MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 97268 bp
Accession: NZ_CP045964 Location: 1..97268 Organism: Mycobacterium intracellulare subsp. chimaera strain AUSMDU00007395 Replicon: plasmid pAUSMDU00007395_01
Accession: NZ_CP045964 Location: 1..97268 Organism: Mycobacterium intracellulare subsp. chimaera strain AUSMDU00007395 Replicon: plasmid pAUSMDU00007395_01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJE02_RS28850 () | 1..1212 | + | 1212 | WP_023363518.1 | hypothetical protein | - |
| GJE02_RS28855 () | 1325..1666 | - | 342 | WP_007172375.1 | hypothetical protein | - |
| GJE02_RS28860 () | 1663..3369 | - | 1707 | WP_023363520.1 | PPE domain-containing protein | - |
| GJE02_RS28865 () | 3386..3691 | - | 306 | WP_007172377.1 | hypothetical protein | - |
| GJE02_RS28870 () | 3767..4081 | - | 315 | WP_041321561.1 | hypothetical protein | - |
| GJE02_RS28875 () | 4109..5629 | - | 1521 | WP_007172379.1 | DUF4226 domain-containing protein | - |
| GJE02_RS28880 () | 5851..6606 | - | 756 | WP_074021258.1 | DUF2637 domain-containing protein | - |
| GJE02_RS28885 () | 7408..8130 | + | 723 | WP_139315444.1 | ParA family protein | - |
| GJE02_RS28890 () | 8133..8894 | + | 762 | WP_023363524.1 | hypothetical protein | - |
| GJE02_RS28895 () | 8976..9260 | + | 285 | WP_007172404.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GJE02_RS28900 () | 9257..9514 | + | 258 | WP_007172405.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| GJE02_RS28905 () | 9729..10022 | - | 294 | WP_007172406.1 | hypothetical protein | - |
| GJE02_RS28910 () | 10039..11037 | - | 999 | WP_101930848.1 | hypothetical protein | - |
| GJE02_RS28915 () | 11749..12318 | + | 570 | WP_007172408.1 | hypothetical protein | - |
| GJE02_RS28920 () | 12308..13408 | + | 1101 | WP_007172409.1 | tyrosine-type recombinase/integrase | - |
| GJE02_RS28925 () | 13527..13739 | + | 213 | WP_007172410.1 | hypothetical protein | - |
| GJE02_RS28930 () | 14316..15962 | + | 1647 | WP_007172412.1 | ParB/RepB/Spo0J family partition protein | - |
| GJE02_RS28935 () | 16726..16959 | + | 234 | WP_007172413.1 | glutaredoxin-like protein NrdH | - |
| GJE02_RS28940 () | 16993..17286 | + | 294 | WP_007172414.1 | hypothetical protein | - |
| GJE02_RS28945 () | 17286..18572 | + | 1287 | WP_007172415.1 | hypothetical protein | - |
| GJE02_RS28950 () | 18569..18739 | + | 171 | WP_007172416.1 | hypothetical protein | - |
| GJE02_RS28955 () | 18763..19479 | + | 717 | WP_007172417.1 | hypothetical protein | - |
| GJE02_RS28960 () | 19455..19613 | - | 159 | WP_023363534.1 | hypothetical protein | - |
| GJE02_RS28965 () | 19952..20491 | + | 540 | WP_007172419.1 | hypothetical protein | - |
| GJE02_RS28970 () | 20899..21294 | + | 396 | WP_007172420.1 | hypothetical protein | - |
| GJE02_RS28975 () | 21324..21737 | + | 414 | WP_023363536.1 | hypothetical protein | - |
| GJE02_RS28980 () | 22286..22522 | + | 237 | WP_007172423.1 | hypothetical protein | - |
| GJE02_RS28985 () | 22643..23620 | + | 978 | WP_007172422.1 | DUF3560 domain-containing protein | - |
| GJE02_RS28990 () | 24042..24503 | + | 462 | WP_023363541.1 | hypothetical protein | - |
| GJE02_RS28995 () | 24586..24888 | + | 303 | WP_040624393.1 | hypothetical protein | - |
| GJE02_RS29000 () | 25309..25767 | + | 459 | WP_023363543.1 | hypothetical protein | - |
