MGE detailed information
MGE type: Prophage MGE length: 102654 bp
Accession: NZ_CP045975 Location: 2556356..2659009 Organism: Escherichia coli strain AUSMDU00002545 Replicon: chromosome
Accession: NZ_CP045975 Location: 2556356..2659009 Organism: Escherichia coli strain AUSMDU00002545 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJD97_RS12815 () | 2553034..2553339 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| GJD97_RS12820 () | 2553447..2554157 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| GJD97_RS12825 () | 2554160..2554720 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| GJD97_RS12830 () | 2554755..2555096 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| GJD97_RS12835 () | 2555231..2555557 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| GJD97_RS12845 () | 2556327..2556511 | - | 185 | Protein_2511 | DUF3596 domain-containing protein | - |
| GJD97_RS12850 () | 2556546..2556797 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| GJD97_RS12855 () | 2556870..2559341 | - | 2472 | WP_000048458.1 | exonuclease | - |
| GJD97_RS12860 () | 2559434..2559625 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| GJD97_RS12865 () | 2559622..2559810 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| GJD97_RS12875 () | 2560378..2560596 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| GJD97_RS12880 () | 2560668..2560967 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| GJD97_RS12885 () | 2561320..2561598 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GJD97_RS12890 () | 2561600..2561791 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| GJD97_RS12895 () | 2561812..2562183 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| GJD97_RS12900 () | 2562350..2563563 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| GJD97_RS12905 () | 2563612..2563896 | + | 285 | WP_072617017.1 | transcriptional regulator | - |
| GJD97_RS12910 () | 2563893..2564318 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| GJD97_RS12915 () | 2564341..2565303 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| GJD97_RS12920 () | 2565310..2566050 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| GJD97_RS12925 () | 2566076..2566845 | + | 770 | Protein_2526 | DUF1627 domain-containing protein | - |
| GJD97_RS12930 () | 2566861..2567256 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| GJD97_RS12935 () | 2567313..2567897 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| GJD97_RS12940 () | 2568013..2568117 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| GJD97_RS12945 () | 2568306..2568518 | + | 213 | WP_000887477.1 | type I toxin-antitoxin system Hok family toxin | - |
| GJD97_RS12950 () | 2568686..2568964 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| GJD97_RS12955 () | 2568966..2570015 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| GJD97_RS12960 () | 2570028..2570387 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GJD97_RS12965 () | 2570384..2571073 | + | 690 | WP_001059381.1 | antiterminator | - |
| GJD97_RS12985 () | 2571711..2572139 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| GJD97_RS12990 () | 2572136..2572391 | + | 256 | Protein_2536 | DUF3927 family protein | - |
| GJD97_RS12995 () | 2572618..2574468 | + | 1851 | WP_154074615.1 | SASA family carbohydrate esterase | - |
| GJD97_RS13000 () | 2574908..2575123 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| GJD97_RS13005 () | 2575128..2575472 | + | 345 | WP_000731241.1 | YdfR family protein | - |
| GJD97_RS13010 () | 2575523..2576055 | + | 533 | Protein_2540 | lysozyme | - |
| GJD97_RS13015 () | 2576326..2576895 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| GJD97_RS13020 () | 2576895..2577041 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| GJD97_RS13030 () | 2577269..2577454 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| GJD97_RS13035 () | 2577879..2578106 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| GJD97_RS13040 () | 2578148..2578513 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| GJD97_RS13045 () | 2578803..2579366 | + | 564 | WP_000958422.1 | terminase small subunit | - |
| GJD97_RS13050 () | 2579363..2581024 | + | 1662 | WP_038425863.1 | terminase large subunit | - |
| GJD97_RS13055 () | 2581088..2583025 | + | 1938 | WP_072617033.1 | phage major capsid protein | - |
| GJD97_RS13060 () | 2583070..2583291 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| GJD97_RS13065 () | 2583237..2585738 | + | 2502 | Protein_2550 | phage portal protein | - |
