MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 96518 bp
Accession: NZ_CP045624 Location: 1..96518 Organism: Roseibium aggregatum strain SDL044 Replicon: plasmid unnamed2
Accession: NZ_CP045624 Location: 1..96518 Organism: Roseibium aggregatum strain SDL044 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFK90_RS28980 (GFK90_28815) | 129..422 | - | 294 | WP_228866822.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GFK90_RS28985 (GFK90_28820) | 419..667 | - | 249 | WP_228866823.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| GFK90_RS28990 | 914..1078 | - | 165 | WP_228866872.1 | hypothetical protein | - |
| GFK90_RS28995 (GFK90_28825) | 1442..1702 | + | 261 | WP_228866824.1 | WGR domain-containing protein | - |
| GFK90_RS29000 (GFK90_28830) | 1790..2107 | - | 318 | WP_075282947.1 | DUF736 domain-containing protein | - |
| GFK90_RS29005 (GFK90_28835) | 2831..3760 | - | 930 | WP_228866825.1 | zincin-like metallopeptidase domain-containing protein | - |
| GFK90_RS29010 (GFK90_28840) | 4034..4219 | - | 186 | WP_228866826.1 | hypothetical protein | - |
| GFK90_RS29015 (GFK90_28845) | 4550..4945 | - | 396 | WP_168693816.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| GFK90_RS29020 (GFK90_28850) | 4938..5204 | - | 267 | WP_168693771.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| GFK90_RS29025 (GFK90_28855) | 5313..5900 | - | 588 | WP_228866827.1 | hypothetical protein | - |
| GFK90_RS29030 (GFK90_28860) | 6256..6606 | - | 351 | WP_228866828.1 | hypothetical protein | - |
| GFK90_RS29035 (GFK90_28865) | 6603..7478 | - | 876 | WP_228866829.1 | hypothetical protein | - |
| GFK90_RS29040 (GFK90_28870) | 7475..7945 | - | 471 | WP_228866830.1 | hypothetical protein | - |
| GFK90_RS29045 (GFK90_28875) | 8036..9721 | - | 1686 | WP_228866831.1 | ParB/RepB/Spo0J family partition protein | - |
| GFK90_RS29050 (GFK90_28880) | 10086..11462 | + | 1377 | WP_228866832.1 | endonuclease/exonuclease/phosphatase family protein | - |
| GFK90_RS29055 (GFK90_28885) | 11481..16589 | - | 5109 | WP_228866833.1 | N-6 DNA methylase | - |
| GFK90_RS29060 (GFK90_28890) | 16676..17074 | - | 399 | WP_228866834.1 | DUF3085 domain-containing protein | - |
| GFK90_RS29065 (GFK90_28895) | 17083..17679 | - | 597 | WP_228866835.1 | DUF1419 domain-containing protein | - |
| GFK90_RS29070 (GFK90_28900) | 17890..18783 | - | 894 | WP_228866836.1 | DUF3991 and toprim domain-containing protein | - |
| GFK90_RS29075 | 19123..19290 | - | 168 | WP_228866837.1 | hypothetical protein | - |
| GFK90_RS29080 (GFK90_28905) | 19343..19897 | + | 555 | Protein_21 | transposase | - |
| GFK90_RS29085 | 19924..20158 | + | 235 | Protein_22 | DDE-type integrase/transposase/recombinase | - |
| GFK90_RS29090 (GFK90_28915) | 20261..21658 | + | 1398 | WP_228866838.1 | hypothetical protein | - |
| GFK90_RS29095 (GFK90_28920) | 21744..21884 | + | 141 | Protein_24 | IS6 family transposase | - |
| GFK90_RS29100 (GFK90_28925) | 22416..23336 | + | 921 | WP_228866839.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein | - |
| GFK90_RS29105 (GFK90_28930) | 23346..24353 | + | 1008 | WP_228866840.1 | Fe(3+) dicitrate transport system permease protein FecC | VF |
| GFK90_RS29110 (GFK90_28935) | 24350..25396 | + | 1047 | WP_228866841.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| GFK90_RS29115 (GFK90_28940) | 25402..26208 | + | 807 | WP_228866842.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| GFK90_RS29120 (GFK90_28945) | 26504..26920 | - | 417 | WP_228866843.1 | IS607 family transposase IS607 | Transposase |
| GFK90_RS29125 (GFK90_28950) | 26996..27382 | + | 387 | WP_228866844.1 | mercuric transporter MerT family protein | - |
| GFK90_RS29130 (GFK90_28955) | 27396..27707 | + | 312 | WP_228866845.1 | hypothetical protein | - |
| GFK90_RS29135 (GFK90_28960) | 27732..27992 | + | 261 | WP_228866846.1 | mercury resistance system transport protein MerF | - |
| GFK90_RS29140 (GFK90_28965) | 27985..29409 | + | 1425 | WP_228866847.1 | mercury(II) reductase | - |
| GFK90_RS29145 (GFK90_28970) | 29480..30148 | + | 669 | WP_228866848.1 | cytochrome c biogenesis protein CcdA | - |
| GFK90_RS29150 (GFK90_28975) | 30170..30619 | + | 450 | WP_228866849.1 | hypothetical protein | - |
| GFK90_RS29155 (GFK90_28980) | 30755..32236 | + | 1482 | WP_228866850.1 | multicopper oxidase family protein | - |
| GFK90_RS29160 (GFK90_28985) | 32233..32949 | + | 717 | WP_228866851.1 | c-type cytochrome | - |
| GFK90_RS29165 (GFK90_28990) | 33168..33896 | + | 729 | WP_228866852.1 | hypothetical protein | - |
| GFK90_RS29170 (GFK90_28995) | 33908..34393 | + | 486 | WP_228866853.1 | DUF411 domain-containing protein | - |
| GFK90_RS30100 | 34398..34529 | + | 132 | WP_267479139.1 | hypothetical protein | - |
| GFK90_RS29175 (GFK90_29000) | 34526..34999 | + | 474 | WP_228866854.1 | cytochrome c | - |
| GFK90_RS29180 (GFK90_29005) | 34996..35601 | + | 606 | WP_228866855.1 | DsbE family thiol:disulfide interchange protein | - |
| GFK90_RS29185 (GFK90_29010) | 35598..36206 | + | 609 | WP_228866856.1 | TlpA disulfide reductase family protein | - |
| GFK90_RS29190 (GFK90_29015) | 36220..36645 | + | 426 | WP_228866857.1 | hypothetical protein | - |
| GFK90_RS29195 (GFK90_29020) | 36638..36877 | + | 240 | WP_228866858.1 | hypothetical protein | - |
| GFK90_RS29200 (GFK90_29025) | 36923..37564 | + | 642 | WP_228866859.1 | SCO family protein | - |
| GFK90_RS29205 (GFK90_29030) | 37564..38013 | + | 450 | WP_228866860.1 | copper chaperone PCu(A)C | - |
| GFK90_RS29210 (GFK90_29035) | 38010..38636 | + | 627 | WP_228866861.1 | hypothetical protein | - |
| GFK90_RS29215 (GFK90_29040) | 38654..39487 | + | 834 | WP_228866862.1 | DsbA family protein | - |
| GFK90_RS29220 (GFK90_29045) | 39487..40227 | + | 741 | WP_228866863.1 | cytochrome c biogenesis protein CcdA | - |
| GFK90_RS29225 | 40761..41003 | - | 243 | Protein_51 | transposase | - |
| GFK90_RS29230 (GFK90_29055) | 41147..42439 | - | 1293 | WP_228866864.1 | flagellar biosynthesis protein FlgA | - |
| GFK90_RS29235 (GFK90_29060) | 42466..43278 | - | 813 | WP_228866865.1 | class II aldolase/adducin family protein | - |