| GJE02_RS29005 () | 25802..25975 | + | 174 | WP_007172699.1 | hypothetical protein | - |
| GJE02_RS29010 () | 26397..27344 | + | 948 | WP_007172301.1 | DUF4192 domain-containing protein | - |
| GJE02_RS29015 () | 27762..28106 | + | 345 | WP_007172302.1 | hypothetical protein | - |
| GJE02_RS29020 () | 28203..28739 | + | 537 | WP_007172303.1 | hypothetical protein | - |
| GJE02_RS29025 () | 29157..30203 | + | 1047 | WP_007172304.1 | DUF945 domain-containing protein | - |
| GJE02_RS29030 () | 30560..31084 | - | 525 | WP_007172305.1 | hypothetical protein | - |
| GJE02_RS29035 () | 31173..31652 | - | 480 | WP_007172306.1 | hypothetical protein | - |
| GJE02_RS29040 () | 31907..37765 | + | 5859 | WP_007172307.1 | Multifunctional conjugation protein TraI | Relaxase |
| GJE02_RS29045 () | 37870..38142 | + | 273 | WP_040624325.1 | hypothetical protein | - |
| GJE02_RS29050 () | 38183..39550 | - | 1368 | WP_023363493.1 | hypothetical protein | - |
| GJE02_RS29055 () | 39547..40134 | - | 588 | WP_007172311.1 | hypothetical protein | - |
| GJE02_RS29060 () | 40202..40723 | - | 522 | WP_007172312.1 | hypothetical protein | - |
| GJE02_RS29065 () | 41546..42112 | - | 567 | WP_007172315.1 | hypothetical protein | - |
| GJE02_RS29070 () | 42192..42341 | - | 150 | WP_007172316.1 | hypothetical protein | - |
| GJE02_RS29075 () | 42334..42750 | - | 417 | WP_139315438.1 | type IV secretion system protein VirD4 | - |
| GJE02_RS29080 () | 42897..43985 | - | 1089 | WP_074021350.1 | HD domain-containing protein | - |
| GJE02_RS29085 () | 44331..44597 | - | 267 | WP_007172320.1 | hypothetical protein | - |
| GJE02_RS29090 () | 44594..45997 | - | 1404 | WP_007172321.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GJE02_RS29095 () | 46000..46665 | - | 666 | WP_040624365.1 | hypothetical protein | - |
| GJE02_RS29100 () | 46649..47083 | - | 435 | WP_007172323.1 | hypothetical protein | - |
| GJE02_RS29105 () | 47182..47487 | + | 306 | WP_007172324.1 | hypothetical protein | - |
| GJE02_RS29110 () | 47484..48698 | + | 1215 | WP_007172325.1 | hypothetical protein | - |
| GJE02_RS29115 () | 48715..49641 | + | 927 | WP_007172326.1 | conjugal transfer protein | - |
| GJE02_RS29120 () | 49655..49882 | + | 228 | WP_007172327.1 | hypothetical protein | - |
| GJE02_RS29125 () | 49908..50156 | + | 249 | WP_007172328.1 | hypothetical protein | - |
| GJE02_RS29130 () | 50177..50461 | + | 285 | WP_007172329.1 | hypothetical protein | - |
| GJE02_RS29135 () | 51066..53516 | + | 2451 | WP_116671175.1 | ATP-binding protein | - |
| GJE02_RS29140 () | 53513..55582 | + | 2070 | WP_007172331.1 | hypothetical protein | - |
| GJE02_RS29145 () | 55616..55759 | - | 144 | WP_154074434.1 | hypothetical protein | - |
| GJE02_RS29150 () | 55911..56237 | - | 327 | WP_007172333.1 | hypothetical protein | - |
| GJE02_RS29155 () | 56245..58077 | - | 1833 | WP_007172334.1 | ESX-5 secretion system protein EccA5 | VF |
| GJE02_RS29160 () | 58100..59692 | - | 1593 | WP_007172335.1 | ESX-5 secretion system protein EccE5 | VF |
| GJE02_RS29165 () | 59692..61392 | - | 1701 | WP_040624331.1 | Mycosin-5 | VF |
| GJE02_RS29170 () | 61409..63052 | - | 1644 | WP_080674295.1 | ESX-5 secretion system protein EccD5 | VF |
| GJE02_RS29180 () | 64513..65433 | - | 921 | WP_007172339.1 | ESX-5 secretion-associated protein EspG5 | VF |
| GJE02_RS29185 () | 65512..65796 | - | 285 | WP_007172340.1 | ESAT-6-like protein EsxN | VF |
