MGE detailed information
MGE type: IScluster/Tn MGE length: 43068 bp
Accession: NZ_CP045785 Location: 127607..170674 Organism: Shigella dysenteriae strain CFSAN029786 Replicon: plasmid p1CFSAN029786
Accession: NZ_CP045785 Location: 127607..170674 Organism: Shigella dysenteriae strain CFSAN029786 Replicon: plasmid p1CFSAN029786
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GH770_RS25080 (GH770_25080) | 124324..124551 | + | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| GH770_RS25085 (GH770_25085) | 124551..124949 | + | 399 | WP_000911318.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GH770_RS25090 (GH770_25090) | 124958..127165 | - | 2208 | WP_000009311.1 | type IV conjugative transfer system coupling protein TraD | - |
| GH770_RS25095 (GH770_25095) | 127413..128110 | + | 698 | WP_225322336.1 | IS1 family transposase IS1X2 | Transposase |
| GH770_RS25100 (GH770_25100) | 128126..128797 | + | 672 | Protein_159 | IS630 family transposase IS630 | Transposase |
| GH770_RS25105 (GH770_25105) | 128951..129895 | - | 945 | WP_005027201.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| GH770_RS25110 (GH770_25110) | 129960..130910 | - | 951 | WP_005045525.1 | virulence factor VirK | - |
| GH770_RS25115 (GH770_25115) | 130915..132003 | - | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| GH770_RS25120 (GH770_25120) | 132006..132848 | - | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| GH770_RS26650 | 133331..133483 | + | 153 | Protein_164 | hypothetical protein | - |
| GH770_RS25130 (GH770_25130) | 133535..134231 | + | 697 | Protein_165 | IS1 family transposase IS1X2 | Transposase |
| GH770_RS25135 (GH770_25135) | 134249..134731 | - | 483 | Protein_166 | Protein kinase OspG | VF |
| GH770_RS26655 | 134814..134983 | - | 170 | Protein_167 | type II toxin-antitoxin system toxin YacB | - |
| GH770_RS25140 (GH770_25140) | 134983..135252 | - | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| GH770_RS25145 (GH770_25145) | 135460..137097 | - | 1638 | WP_000936802.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| GH770_RS25150 (GH770_25150) | 137359..137466 | - | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| GH770_RS25155 (GH770_25155) | 137490..137795 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| GH770_RS25160 (GH770_25160) | 137797..138015 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| GH770_RS25165 (GH770_25165) | 138259..139487 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| GH770_RS25170 (GH770_25170) | 139944..140216 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| GH770_RS25175 (GH770_25175) | 140311..141524 | + | 1214 | WP_167544920.1 | IS3 family transposase IS629 | Transposase |
| GH770_RS25185 (GH770_25185) | 141588..142718 | + | 1131 | WP_050546159.1 | IS91 family transposase ISSbo1 | Transposase |
| GH770_RS25190 (GH770_25190) | 142913..144004 | - | 1092 | Protein_177 | IS66 family transposase ISEc49 | Transposase |
| GH770_RS25195 (GH770_25195) | 144012..144579 | + | 568 | Protein_178 | plasmid segregation protein ParM | - |
| GH770_RS26660 | 144582..144764 | + | 183 | WP_241547534.1 | plasmid partitioning/stability family protein | - |
| GH770_RS26010 | 145040..145177 | + | 138 | WP_000766699.1 | hypothetical protein | - |
| GH770_RS25205 (GH770_25205) | 145309..145584 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GH770_RS25210 (GH770_25210) | 145584..145868 | - | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| GH770_RS25215 (GH770_25215) | 146320..146571 | + | 252 | WP_000433928.1 | transporter | - |
| GH770_RS25220 (GH770_25220) | 146621..146830 | + | 210 | Protein_184 | peptidoglycan-binding protein | - |