| GJD97_RS13070 () | 2585818..2586144 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| GJD97_RS13075 () | 2586154..2586504 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| GJD97_RS13080 () | 2586501..2586947 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| GJD97_RS13085 () | 2586944..2587288 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| GJD97_RS13090 () | 2587347..2588063 | + | 717 | WP_001275508.1 | tail protein | - |
| GJD97_RS13095 () | 2588069..2588443 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| GJD97_RS13100 () | 2588539..2588748 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| GJD97_RS13105 () | 2588801..2592043 | + | 3243 | WP_064234948.1 | phage tail tape measure protein | - |
| GJD97_RS13110 () | 2592036..2592377 | + | 342 | WP_000807954.1 | phage tail protein | - |
| GJD97_RS13115 () | 2592377..2592814 | + | 438 | WP_001179509.1 | phage minor tail protein L | - |
| GJD97_RS13120 () | 2593002..2596480 | + | 3479 | Protein_2561 | host specificity protein J | - |
| GJD97_RS13130 () | 2596548..2597147 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| GJD97_RS13135 () | 2597212..2598435 | + | 1224 | WP_071805583.1 | prophage tail fiber N-terminal domain-containing protein | - |
| GJD97_RS13140 () | 2598437..2598706 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| GJD97_RS13145 () | 2598820..2599395 | + | 576 | WP_001131642.1 | hypothetical protein | VF |
| GJD97_RS13150 () | 2600105..2600755 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| GJD97_RS13155 () | 2600905..2601300 | + | 396 | Protein_2567 | IS256 family transposase ISEic2 | Transposase |
| GJD97_RS13160 () | 2601338..2602876 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| GJD97_RS13165 () | 2602926..2603273 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| GJD97_RS13170 () | 2603270..2603650 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| GJD97_RS13175 () | 2603745..2604563 | + | 819 | Protein_2571 | IS256 family transposase IS1414 | Transposase |
| GJD97_RS13180 () | 2604613..2604855 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| GJD97_RS13185 () | 2605033..2605584 | - | 552 | Protein_2573 | Putative defective protein IntQ ; Integrase | Integrase |
| GJD97_RS13190 () | 2605572..2606810 | - | 1239 | Protein_2574 | exonuclease | - |
| GJD97_RS13195 () | 2606903..2607091 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| GJD97_RS13200 () | 2607088..2607276 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| GJD97_RS13210 () | 2607841..2608050 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| GJD97_RS13215 () | 2608051..2608689 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| GJD97_RS13220 () | 2608701..2608853 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| GJD97_RS13225 () | 2609146..2609484 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| GJD97_RS13230 () | 2609876..2610118 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| GJD97_RS13235 () | 2610102..2610527 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| GJD97_RS13240 () | 2610596..2611639 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| GJD97_RS13245 () | 2611632..2612093 | + | 462 | WP_000139447.1 | replication protein | - |
| GJD97_RS13250 () | 2612127..2612843 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| GJD97_RS13255 () | 2612876..2613157 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| GJD97_RS13260 () | 2613154..2613381 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| GJD97_RS13265 () | 2613374..2613685 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| GJD97_RS13270 () | 2613813..2614031 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| GJD97_RS13275 () | 2614033..2614590 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| GJD97_RS13280 () | 2614824..2615036 | + | 213 | WP_000935259.1 | type I toxin-antitoxin system Hok family toxin | - |
| GJD97_RS13285 () | 2615156..2615500 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| GJD97_RS13290 () | 2615622..2615894 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| GJD97_RS13295 () | 2615896..2616945 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| GJD97_RS13300 () | 2616958..2617263 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GJD97_RS13305 () | 2617326..2617880 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| GJD97_RS13310 () | 2618105..2618302 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| GJD97_RS13315 () | 2618437..2619150 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| GJD97_RS13330 () | 2619601..2620032 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| GJD97_RS13335 () | 2620029..2620284 | + | 256 | Protein_2600 | DUF3927 family protein | - |