| GJE02_RS29190 () | 65841..66137 | - | 297 | WP_007172341.1 | WXG100 family type VII secretion target | - |
| GJE02_RS29195 () | 66281..67435 | - | 1155 | WP_007172342.1 | putative PPE family protein PPE51 | VF |
| GJE02_RS29200 () | 67465..67761 | - | 297 | WP_007172343.1 | PE family protein | - |
| GJE02_RS29205 () | 67855..72081 | - | 4227 | WP_007172344.1 | ESX-5 secretion system protein EccC5 | VF |
| GJE02_RS29210 () | 72078..73523 | - | 1446 | WP_101930849.1 | ESX-5 secretion system ATPase EccB5 | VF |
| GJE02_RS29215 () | 73637..74677 | - | 1041 | WP_023363502.1 | Murein DD-endopeptidase MepH | VF |
| GJE02_RS29220 () | 74763..75866 | - | 1104 | WP_051404593.1 | hypothetical protein | - |
| GJE02_RS29225 () | 75930..76793 | - | 864 | WP_142383462.1 | hypothetical protein | - |
| GJE02_RS29230 () | 77006..77269 | + | 264 | WP_007172349.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| GJE02_RS29235 () | 77272..77688 | + | 417 | WP_040624374.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GJE02_RS29240 () | 77970..79301 | - | 1332 | WP_023363507.1 | IS256 family transposase IS2606 | Transposase |
| GJE02_RS29245 () | 79444..80025 | + | 582 | WP_007172352.1 | IS607 family transposase IS1535 | Transposase |
| GJE02_RS29250 () | 80025..81425 | + | 1401 | Protein_79 | IS607 family transposase IS1535 | Transposase |
| GJE02_RS29255 () | 81482..82654 | - | 1173 | WP_080691094.1 | DDE-type integrase/transposase/recombinase | - |
| GJE02_RS29260 () | 82576..82866 | - | 291 | WP_042910035.1 | helix-turn-helix domain-containing protein | - |
| GJE02_RS29265 () | 82994..83257 | + | 264 | Protein_82 | transposase | - |
| GJE02_RS29270 () | 83363..83501 | + | 139 | Protein_83 | type II toxin-antitoxin system VapC family toxin | - |
| GJE02_RS29275 () | 83578..84300 | - | 723 | WP_023363510.1 | hypothetical protein | - |
| GJE02_RS29280 () | 84297..85199 | - | 903 | WP_074021534.1 | hypothetical protein | - |
| GJE02_RS29285 () | 86631..87062 | - | 432 | WP_139315439.1 | hypothetical protein | - |
| GJE02_RS29290 () | 87293..87565 | - | 273 | WP_139315440.1 | hypothetical protein | - |
| GJE02_RS29295 () | 87689..88360 | - | 672 | WP_139315441.1 | hypothetical protein | - |
| GJE02_RS29300 () | 88470..89549 | - | 1080 | WP_007172361.1 | hypothetical protein | - |
| GJE02_RS29305 () | 89664..90362 | - | 699 | WP_139315442.1 | hypothetical protein | - |
| GJE02_RS29310 () | 90376..91083 | - | 708 | WP_139315443.1 | hypothetical protein | - |
| GJE02_RS29315 () | 91301..91594 | - | 294 | WP_007172365.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GJE02_RS29320 () | 91591..91842 | - | 252 | WP_040624378.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| GJE02_RS29325 () | 91948..92454 | - | 507 | WP_007172367.1 | helix-turn-helix domain-containing protein | - |
| GJE02_RS29330 () | 92761..93198 | + | 438 | WP_007172368.1 | WhiB family transcriptional regulator | - |
| GJE02_RS29335 () | 93254..93844 | + | 591 | WP_023363514.1 | hypothetical protein | - |
| GJE02_RS29340 () | 93807..94091 | + | 285 | WP_007172369.1 | hypothetical protein | - |
| GJE02_RS29345 () | 94468..96330 | + | 1863 | WP_023363516.1 | helicase associated domain-containing protein | - |
| GJE02_RS29350 () | 96491..96907 | + | 417 | WP_007172373.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|