MGE detailed information
MGE type: Prophage MGE length: 68090 bp
Accession: NZ_CP045435 Location: 1610933..1679022 Organism: Staphylococcus aureus strain 08-028 Replicon: chromosome
Accession: NZ_CP045435 Location: 1610933..1679022 Organism: Staphylococcus aureus strain 08-028 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SA08028_RS07850 () | 1606682..1606930 | + | 249 | WP_001151997.1 | ferredoxin | - |
| SA08028_RS07855 () | 1607036..1607581 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| SA08028_RS07860 () | 1607991..1608905 | - | 915 | WP_000476340.1 | DUF1672 domain-containing protein | - |
| SA08028_RS07865 () | 1608962..1609879 | - | 918 | WP_000476881.1 | DUF1672 domain-containing protein | - |
| SA08028_RS07870 () | 1609937..1610842 | - | 906 | WP_000476866.1 | DUF1672 domain-containing protein | - |
| SA08028_RS07875 () | 1610933..1611118 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| SA08028_RS07880 () | 1611394..1611951 | - | 558 | WP_000528632.1 | hypothetical protein | - |
| SA08028_RS07885 () | 1612676..1614130 | - | 1455 | WP_020444681.1 | N-acetylmuramoyl-L-alanine amidase | - |
| SA08028_RS07890 () | 1614141..1614443 | - | 303 | WP_000339141.1 | phage holin | - |
| SA08028_RS07895 () | 1614579..1614878 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| SA08028_RS07900 () | 1614924..1615088 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| SA08028_RS07905 () | 1615081..1615470 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| SA08028_RS07910 () | 1615470..1616936 | - | 1467 | WP_020444680.1 | BppU family phage baseplate upper protein | - |
| SA08028_RS07915 () | 1616936..1618846 | - | 1911 | WP_000429552.1 | hypothetical protein | - |
| SA08028_RS07920 () | 1618862..1619152 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| SA08028_RS07925 () | 1619152..1620735 | - | 1584 | WP_000384462.1 | prophage endopeptidase tail family protein | - |
| SA08028_RS07930 () | 1620744..1621568 | - | 825 | WP_020444679.1 | phage tail family protein | - |
| SA08028_RS07935 () | 1621568..1627769 | - | 6202 | Protein_1562 | phage tail tape measure protein | - |
| SA08028_RS07940 () | 1627783..1627941 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| SA08028_RS07945 () | 1627992..1628333 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| SA08028_RS07950 () | 1628391..1628846 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| SA08028_RS07955 () | 1628938..1629579 | - | 642 | WP_000807536.1 | tail protein | - |
| SA08028_RS07960 () | 1629614..1630009 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| SA08028_RS07965 () | 1630010..1630411 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| SA08028_RS07970 () | 1630408..1630740 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| SA08028_RS07975 () | 1630752..1631030 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| SA08028_RS07980 () | 1631099..1632262 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| SA08028_RS07985 () | 1632274..1633047 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| SA08028_RS07990 () | 1633031..1634269 | - | 1239 | WP_001100665.1 | phage portal protein | - |
| SA08028_RS07995 () | 1634274..1635965 | - | 1692 | WP_050974185.1 | terminase large subunit | - |
| SA08028_RS08000 () | 1635955..1636260 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| SA08028_RS08005 () | 1636381..1636695 | - | 315 | WP_000160683.1 | HNH endonuclease | - |
| SA08028_RS08010 () | 1636852..1637289 | - | 438 | WP_000513703.1 | transcriptional regulator | - |
| SA08028_RS08015 () | 1637302..1638670 | - | 1369 | Protein_1578 | DEAD/DEAH box helicase | - |
| SA08028_RS08020 () | 1638651..1638941 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| SA08028_RS08025 () | 1639075..1639179 | + | 105 | WP_011447017.1 | hypothetical protein | - |
| SA08028_RS08030 () | 1639282..1641729 | - | 2448 | WP_020444670.1 | virulence-associated E family protein | - |
| SA08028_RS08035 () | 1641781..1641981 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| SA08028_RS08040 () | 1642049..1642201 | - | 153 | WP_000237866.1 | transcriptional activator RinB | - |
| SA08028_RS08045 () | 1642204..1642404 | - | 201 | WP_001125015.1 | hypothetical protein | - |
| SA08028_RS08050 () | 1642379..1642567 | - | 189 | WP_000195789.1 | DUF1381 domain-containing protein | - |
| SA08028_RS08055 () | 1642584..1642757 | - | 174 | WP_001209219.1 | hypothetical protein | - |
| SA08028_RS08060 () | 1642794..1643321 | - | 528 | WP_000181816.1 | dUTP pyrophosphatase | - |
| SA08028_RS08065 () | 1643314..1643556 | - | 243 | WP_000700108.1 | hypothetical protein | - |
| SA08028_RS08070 () | 1643546..1643782 | - | 237 | WP_000370296.1 | DUF1024 family protein | - |
| SA08028_RS08075 () | 1643775..1643942 | - | 168 | WP_001813803.1 | hypothetical protein | - |
| SA08028_RS08080 () | 1643954..1644202 | - | 249 | WP_000178883.1 | phi PVL orf 51-like protein | - |
| SA08028_RS08085 () | 1644211..1644411 | - | 201 | WP_075111654.1 | hypothetical protein | - |