| GH770_RS26665 | 146912..147013 | - | 102 | Protein_185 | ATP-binding protein | - |
| GH770_RS25225 (GH770_25225) | 147165..147521 | + | 357 | WP_005041107.1 | IS66 family transposase IS682 | Transposase |
| GH770_RS25230 (GH770_25230) | 147518..147868 | + | 351 | WP_000624671.1 | IS66 family transposase IS682 | Transposase |
| GH770_RS25235 (GH770_25235) | 147899..149491 | + | 1593 | WP_046891721.1 | IS66 family transposase ISEc43 | Transposase |
| GH770_RS26015 | 149498..149629 | - | 132 | Protein_189 | ATP-binding protein | - |
| GH770_RS25240 (GH770_25240) | 149848..150522 | + | 675 | WP_046891833.1 | IS66 family transposase ISSfl3 | Transposase |
| GH770_RS25245 (GH770_25245) | 150519..150683 | + | 165 | Protein_191 | IS66 family transposase ISSfl3 | Transposase |
| GH770_RS25250 (GH770_25250) | 150832..150993 | + | 162 | Protein_192 | IS110 family transposase ISEc11 | Transposase |
| GH770_RS25255 (GH770_25255) | 151066..152234 | + | 1169 | WP_134806647.1 | IS3 family transposase ISLad1 | Transposase |
| GH770_RS25260 (GH770_25260) | 153252..154211 | + | 960 | WP_046891834.1 | plasmid segregation protein ParM | - |
| GH770_RS25265 (GH770_25265) | 154211..154606 | + | 396 | WP_000445931.1 | plasmid partitioning/stability family protein | - |
| GH770_RS25275 (GH770_25275) | 156095..156460 | + | 366 | WP_073691780.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| GH770_RS25280 (GH770_25280) | 156506..157350 | + | 845 | WP_094096542.1 | IS5 family transposase ISSfl7 | Transposase |
| GH770_RS26670 | 157363..157467 | + | 105 | Protein_199 | hypothetical protein | - |
| GH770_RS25285 (GH770_25285) | 157522..158271 | - | 750 | WP_000828661.1 | phosphatase PAP2 family protein | - |
| GH770_RS25295 (GH770_25295) | 159077..159280 | + | 204 | Protein_202 | IS3 family transposase IS600 | Transposase |
| GH770_RS25300 (GH770_25300) | 159407..159928 | + | 522 | Protein_203 | reverse transcriptase domain-containing protein | - |
| GH770_RS25305 (GH770_25305) | 159984..161197 | + | 1214 | WP_171769624.1 | IS3 family transposase IS629 | Transposase |
| GH770_RS25315 (GH770_25315) | 161356..162524 | + | 1169 | WP_094096743.1 | IS3 family transposase ISLad1 | Transposase |
| GH770_RS25320 (GH770_25320) | 162532..162852 | + | 321 | Protein_206 | group II intron maturase-specific domain-containing protein | - |
| GH770_RS25325 (GH770_25325) | 162894..164122 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| GH770_RS25330 (GH770_25330) | 164232..164351 | + | 120 | Protein_208 | transposase domain-containing protein | - |
| GH770_RS25335 (GH770_25335) | 164391..164513 | - | 123 | Protein_209 | IS1 family transposase | - |
| GH770_RS25340 (GH770_25340) | 164552..166090 | - | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| GH770_RS25345 (GH770_25345) | 166139..166486 | - | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| GH770_RS25350 (GH770_25350) | 166483..166863 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| GH770_RS25355 (GH770_25355) | 166922..167114 | - | 193 | Protein_213 | IS1 family transposase | - |
| GH770_RS25360 (GH770_25360) | 167287..167457 | + | 171 | Protein_214 | transposase | - |
| GH770_RS25365 (GH770_25365) | 167468..169120 | - | 1653 | WP_046891837.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| GH770_RS25375 (GH770_25375) | 170847..171165 | - | 319 | Protein_217 | fimbria/pilus outer membrane usher protein | - |
| GH770_RS25380 (GH770_25380) | 171309..174617 | - | 3309 | WP_069375727.1 | outer membrane autotransporter IcsA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|