MGE detailed information
MGE type: Prophage MGE length: 27612 bp
Accession: NZ_CP045522 Location: 2230689..2258300 Organism: Shigella flexneri strain 5908.2 Replicon: chromosome
Accession: NZ_CP045522 Location: 2230689..2258300 Organism: Shigella flexneri strain 5908.2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE167_RS11135 () | 2225797..2226558 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| GE167_RS11140 () | 2226632..2226829 | - | 198 | WP_000543382.1 | two-component system connector SafA | - |
| GE167_RS11145 () | 2227077..2229356 | - | 2280 | WP_000726665.1 | acid resistance putative oxidoreductase YdeP | - |
| GE167_RS11150 () | 2229690..2230439 | - | 750 | Protein_2203 | fimbrial protein | - |
| GE167_RS24265 () | 2230495..2231046 | + | 552 | Protein_2204 | IS1 family transposase IS1X1 | Transposase |
| GE167_RS11155 () | 2231038..2232247 | + | 1210 | Protein_2205 | IS3 family transposase IS629 | Transposase |
| GE167_RS11160 () | 2232312..2232521 | + | 210 | Protein_2206 | IS1 family transposase IS1X2 | Transposase |
| GE167_RS11165 () | 2232596..2232961 | - | 366 | Protein_2207 | Protein FimG | VF |
| GE167_RS23840 () | 2232974..2233332 | - | 359 | Protein_2208 | type 1 fimbrial protein | - |
| GE167_RS11180 () | 2233443..2234611 | + | 1169 | WP_000747032.1 | IS3 family transposase ISLad1 | Transposase |
| GE167_RS11190 () | 2234648..2235804 | + | 1157 | WP_173020732.1 | IS3 family transposase IS600 | Transposase |
| GE167_RS11195 () | 2235801..2236106 | - | 306 | WP_071818640.1 | hypothetical protein | - |
| GE167_RS11200 () | 2236131..2236370 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| GE167_RS11205 () | 2236370..2236657 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| GE167_RS11210 () | 2236729..2236884 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| GE167_RS11215 () | 2237102..2237352 | + | 251 | Protein_2215 | hypothetical protein | - |
| GE167_RS11220 () | 2237419..2237697 | + | 279 | WP_024258459.1 | hypothetical protein | - |
| GE167_RS11225 () | 2237699..2238748 | + | 1050 | WP_025759563.1 | DUF968 domain-containing protein | - |
| GE167_RS11230 () | 2238761..2239117 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GE167_RS11235 () | 2239132..2239953 | + | 822 | WP_000762884.1 | antitermination protein | - |
| GE167_RS11250 () | 2240895..2240981 | + | 87 | WP_000115835.1 | DUF3927 family protein | - |
| GE167_RS11255 () | 2241262..2241597 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| GE167_RS11260 () | 2241857..2242042 | + | 186 | Protein_2222 | DUF1737 domain-containing protein | - |
| GE167_RS11265 () | 2242042..2242203 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| GE167_RS11270 () | 2242353..2242532 | + | 180 | WP_000372593.1 | class II holin family protein | - |
| GE167_RS11285 () | 2243817..2244227 | + | 411 | Protein_2226 | YdaU family protein | - |
| GE167_RS24270 () | 2245993..2246162 | + | 170 | Protein_2228 | hypothetical protein | - |
| GE167_RS11300 () | 2246308..2247054 | + | 747 | WP_000788996.1 | ATP-binding protein | - |
| GE167_RS11305 () | 2247069..2247491 | + | 423 | WP_001118171.1 | DUF977 family protein | - |
| GE167_RS11310 () | 2247549..2247905 | + | 357 | WP_000403784.1 | hypothetical protein | - |
| GE167_RS11315 () | 2247998..2248216 | + | 219 | WP_000256997.1 | DUF4014 family protein | - |
| GE167_RS11320 () | 2248218..2248580 | + | 363 | Protein_2233 | HNH endonuclease | - |
| GE167_RS24275 () | 2248580..2249245 | + | 666 | WP_005115317.1 | hypothetical protein | - |
| GE167_RS11330 () | 2249245..2249610 | + | 366 | WP_000610655.1 | DUF551 domain-containing protein | - |
| - | 2249995..2250053 | - | 59 | - | - | Antitoxin Detail |
| GE167_RS11335 () | 2250065..2250220 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| GE167_RS11350 () | 2251557..2252156 | + | 600 | WP_000940329.1 | DUF1367 family protein | - |
| GE167_RS11355 () | 2252156..2252446 | + | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| GE167_RS11360 () | 2252443..2252997 | + | 555 | WP_000640143.1 | DUF1133 family protein | - |
| GE167_RS11365 () | 2253409..2254596 | - | 1188 | Protein_2241 | IS91 family transposase ISEc37 | Transposase |
| GE167_RS11370 () | 2254596..2254961 | - | 366 | WP_000124119.1 | hypothetical protein | - |
| GE167_RS11375 () | 2255046..2256548 | + | 1503 | Protein_2243 | kojibiose phosphorylase | - |
| GE167_RS11380 () | 2256545..2257204 | + | 660 | WP_000775779.1 | beta-phosphoglucomutase | - |
| GE167_RS11385 () | 2257218..2258300 | + | 1083 | WP_000057968.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| GE167_RS11390 () | 2258345..2259250 | + | 906 | WP_021577276.1 | monomeric porin OmpG | - |
| GE167_RS11395 () | 2259361..2260359 | - | 999 | WP_000075372.1 | LacI family DNA-binding transcriptional regulator | - |
| GE167_RS11400 () | 2260514..2261911 | + | 1398 | WP_000825773.1 | YcjX family protein | - |
| GE167_RS11405 () | 2261908..2262969 | + | 1062 | WP_000138744.1 | YcjF family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|