MGE detailed information
MGE type: Genomic_island MGE length: 21813 bp
Accession: NZ_CP045941 Location: 357840..379652 Organism: Shigella flexneri 2a strain AUSMDU00010535 Replicon: chromosome
Accession: NZ_CP045941 Location: 357840..379652 Organism: Shigella flexneri 2a strain AUSMDU00010535 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJE14_RS01675 (352952) | 352952..353287 | + | 336 | WP_000626187.1 | universal stress protein UspB | - |
| GJE14_RS01680 (353358) | 353358..354857 | - | 1500 | WP_000902779.1 | inorganic phosphate transporter PitA | - |
| GJE14_RS01685 (355089) | 355089..356288 | + | 1200 | WP_000439213.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| GJE14_RS01690 (356817) | 356817..357514 | + | 698 | WP_227804279.1 | IS1 family transposase | - |
| GJE14_RS01695 (357532) | 357532..357824 | - | 293 | Protein_326 | transposase | - |
| GJE14_RS01700 (357960) | 357960..359114 | + | 1155 | WP_232111812.1 | O-antigen ligase family protein | - |
| GJE14_RS01705 (359114) | 359114..359848 | + | 735 | WP_000245840.1 | helix-turn-helix transcriptional regulator | - |
| GJE14_RS01710 (360316) | 360316..361077 | + | 762 | WP_005090407.1 | hypothetical protein | VF |
| GJE14_RS01715 (361121) | 361121..362200 | + | 1080 | WP_005052551.1 | hypothetical protein | VF |
| GJE14_RS01730 (363775) | 363775..364662 | + | 888 | Protein_332 | hypothetical protein | VF |
| GJE14_RS01740 (365430) | 365430..365699 | + | 270 | Protein_334 | fimbrial biogenesis outer membrane usher protein | - |
| GJE14_RS01745 (365838) | 365838..366350 | + | 513 | WP_000751953.1 | hypothetical protein | - |
| GJE14_RS01750 (366457) | 366457..367218 | - | 762 | WP_011069549.1 | Transcriptional regulatory protein RcsB | VF |
| GJE14_RS01755 (367464) | 367464..368228 | + | 765 | WP_000442141.1 | winged helix-turn-helix domain-containing protein | - |
| GJE14_RS01760 (368221) | 368221..368697 | + | 477 | WP_000182502.1 | hypothetical protein | - |
| GJE14_RS01765 (368784) | 368784..369782 | - | 999 | Protein_339 | DUF2776 domain-containing protein | - |
| GJE14_RS01770 (370200) | 370200..371789 | + | 1590 | WP_000643692.1 | DUF4049 domain-containing protein | - |
| GJE14_RS01775 (372051) | 372051..373673 | + | 1623 | WP_005052620.1 | DUF4049 domain-containing protein | - |
| GJE14_RS25980 (373863) | 373863..373976 | + | 114 | WP_001296785.1 | protein YhiY | - |
| GJE14_RS01780 (374039) | 374039..375106 | + | 1068 | WP_000361470.1 | HlyD family secretion protein | - |
| GJE14_RS01785 (375103) | 375103..377838 | + | 2736 | WP_000149170.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| GJE14_RS01790 (377838) | 377838..378962 | + | 1125 | WP_001216257.1 | ABC transporter permease | - |
| GJE14_RS01795 (379021) | 379021..379296 | + | 276 | WP_001259384.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GJE14_RS01800 (379293) | 379293..379652 | + | 360 | WP_000593555.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GJE14_RS01805 (379772) | 379772..380173 | - | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| GJE14_RS01810 (380179) | 380179..380985 | - | 807 | WP_000173660.1 | nickel import ATP-binding protein NikE | - |
| GJE14_RS01815 (380982) | 380982..381746 | - | 765 | WP_001136253.1 | nickel import ATP-binding protein NikD | - |
| GJE14_RS01820 (381746) | 381746..382579 | - | 834 | WP_001008973.1 | nickel ABC transporter permease subunit NikC | - |
| GJE14_RS01825 (382576) | 382576..383520 | - | 945 | WP_000947076.1 | nickel ABC transporter permease subunit NikB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Shigella flexneri 5a str. M90T | Genomic island | TA120378 | NZ_CP037923 | 4222298..4243335 | 0.002 |