| GFK90_RS29240 (GFK90_29065) | 43376..44296 | + | 921 | WP_228866866.1 | HTH-type transcriptional regulator DmlR | VF |
| GFK90_RS29245 (GFK90_29070) | 44426..45820 | - | 1395 | WP_228866867.1 | Fic family protein | - |
| GFK90_RS29250 (GFK90_29075) | 46080..47351 | + | 1272 | WP_228866869.1 | DNA repair exonuclease | - |
| GFK90_RS29255 (GFK90_29080) | 47351..49366 | + | 2016 | WP_228866868.1 | YhaN family protein | - |
| GFK90_RS29260 (GFK90_29085) | 49363..50154 | - | 792 | WP_008335465.1 | TniQ family protein | - |
| GFK90_RS29265 | 50151..50399 | - | 249 | WP_228866798.1 | hypothetical protein | - |
| GFK90_RS29270 (GFK90_29090) | 50396..51031 | - | 636 | WP_228866799.1 | TniB family NTP-binding protein | - |
| GFK90_RS29275 (GFK90_29095) | 51033..52667 | - | 1635 | WP_024099411.1 | IS481 family transposase ISChy6 | Transposase |
| GFK90_RS29280 (GFK90_29100) | 52840..52977 | + | 138 | Protein_62 | IS110 family transposase | - |
| GFK90_RS29285 (GFK90_29105) | 53290..54221 | + | 932 | Protein_63 | IS5 family transposase ISPko1 | Transposase |
| GFK90_RS29290 (GFK90_29110) | 54371..55810 | + | 1440 | WP_024099412.1 | hypothetical protein | - |
| GFK90_RS29295 (GFK90_29115) | 56157..56681 | - | 525 | Protein_65 | IS110 family transposase ISAzs4 | Transposase |
| GFK90_RS29300 (GFK90_29120) | 56741..57496 | - | 756 | WP_228866800.1 | TniQ family protein | - |
| GFK90_RS29305 (GFK90_29125) | 57529..58407 | - | 879 | WP_007803215.1 | TniB family NTP-binding protein | - |
| GFK90_RS29310 (GFK90_29130) | 58498..59430 | - | 933 | WP_007803217.1 | IS5 family transposase ISRhba5 | Transposase |
| GFK90_RS29315 (GFK90_29135) | 59682..60524 | + | 843 | WP_007803218.1 | hypothetical protein | - |
| GFK90_RS29320 (GFK90_29140) | 60583..61152 | - | 570 | WP_007803220.1 | PIN domain-containing protein | Toxin Detail |
| GFK90_RS29325 (GFK90_29145) | 61149..61613 | - | 465 | WP_007803221.1 | excisionase family DNA-binding protein | Antitoxin Detail |
| GFK90_RS29330 (GFK90_29150) | 61763..62683 | - | 921 | WP_228866870.1 | helix-turn-helix domain-containing protein | - |
| GFK90_RS29335 (GFK90_29155) | 62844..64478 | + | 1635 | WP_228866801.1 | Mu transposase C-terminal domain-containing protein | - |
| GFK90_RS29340 (GFK90_29160) | 64480..65361 | + | 882 | WP_228866802.1 | TniB family NTP-binding protein | - |
| GFK90_RS29345 (GFK90_29165) | 65358..66392 | + | 1035 | WP_228866803.1 | TniQ family protein | - |
| GFK90_RS29350 (GFK90_29170) | 66376..66855 | - | 480 | WP_228866804.1 | SMC-Scp complex subunit ScpB | - |
| GFK90_RS29355 (GFK90_29175) | 67131..67922 | - | 792 | WP_024099409.1 | TniQ family protein | - |
| GFK90_RS29360 (GFK90_29180) | 67919..68503 | - | 585 | WP_267479140.1 | TniB family NTP-binding protein | - |
| GFK90_RS30105 | 68461..68694 | - | 234 | WP_267479138.1 | TniB family NTP-binding protein | - |
| GFK90_RS29365 (GFK90_29185) | 68800..70290 | - | 1491 | WP_228866805.1 | IS481 family transposase ISChy6 | Transposase |
