NZ_CP0454001..169237

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 169237 bp
Accession: NZ_CP045400        Location: 1..169237         Organism: Halomonas sp. THAF12       Replicon: plasmid pTHAF12_a


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FIU88_RS17725 () 2568..3602 - 1035 WP_152480273.1 plasmid replication protein -
FIU88_RS17730 () 3639..3998 - 360 WP_152480274.1 H-NS histone family protein -
FIU88_RS17735 () 4435..4737 - 303 WP_152480275.1 helix-turn-helix domain-containing protein Antitoxin Detail
FIU88_RS17740 () 4748..5092 - 345 WP_152480276.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
FIU88_RS17745 () 5315..5587 - 273 WP_152480277.1 hypothetical protein -
FIU88_RS17750 () 5584..6525 - 942 WP_152480278.1 integrase domain-containing protein -
FIU88_RS17755 () 8211..9143 + 933 WP_172977769.1 replication initiation protein -
FIU88_RS17760 () 9904..11298 + 1395 WP_172977770.1 Plasmid recombination enzyme Relaxase
FIU88_RS17765 () 11345..11620 + 276 WP_152480281.1 BrnT family toxin -
FIU88_RS17770 () 11598..11873 + 276 WP_152480282.1 BrnA antitoxin family protein -
FIU88_RS17775 () 12067..12711 + 645 WP_152480283.1 ParA family protein -
FIU88_RS17780 () 12745..12987 + 243 WP_152480284.1 hypothetical protein -
FIU88_RS17785 () 13097..13330 + 234 WP_152480285.1 hypothetical protein -
FIU88_RS17790 () 13403..13585 + 183 WP_152480286.1 hypothetical protein -
FIU88_RS19235 () 13582..13725 + 144 WP_172977771.1 hypothetical protein -
FIU88_RS17795 () 13725..14168 + 444 WP_152480287.1 AlpA family phage regulatory protein -
FIU88_RS17800 () 14262..14744 + 483 WP_152480288.1 hypothetical protein -
FIU88_RS17805 () 14905..15693 + 789 WP_152480289.1 hypothetical protein -
FIU88_RS17810 () 15807..16547 + 741 WP_152480290.1 hypothetical protein -
FIU88_RS17815 () 17015..18361 + 1347 WP_172977772.1 site-specific integrase -
FIU88_RS17820 () 18696..18926 + 231 WP_152480292.1 helix-turn-helix domain-containing protein -
FIU88_RS17825 () 18937..19311 + 375 WP_152480293.1 hypothetical protein -
FIU88_RS17830 () 19567..20922 + 1356 WP_152480294.1 helix-turn-helix domain-containing protein -
FIU88_RS17835 () 21080..21721 + 642 WP_152480295.1 helix-turn-helix domain-containing protein -
FIU88_RS17840 () 21932..22252 + 321 WP_152480296.1 hypothetical protein -
FIU88_RS17845 () 22245..22661 + 417 WP_152480297.1 hypothetical protein -
FIU88_RS17850 () 22661..23707 + 1047 WP_152480298.1 hypothetical protein -
FIU88_RS19240 () 23704..23865 + 162 WP_172977773.1 hypothetical protein -
FIU88_RS17855 () 23858..24214 + 357 WP_152480299.1 hypothetical protein -
FIU88_RS17860 () 24242..24862 + 621 WP_152480300.1 hypothetical protein -
FIU88_RS17865 () 24888..25118 + 231 WP_152480301.1 hypothetical protein -
FIU88_RS17870 () 25120..26010 + 891 WP_152480302.1 hypothetical protein -
FIU88_RS17875 () 26213..26437 + 225 WP_152480303.1 hypothetical protein -
FIU88_RS17880 () 26751..27224 + 474 WP_152480304.1 hypothetical protein -
FIU88_RS17885 () 27475..27753 + 279 WP_152480305.1 hypothetical protein -
