087785208.1 | phage tail protein | - |
| FOC37_RS04480 () | 995795..996280 | + | 486 | WP_050074323.1 | hypothetical protein | - |
| FOC37_RS04485 () | 996296..996714 | + | 419 | Protein_849 | phage tail protein | - |
| FOC37_RS04490 () | 996714..996995 | + | 282 | WP_155967518.1 | DUF4035 domain-containing protein | - |
| FOC37_RS04495 () | 997030..1000470 | + | 3441 | WP_155967520.1 | tape measure protein | - |
| FOC37_RS04500 () | 1000467..1000820 | + | 354 | WP_155967522.1 | phage tail protein | - |
| FOC37_RS04505 () | 1000829..1001584 | + | 756 | WP_050322316.1 | phage minor tail protein L | - |
| FOC37_RS04510 () | 1001587..1002300 | + | 714 | WP_087785213.1 | C40 family peptidase | - |
| FOC37_RS04515 () | 1002332..1002751 | + | 420 | WP_050322318.1 | hypothetical protein | - |
| FOC37_RS04520 () | 1002796..1003383 | + | 588 | WP_050322319.1 | tail assembly protein | - |
| FOC37_RS04525 () | 1003441..1007586 | + | 4146 | WP_196774708.1 | DUF1983 domain-containing protein | - |
| FOC37_RS04530 () | 1007678..1009051 | + | 1374 | WP_155967524.1 | hypothetical protein | - |
| FOC37_RS04535 () | 1009051..1009686 | + | 636 | WP_155967526.1 | tail fiber assembly protein | - |
| FOC37_RS04540 () | 1009742..1009987 | - | 246 | WP_155967528.1 | DinI-like family protein | - |
| FOC37_RS04545 () | 1009998..1010240 | - | 243 | WP_155967969.1 | hypothetical protein | - |
| FOC37_RS04550 () | 1010597..1011157 | + | 561 | WP_155967530.1 | SocA family protein | Antitoxin Detail |
| FOC37_RS04555 () | 1011154..1011561 | + | 408 | WP_155967532.1 | hypothetical protein | Toxin Detail |
| FOC37_RS04560 () | 1011582..1012670 | - | 1089 | WP_155967534.1 | hypothetical protein ; Integrase | Integrase |
| FOC37_RS04565 () | 1012760..1013809 | + | 1050 | WP_155967536.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| FOC37_RS04570 () | 1014124..1014342 | + | 219 | WP_005191465.1 | envelope stress response protein PspG | - |
| FOC37_RS04575 () | 1014632..1015615 | - | 984 | WP_005191463.1 | Quinone oxidoreductase 1 | VF |
| FOC37_RS04580 () | 1015898..1017304 | + | 1407 | WP_005191462.1 | replicative DNA helicase | - |
| FOC37_RS04585 () | 1017432..1018511 | + | 1080 | WP_005191461.1 | alanine racemase | - |
| FOC37_RS04590 () | 1018565..1019758 | + | 1194 | WP_005191460.1 | aspartate/tyrosine/aromatic aminotransferase | - |
| FOC37_RS04595 () | 1020109..1020462 | + | 354 | WP_032907677.1 | MmcQ/YjbR family DNA-binding protein | - |
| FOC37_RS04600 () | 1020601..1023432 | - | 2832 | WP_005191457.1 | UvrABC system protein A | VF |
| FOC37_RS04605 () | 1023833..1024381 | + | 549 | WP_005191456.1 | single-stranded DNA-binding protein SSB1 | - |
| FOC37_RS04610 () | 1024685..1026013 | - | 1329 | WP_155967538.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| FOC37_RS04615 () | 1026015..1026314 | - | 300 | WP_005191449.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| FOC37_RS04620 () | 1026585..1027253 | + | 669 | WP_005191448.1 | glutathione S-transferase | - |
| FOC37_RS04625 () | 1027624..1028991 | + | 1368 | WP_005191447.1 | NCS2 family permease | - |
| FOC37_RS04630 () | 1029210..1030859 | + | 1650 | WP_005191446.1 | Na+/H+ antiporter | - |
| FOC37_RS04635 () | 1030907..1031791 | - | 885 | WP_032907674.1 | LysR family transcriptional regulator | - |
| FOC37_RS04640 () | 1031935..1032360 | + | 426 | WP_032907671.1 | CidA/LrgA family protein | - |
| FOC37_RS04645 () | 1032353..1033042 | + | 690 | WP_053011709.1 | LrgB family protein | - |
| FOC37_RS04650 () | 1033123..1033848 | - | 726 | WP_170930747.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| FOC37_RS04655 () | 1033893..1035002 | - | 1110 | WP_005191435.1 | amino acid ABC transporter permease | - |
| FOC37_RS04660 () | 1035012..1036190 | - | 1179 | WP_005191434.1 | amino acid ABC transporter permease | - |
| FOC37_RS04665 () | 1036255..1037280 | - | 1026 | WP_005191430.1 | amino acid ABC transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|