| SA08028_RS08090 () | 1644414..1644671 | - | 258 | WP_000111488.1 | DUF3310 domain-containing protein | - |
| SA08028_RS08095 () | 1644671..1645073 | - | 403 | Protein_1594 | PVL family protein | - |
| SA08028_RS08100 () | 1645073..1645258 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| SA08028_RS08105 () | 1645271..1647223 | - | 1953 | Protein_1596 | DNA polymerase | - |
| SA08028_RS08110 () | 1647292..1647849 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| SA08028_RS08115 () | 1647875..1649041 | - | 1167 | WP_000762547.1 | DUF2800 domain-containing protein | - |
| SA08028_RS08120 () | 1649038..1649400 | - | 363 | WP_000985984.1 | hypothetical protein | - |
| SA08028_RS08125 () | 1649415..1649738 | - | 324 | WP_000175001.1 | hypothetical protein | - |
| SA08028_RS08130 () | 1649817..1649978 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| SA08028_RS08135 () | 1649991..1650253 | - | 263 | Protein_1602 | IS3 family transposase ISVa4 | Transposase |
| SA08028_RS08140 () | 1650278..1650493 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| SA08028_RS08145 () | 1650548..1650913 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| SA08028_RS08150 () | 1650882..1651127 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| SA08028_RS08155 () | 1651183..1651392 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| SA08028_RS08160 () | 1651382..1651525 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| SA08028_RS08165 () | 1651554..1652330 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| SA08028_RS08170 () | 1652344..1652580 | - | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| SA08028_RS08175 () | 1652732..1653046 | + | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | - |
| SA08028_RS08180 () | 1653059..1653520 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| SA08028_RS08185 () | 1653538..1654122 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| SA08028_RS08190 () | 1654352..1654498 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| SA08028_RS08195 () | 1654495..1655109 | - | 615 | Protein_1614 | ATPase | - |
| SA08028_RS08200 () | 1655235..1656440 | + | 1206 | WP_020444721.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| SA08028_RS08205 () | 1656483..1658509 | - | 2027 | Protein_1616 | hypothetical protein | - |
| SA08028_RS08210 () | 1658521..1659429 | - | 909 | WP_078375577.1 | DUF1672 domain-containing protein | - |
| SA08028_RS08215 () | 1659674..1661425 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| SA08028_RS08220 () | 1661406..1662131 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| SA08028_RS08225 () | 1662264..1663001 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| SA08028_RS08230 () | 1662994..1663536 | - | 543 | WP_000368657.1 | SMC-Scp complex subunit ScpB | - |
| SA08028_RS08235 () | 1663529..1664260 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| SA08028_RS08240 () | 1664352..1664858 | + | 507 | WP_001183427.1 | DUF309 domain-containing protein | - |
| SA08028_RS08245 () | 1664936..1665823 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| SA08028_RS08250 () | 1665872..1666321 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| SA08028_RS08255 () | 1666426..1666968 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| SA08028_RS08260 () | 1667050..1667959 | + | 910 | Protein_1627 | aldo/keto reductase | - |
| SA08028_RS08265 () | 1668175..1668423 | - | 249 | WP_000995799.1 | hypothetical protein | - |
| SA08028_RS08270 () | 1668439..1669194 | - | 756 | WP_000678234.1 | SDR family oxidoreductase | - |
| SA08028_RS08275 () | 1669336..1670151 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| SA08028_RS08280 () | 1670254..1671174 | - | 921 | WP_000454068.1 | ribonuclease Z | - |
| SA08028_RS08285 () | 1671487..1672971 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| SA08028_RS08290 () | 1673201..1674067 | + | 867 | WP_000382586.1 | AraC family transcriptional regulator | - |
| SA08028_RS08295 () | 1674149..1675797 | - | 1649 | Protein_1634 | alpha-glucosidase | - |
| SA08028_RS08300 () | 1675813..1676832 | - | 1020 | WP_000256340.1 | HTH-type transcriptional regulator MalR | VF |
| SA08028_RS08305 () | 1676833..1677087 | - | 255 | WP_001837949.1 | hypothetical protein | - |
| SA08028_RS08310 () | 1677026..1677397 | - | 372 | WP_000413427.1 | VOC family protein | - |
| SA08028_RS08315 () | 1677616..1679022 | - | 1407 | WP_000193707.1 | 6-phosphogluconate dehydrogenase, decarboxylating | VF |
| SA08028_RS08320 () | 1679090..1680223 | - | 1134 | WP_000606674.1 | tripeptidase T | - |
| SA08028_RS08325 () | 1680486..1680665 | + | 180 | WP_001789875.1 | stressosome-associated protein Prli42 | - |
| SA08028_RS08330 () | 1680792..1681772 | - | 981 | WP_000916195.1 | aromatic acid exporter family protein | - |
| SA08028_RS08335 () | 1681786..1682223 | - | 438 | WP_000367419.1 | BrxA/BrxB family bacilliredoxin | - |
| SA08028_RS08340 () | 1682574..1683848 | - | 1275 | WP_179976062.1 | 2-oxo acid dehydrogenase subunit E2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|