MGE detailed information
MGE type: IS/Tn MGE length: 156 bp
Accession: NZ_CP045648 Location: 1176731..1176886 Organism: Staphylococcus epidermidis strain IRL01 Replicon: chromosome
Accession: NZ_CP045648 Location: 1176731..1176886 Organism: Staphylococcus epidermidis strain IRL01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFV05_RS06005 () | 1172766..1173824 | + | 1059 | WP_002456347.1 | PTS transporter subunit IIC | - |
| GFV05_RS06010 () | 1174062..1175519 | + | 1458 | WP_002440300.1 | ABC transporter substrate-binding protein/permease | - |
| GFV05_RS06015 () | 1175512..1176234 | + | 723 | WP_001829838.1 | amino acid ABC transporter ATP-binding protein | - |
| GFV05_RS06020 () | 1176749..1176886 | + | 138 | WP_064783702.1 | IS1182 family transposase IS1272 | Transposase |
| GFV05_RS06025 () | 1177096..1178226 | + | 1131 | WP_001829814.1 | tRNA epoxyqueuosine(34) reductase QueG | - |
| GFV05_RS06030 () | 1178223..1178693 | + | 471 | WP_001829836.1 | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | - |
| GFV05_RS06035 () | 1178851..1179450 | + | 600 | WP_002456349.1 | glucosamine-6-phosphate isomerase | Antitoxin Detail |
| GFV05_RS06040 () | 1179474..1179653 | + | 180 | WP_002468490.1 | hypothetical protein | Toxin Detail |
| GFV05_RS06045 () | 1179809..1180213 | + | 405 | WP_001829818.1 | hypothetical protein | - |
| GFV05_RS06050 () | 1180398..1181783 | + | 1386 | WP_001829862.1 | class II fumarate hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus epidermidis isolate BPH0662 | IS/Tn | TA293162 | NZ_LT571449 | 1606882..1607037 | 0 |