MGE detailed information
MGE type: Genomic_island MGE length: 47286 bp
Accession: NZ_CP045712 Location: 2202683..2249968 Organism: Escherichia coli strain FHI_NMBU_11 Replicon: chromosome
Accession: NZ_CP045712 Location: 2202683..2249968 Organism: Escherichia coli strain FHI_NMBU_11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GHT02_RS10680 () | 2199869..2201917 | - | 2049 | WP_000792540.1 | TonB-dependent siderophore receptor IreA | - |
| GHT02_RS10685 () | 2202683..2203789 | + | 1107 | Protein_2095 | IS110 family transposase | - |
| GHT02_RS10690 () | 2203892..2204200 | - | 309 | Protein_2096 | IS3 family transposase ISLad1 | Transposase |
| GHT02_RS10695 () | 2204217..2204897 | - | 681 | Protein_2097 | transposase | - |
| GHT02_RS10700 () | 2205100..2206131 | - | 1032 | WP_000416155.1 | LacI family DNA-binding transcriptional regulator | - |
| GHT02_RS10705 () | 2206402..2206845 | + | 444 | WP_000916813.1 | PTS sugar transporter subunit IIA | - |
| GHT02_RS10710 () | 2206861..2207148 | + | 288 | WP_000705929.1 | PTS sugar transporter subunit IIB | - |
| GHT02_RS10715 () | 2207161..2208417 | + | 1257 | WP_000345351.1 | PTS ascorbate transporter subunit IIC | - |
| GHT02_RS10720 () | 2208634..2208918 | - | 285 | WP_000436078.1 | IS66 family transposase IS682 | Transposase |
| GHT02_RS10725 () | 2209339..2210352 | - | 1014 | WP_000107483.1 | aldose 1-epimerase family protein | - |
| GHT02_RS10730 () | 2210364..2211680 | - | 1317 | WP_000998354.1 | L-fucose:H+ symporter permease | - |
| GHT02_RS10735 () | 2211708..2212628 | - | 921 | WP_000350265.1 | ribokinase | - |
| GHT02_RS10740 () | 2212933..2213715 | + | 783 | WP_001298267.1 | DeoR family transcriptional regulator | - |
| GHT02_RS10745 () | 2213717..2213943 | - | 227 | Protein_2107 | acetolactate synthase small subunit | - |
| GHT02_RS10750 () | 2214623..2214760 | - | 138 | WP_001371476.1 | hypothetical protein | - |
| GHT02_RS10755 () | 2215110..2215517 | - | 408 | WP_074405438.1 | inovirus-type Gp2 protein | - |
| GHT02_RS10760 () | 2215704..2215901 | - | 198 | WP_000553833.1 | inovirus-type Gp2 protein | - |
| GHT02_RS10765 () | 2216149..2216574 | - | 426 | WP_033801398.1 | hypothetical protein | - |
| GHT02_RS10770 () | 2216571..2216954 | - | 384 | WP_024175299.1 | hypothetical protein | - |
| GHT02_RS10775 () | 2217325..2217924 | - | 600 | WP_024213475.1 | inovirus-type Gp2 protein | - |
| GHT02_RS10780 () | 2219201..2219992 | + | 792 | WP_001335904.1 | hypothetical protein | - |
| GHT02_RS10785 () | 2220378..2220584 | + | 207 | WP_001371489.1 | AlpA family transcriptional regulator | - |
| GHT02_RS10790 () | 2220678..2221280 | + | 603 | WP_000813431.1 | hypothetical protein | - |
| GHT02_RS10795 () | 2221753..2221968 | + | 216 | WP_001327829.1 | hypothetical protein | - |
| GHT02_RS10800 () | 2222110..2222406 | + | 297 | Protein_2118 | transposase | - |
| GHT02_RS10805 () | 2223656..2224831 | + | 1176 | WP_000263652.1 | hypothetical protein | - |
| GHT02_RS10810 () | 2225690..2226424 | - | 735 | WP_001144542.1 | restriction endonuclease | - |
| GHT02_RS10815 () | 2226600..2227202 | - | 603 | Protein_2121 | hypothetical protein ; Integrase | Integrase |
| GHT02_RS10820 () | 2227434..2228378 | + | 945 | WP_032351765.1 | hypothetical protein | - |
| GHT02_RS10825 () | 2228552..2229310 | - | 759 | WP_024213478.1 | hypothetical protein | - |
| GHT02_RS10830 () | 2229818..2230690 | + | 873 | WP_001069783.1 | GTPase family protein | - |
| GHT02_RS10835 () | 2231062..2233908 | + | 2847 | WP_000820514.1 | Ag43/Cah family autotransporter adhesin | - |
| GHT02_RS10840 () | 2233979..2234212 | + | 234 | WP_001117568.1 | DUF905 family protein | - |
| GHT02_RS10845 () | 2234303..2235121 | + | 819 | WP_033884686.1 | DUF945 domain-containing protein | - |
| GHT02_RS10850 () | 2235211..2235696 | + | 486 | WP_000214386.1 | antirestriction protein | - |
| GHT02_RS10855 () | 2235712..2236188 | + | 477 | WP_001186727.1 | RadC family protein | - |
| GHT02_RS10860 () | 2236251..2236472 | + | 222 | WP_000692358.1 | DUF987 domain-containing protein | - |
| GHT02_RS10865 () | 2236635..2237009 | + | 375 | WP_024175300.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| GHT02_RS10870 () | 2237056..2237433 | + | 378 | WP_000854896.1 | TA system toxin CbtA family protein | Toxin Detail |
| GHT02_RS10875 () | 2237430..2237918 | + | 489 | WP_000761662.1 | hypothetical protein | - |
| GHT02_RS10880 () | 2237930..2238127 | + | 198 | WP_000839256.1 | DUF957 domain-containing protein | - |
| GHT02_RS10885 () | 2238212..2239078 | + | 867 | WP_000014510.1 | DUF4942 domain-containing protein | - |
| GHT02_RS10890 () | 2239150..2239413 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| GHT02_RS10895 () | 2239410..2239736 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GHT02_RS10900 () | 2240617..2242155 | + | 1539 | WP_001187200.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| GHT02_RS10905 () | 2242521..2243855 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| GHT02_RS10910 () | 2243935..2246082 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| GHT02_RS10915 () | 2246141..2247598 | + | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| GHT02_RS10920 () | 2247835..2249352 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| GHT02_RS10925 () | 2249471..2249644 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| GHT02_RS10930 () | 2249672..2249968 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| GHT02_RS10935 () | 2250195..2250467 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| GHT02_RS10940 () | 2250479..2250709 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| GHT02_RS10945 () | 2250890..2252521 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| GHT02_RS10950 () | 2252518..2253237 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|