| GFK90_RS29370 (GFK90_29190) | 70562..72217 | - | 1656 | WP_228866806.1 | AAA family ATPase | - |
| GFK90_RS29375 (GFK90_29195) | 72500..73606 | - | 1107 | WP_228866807.1 | RHE_PE00001 family protein | - |
| GFK90_RS29380 (GFK90_29200) | 73889..74830 | + | 942 | WP_228866871.1 | Tn3 family transposase ISPsy42 | Transposase |
| GFK90_RS29385 (GFK90_29210) | 75179..76492 | - | 1314 | WP_228866808.1 | plasmid replication protein RepC | - |
| GFK90_RS29390 (GFK90_29215) | 76684..77679 | - | 996 | WP_228866809.1 | plasmid partitioning protein RepB | - |
| GFK90_RS29395 (GFK90_29220) | 77758..78954 | - | 1197 | WP_228866810.1 | Sporulation initiation inhibitor protein Soj | VF |
| GFK90_RS29400 (GFK90_29225) | 79710..80714 | + | 1005 | WP_228866811.1 | Type IV secretion system protein PtlH | VF |
| GFK90_RS29405 (GFK90_29230) | 80704..81063 | + | 360 | WP_228866812.1 | TrbC/VirB2 family protein | - |
| GFK90_RS29410 (GFK90_29235) | 81056..81352 | + | 297 | WP_228866813.1 | conjugal transfer protein TrbD | - |
| GFK90_RS29415 (GFK90_29240) | 81355..83802 | + | 2448 | WP_228866814.1 | conjugal transfer protein TrbE | - |
| GFK90_RS29420 (GFK90_29245) | 83780..84571 | + | 792 | WP_228866815.1 | P-type conjugative transfer protein TrbJ | - |
| GFK90_RS29425 (GFK90_29250) | 84574..84780 | + | 207 | WP_228866816.1 | hypothetical protein | - |
| GFK90_RS29430 (GFK90_29255) | 84780..85937 | + | 1158 | WP_228866817.1 | P-type conjugative transfer protein TrbL | - |
| GFK90_RS29435 (GFK90_29260) | 85953..86615 | + | 663 | WP_228866818.1 | conjugal transfer protein TrbF | - |
| GFK90_RS29440 (GFK90_29265) | 86681..87478 | + | 798 | WP_228866819.1 | P-type conjugative transfer protein TrbG | - |
| GFK90_RS29445 (GFK90_29270) | 87481..87948 | + | 468 | WP_228866820.1 | conjugal transfer protein TrbH | - |
| GFK90_RS29450 (GFK90_29275) | 87961..89302 | + | 1342 | Protein_97 | IncP-type conjugal transfer protein TrbI | - |
| GFK90_RS29455 | 89489..89755 | - | 267 | Protein_98 | integrase core domain-containing protein | - |
| GFK90_RS29460 (GFK90_29290) | 89697..91009 | - | 1313 | Protein_99 | ISNCY family transposase ISRel26 | Transposase |
| GFK90_RS29465 (GFK90_29295) | 91295..91768 | - | 474 | WP_168693799.1 | signal peptidase II | - |
| GFK90_RS29470 (GFK90_29300) | 91791..92246 | - | 456 | WP_168693798.1 | DUF411 domain-containing protein | - |
| GFK90_RS29475 (GFK90_29305) | 92430..93056 | - | 627 | WP_168693797.1 | SCO family protein | - |
| GFK90_RS29480 (GFK90_29310) | 93056..93520 | - | 465 | WP_168693796.1 | copper chaperone PCu(A)C | - |
| GFK90_RS29485 (GFK90_29315) | 93548..94207 | - | 660 | WP_168693795.1 | thioredoxin domain-containing protein | - |
| GFK90_RS29490 (GFK90_29320) | 94204..94626 | - | 423 | WP_168693794.1 | disulfide bond formation protein B | - |
| GFK90_RS29495 (GFK90_29325) | 94631..94870 | - | 240 | WP_168693793.1 | hypothetical protein | - |
| GFK90_RS29500 (GFK90_29330) | 95113..95541 | + | 429 | WP_168693792.1 | IS607 family transposase ISChh1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|