FIU88_RS17890 () 27894..28214 + 321 WP_152480306.1 hypothetical protein -
FIU88_RS17895 () 28207..29166 + 960 WP_152480307.1 IS91 family transposase ISAzo26 Transposase
FIU88_RS17900 () 29181..29447 + 267 WP_152480308.1 hypothetical protein -
FIU88_RS17905 () 29510..29779 - 270 WP_074211810.1 helix-turn-helix domain-containing protein -
FIU88_RS17910 () 29785..30960 - 1176 WP_152480309.1 ParB/RepB/Spo0J family partition protein -
FIU88_RS17915 () 30962..31735 - 774 WP_152480416.1 ParA family protein -
FIU88_RS17920 () 31955..32890 - 936 WP_152480310.1 recombination-associated protein RdgC -
FIU88_RS17925 () 33331..33705 - 375 WP_152480311.1 hypothetical protein -
FIU88_RS17930 () 33702..34154 - 453 WP_152480312.1 hypothetical protein -
FIU88_RS17935 () 34151..34477 - 327 WP_152480313.1 hypothetical protein -
FIU88_RS17940 () 34603..35424 - 822 WP_152480314.1 thioredoxin fold domain-containing protein -
FIU88_RS17945 () 35520..36089 - 570 WP_152480315.1 hypothetical protein -
FIU88_RS17950 () 36155..36499 - 345 WP_172977774.1 single-stranded DNA-binding protein -
FIU88_RS17955 () 36647..37111 - 465 WP_152480317.1 hypothetical protein -
FIU88_RS17960 () 37299..38537 - 1239 WP_152480318.1 hypothetical protein -
FIU88_RS17965 () 38845..39240 - 396 WP_152480319.1 hypothetical protein -
FIU88_RS17970 () 39233..39586 - 354 WP_152480320.1 hypothetical protein -
FIU88_RS17975 () 39736..40575 + 840 WP_152480321.1 hypothetical protein -
FIU88_RS17980 () 40825..41103 - 279 WP_152480322.1 hypothetical protein -
FIU88_RS17985 () 41547..44693 - 3147 WP_152480323.1 HD domain-containing protein -
FIU88_RS17990 () 44690..45472 - 783 WP_152480324.1 M48 family metalloprotease -
FIU88_RS17995 () 45482..48094 - 2613 WP_152480325.1 TraC family protein -
FIU88_RS18000 () 48096..48593 - 498 WP_152480326.1 TraV family lipoprotein -
FIU88_RS18005 () 48598..50085 - 1488 WP_152480327.1 hypothetical protein -
FIU88_RS18010 () 50078..50770 - 693 WP_152480328.1 type-F conjugative transfer system secretin TraK -
FIU88_RS18015 () 50767..51324 - 558 WP_152480329.1 hypothetical protein -
FIU88_RS18020 () 51324..51617 - 294 WP_152480330.1 type IV conjugative transfer system protein TraL -
FIU88_RS18025 () 51634..51996 - 363 WP_152480331.1 TrbC/VirB2 family protein -
FIU88_RS18030 () 51993..52406 - 414 WP_022524272.1 hypothetical protein VF
FIU88_RS18035 () 52417..53202 - 786 WP_152480332.1 hypothetical protein -
FIU88_RS18040 () 53199..53843 - 645 WP_152480333.1 Outer membrane porin F VF
FIU88_RS18045 () 53843..54451 - 609 WP_152480334.1 hypothetical protein -
FIU88_RS18050 () 54448..54750 - 303 WP_152480335.1 hypothetical protein -
FIU88_RS18055 () 55224..56831 - 1608 WP_152480336.1 DUF4942 domain-containing protein -
FIU88_RS18060 () 56845..57684 - 840 WP_152480337.1 DUF4942 domain-containing protein -
FIU88_RS18065 () 57792..58097 + 306 WP_152480338.1 hypothetical protein -
FIU88_RS18070 () 58216..58443 - 228 WP_152480339.1 hypothetical protein -
FIU88_RS18075 () 58518..58883 - 366 WP_152480340.1 hypothetical protein -
