MGE detailed information
MGE type: Genomic_island MGE length: 10154 bp
Accession: NZ_CP045863 Location: 3669111..3679264 Organism: Escherichia coli O157:H7 strain ATCC 43890 Replicon: chromosome
Accession: NZ_CP045863 Location: 3669111..3679264 Organism: Escherichia coli O157:H7 strain ATCC 43890 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GIX96_RS18375 () | 3664309..3665517 | - | 1209 | WP_001301837.1 | propionate kinase | - |
| GIX96_RS18380 () | 3665543..3666874 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| GIX96_RS18385 () | 3666896..3667885 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| GIX96_RS18390 () | 3667984..3668922 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| GIX96_RS27090 () | 3669237..3669455 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| GIX96_RS18400 () | 3669711..3670250 | + | 540 | WP_000675739.1 | hypothetical protein | - |
| GIX96_RS18405 () | 3670272..3671459 | + | 1188 | WP_000484640.1 | YhaC family protein | - |
| GIX96_RS18415 () | 3672088..3673233 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| GIX96_RS18420 () | 3673330..3674220 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| GIX96_RS18425 () | 3674250..3675020 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| GIX96_RS18430 () | 3675036..3676370 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| GIX96_RS18435 () | 3676745..3678316 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| GIX96_RS18440 () | 3678465..3678800 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| GIX96_RS18445 () | 3678800..3679264 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| GIX96_RS18450 () | 3679319..3680128 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| GIX96_RS18455 () | 3680377..3681657 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| GIX96_RS18460 () | 3681680..3682153 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| GIX96_RS18465 () | 3682164..3682943 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| GIX96_RS18470 () | 3682933..3683811 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| GIX96_RS18475 () | 3683829..3684263 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0 |