| GJD97_RS13340 () | 2620510..2622360 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| GJD97_RS13345 () | 2622799..2623014 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| GJD97_RS13350 () | 2623019..2623363 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| GJD97_RS13355 () | 2623414..2623947 | + | 534 | WP_000992148.1 | lysozyme | - |
| GJD97_RS13360 () | 2624218..2624787 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| GJD97_RS13365 () | 2624787..2624933 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| GJD97_RS13370 () | 2625156..2625341 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| GJD97_RS13375 () | 2625866..2626180 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| GJD97_RS13380 () | 2626262..2626486 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| GJD97_RS13385 () | 2626873..2627418 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| GJD97_RS13390 () | 2627393..2629318 | + | 1926 | WP_001027230.1 | phage terminase large subunit family protein | - |
| GJD97_RS13395 () | 2629315..2629521 | + | 207 | WP_000198153.1 | gpW family protein | - |
| GJD97_RS13400 () | 2629518..2631119 | + | 1602 | WP_154074616.1 | phage portal protein | - |
| GJD97_RS13405 () | 2631100..2632419 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| GJD97_RS13410 () | 2632429..2632761 | + | 333 | WP_001457523.1 | head decoration protein | - |
| GJD97_RS13415 () | 2632817..2633842 | + | 1026 | WP_000063265.1 | major capsid protein | - |
| GJD97_RS13420 () | 2633884..2634282 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| GJD97_RS13425 () | 2634294..2634647 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| GJD97_RS13430 () | 2634662..2635195 | + | 534 | WP_000975020.1 | phage tail protein | - |
| GJD97_RS13435 () | 2635192..2635587 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| GJD97_RS13440 () | 2635595..2636347 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| GJD97_RS13445 () | 2636361..2636783 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| GJD97_RS13450 () | 2636810..2637223 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| GJD97_RS13455 () | 2637204..2639815 | + | 2612 | Protein_2624 | phage tail tape measure protein | - |
| GJD97_RS13460 () | 2639812..2640141 | + | 330 | WP_000847298.1 | phage tail protein | - |
| GJD97_RS13465 () | 2640141..2640839 | + | 699 | WP_072617001.1 | phage minor tail protein L | - |
| GJD97_RS13470 () | 2640850..2641593 | + | 744 | WP_054191786.1 | C40 family peptidase | - |
| GJD97_RS13475 () | 2641539..2642168 | + | 630 | WP_064562156.1 | tail assembly protein | - |
| GJD97_RS13480 () | 2642409..2645888 | + | 3480 | WP_072616999.1 | host specificity protein J | - |
| GJD97_RS13485 () | 2645956..2646555 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| GJD97_RS13490 () | 2646620..2647933 | + | 1314 | WP_072617028.1 | ISNCY family transposase KIS | Transposase |
| GJD97_RS13495 () | 2647935..2648204 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| GJD97_RS13500 () | 2648318..2648893 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| GJD97_RS13505 () | 2648966..2649595 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| GJD97_RS13510 () | 2649677..2650318 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| GJD97_RS13515 () | 2650480..2650722 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| GJD97_RS13520 () | 2650854..2652137 | + | 1284 | Protein_2637 | MHS family MFS transporter YdfJ | - |
| GJD97_RS13525 () | 2652226..2653686 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| GJD97_RS13530 () | 2653722..2653925 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| GJD97_RS13535 () | 2654102..2654761 | - | 660 | WP_154074617.1 | DNA-binding transcriptional regulator YdfH | - |
| GJD97_RS13540 () | 2654850..2655596 | - | 747 | WP_000636568.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| GJD97_RS13545 () | 2655733..2657778 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| GJD97_RS13550 () | 2657823..2658341 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| GJD97_RS13555 () | 2658617..2659009 | + | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| GJD97_RS13560 () | 2659264..2660154 | + | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| GJD97_RS13565 () | 2660373..2660468 | - | 96 | WP_000901365.1 | protein MgtS | - |
| GJD97_RS13570 () | 2660576..2661547 | - | 972 | WP_001310251.1 | transcriptional regulator FtrA | - |
| GJD97_RS13575 () | 2661642..2662037 | + | 396 | WP_001271101.1 | rhodanese | - |
| GJD97_RS13580 () | 2662078..2663265 | - | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA1008 | NC_002695 | 2157035..2254487 | 0.006 |