FIU88_RS18080 () 58891..59373 - 483 WP_152480341.1 PH domain-containing protein -
FIU88_RS18085 () 59378..59695 - 318 WP_152480342.1 hypothetical protein -
FIU88_RS19245 () 59682..59900 - 219 WP_172977775.1 hypothetical protein -
FIU88_RS18090 () 60170..60679 + 510 WP_152480343.1 hypothetical protein -
FIU88_RS18095 () 60730..60963 + 234 WP_152480344.1 hypothetical protein -
FIU88_RS18100 () 61042..61506 - 465 WP_152480345.1 hypothetical protein -
FIU88_RS18105 () 61767..62126 + 360 WP_152480346.1 hypothetical protein -
FIU88_RS18110 () 62149..62331 + 183 WP_152480347.1 hypothetical protein -
FIU88_RS18115 () 62318..62689 + 372 WP_152480348.1 hypothetical protein -
FIU88_RS18120 () 62811..63005 + 195 WP_152480349.1 hypothetical protein -
FIU88_RS18125 () 63037..63750 + 714 WP_152480350.1 DUF2786 domain-containing protein -
FIU88_RS18130 () 63773..64090 + 318 WP_152480351.1 hypothetical protein -
FIU88_RS18135 () 64101..64640 + 540 WP_152480352.1 hypothetical protein -
FIU88_RS18140 () 64647..64946 + 300 WP_152480353.1 hypothetical protein -
FIU88_RS18145 () 64975..66252 - 1278 WP_152480354.1 Y-family DNA polymerase -
FIU88_RS18150 () 66252..66722 - 471 WP_152480355.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
FIU88_RS18155 () 66850..67062 + 213 WP_152480356.1 hypothetical protein -
FIU88_RS18160 () 67125..67589 - 465 WP_152480357.1 RES family NAD+ phosphorylase Toxin Detail
FIU88_RS18165 () 67586..68038 - 453 WP_152480358.1 DUF2384 domain-containing protein Antitoxin Detail
FIU88_RS18170 () 68348..68596 - 249 WP_152480359.1 helix-turn-helix domain-containing protein -
FIU88_RS18175 () 68684..68965 - 282 WP_152480360.1 hypothetical protein -
FIU88_RS18180 () 69207..69434 + 228 WP_152480361.1 hypothetical protein -
FIU88_RS18185 () 69476..69712 + 237 WP_152480362.1 hypothetical protein -
FIU88_RS18190 () 69766..71409 + 1644 WP_152480363.1 phosphoadenosine phosphosulfate reductase family protein -
FIU88_RS18195 () 71537..72031 - 495 WP_152480364.1 hypothetical protein -
FIU88_RS18200 () 72238..72813 - 576 WP_152480365.1 hypothetical protein -
FIU88_RS18205 () 72814..73326 - 513 WP_152480366.1 hypothetical protein -
FIU88_RS18210 () 73380..74657 - 1278 WP_172977776.1 hypothetical protein -
FIU88_RS19250 () 74722..75030 - 309 WP_172977777.1 hypothetical protein -
FIU88_RS18215 () 75071..75562 - 492 WP_152480368.1 hypothetical protein -
FIU88_RS18220 () 75559..75963 - 405 WP_152480369.1 hypothetical protein -
FIU88_RS18225 () 75941..76234 - 294 WP_152480370.1 hypothetical protein -
FIU88_RS18230 () 76244..77260 - 1017 WP_152480371.1 hypothetical protein -
FIU88_RS18235 () 77337..77615 - 279 WP_152480372.1 hypothetical protein -
FIU88_RS18240 () 77612..78085 - 474 WP_152480373.1 hypothetical protein -
FIU88_RS18245 () 78596..80761 - 2166 WP_152480374.1 ATP-dependent RecD-like DNA helicase -
FIU88_RS18250 () 81222..83579 + 2358 WP_152480375.1 hypothetical protein -
FIU88_RS18255 () 83765..84301 + 537 WP_152480376.1 hypothetical protein -
FIU88_RS18260 () 85605..86222 - 618 WP_152480377.1 helix-turn-helix domain-containing protein -
FIU88_RS18265 () 86362..86715 + 354 WP_172977778.1 DUF2274 domain-containing protein -
FIU88_RS18270 () 86712..87254 - 543 WP_152480379.1 hypothetical protein -
FIU88_RS18275 () 87253..87828 + 576 WP_152480380.1 hypothetical protein -
FIU88_RS18280 () 87806..88492 + 687 WP_152480381.1 hypothetical protein -
FIU88_RS18285 () 88489..89496 + 1008 WP_152480382.1 TraU family protein -
FIU88_RS18290 () 89697..90455 + 759 WP_172977779.1 type-F conjugative transfer system pilin assembly protein TrbC -
FIU88_RS18295 () 90457..91779 + 1323 WP_152480384.1 hypothetical protein -
FIU88_RS18300 () 91779..94004 + 2226 WP_152480385.1 conjugal transfer protein TraN -
FIU88_RS18305 () 93992..94582 + 591 WP_152480386.1 hypothetical protein -
FIU88_RS18310 () 94579..94995 + 417 WP_152480387.1 hypothetical protein -
FIU88_RS18315 () 94992..96662 + 1671 WP_152480388.1 type IV secretion system DNA-binding domain-containing protein -
FIU88_RS18320 () 97003..97347 + 345 WP_152480389.1 hypothetical protein -
FIU88_RS18325 () 97379..100807 - 3429 WP_172977780.1 conjugal transfer protein TraG N-terminal domain-containing protein -
FIU88_RS18330 () 100861..102423 - 1563 WP_152480391.1 conjugal transfer protein TraH -
FIU88_RS18335 () 102423..103439 - 1017 WP_172977781.1 conjugal transfer protein TraF -
FIU88_RS18340 () 103436..103891 - 456 WP_172977782.1 metal-dependent hydrolase -
FIU88_RS18345 () 103964..104617 - 654 WP_172977783.1 ERF family protein -
FIU88_RS18350 () 105115..106209 - 1095 WP_152480394.1 toprim domain-containing protein -
FIU88_RS18355 () 106399..107766 - 1368 WP_152480395.1 DNA cytosine methyltransferase -
FIU88_RS18360 () 107880..108500 - 621 WP_152480396.1 hypothetical protein -
FIU88_RS18365 () 108582..108953 - 372 WP_152480397.1 hypothetical protein -
FIU88_RS18370 () 109089..109448 - 360 WP_152480398.1 hypothetical protein -
FIU88_RS18375 () 109605..110018 - 414 WP_152480399.1 hypothetical protein -
FIU88_RS18380 () 110015..110362 - 348 WP_152480400.1 hypothetical protein -
FIU88_RS18385 () 110822..111487 - 666 WP_152480401.1 SOS response-associated peptidase -
FIU88_RS18390 () 111505..111783 - 279 WP_152480402.1 hypothetical protein -
FIU88_RS18395 () 111929..112822 - 894 WP_152480403.1 hypothetical protein -
FIU88_RS18400 () 112890..113402 - 513 WP_172977784.1 DUF192 domain-containing protein -
FIU88_RS18405 () 113494..114366 + 873 WP_152480405.1 hypothetical protein -
FIU88_RS18410 () 114408..114743 - 336 WP_152480406.1 hypothetical protein -
FIU88_RS18415 () 114884..115189 + 306 WP_152480407.1 hypothetical protein -
FIU88_RS18420 () 115254..115508 - 255 WP_152480408.1 hypothetical protein -
FIU88_RS18425 () 115568..116248 - 681 WP_152480409.1 hypothetical protein -
FIU88_RS18430 () 116381..116875 - 495 WP_152480410.1 hypothetical protein -
FIU88_RS18435 () 117036..117356 - 321 WP_152480411.1 hypothetical protein -
FIU88_RS18440 () 117419..118513 - 1095 WP_152480412.1 endonuclease -
FIU88_RS18445 () 118527..119561 - 1035 WP_172977785.1 DNA-binding protein -
FIU88_RS18450 () 119689..120597 - 909 WP_152480414.1 DUF1738 domain-containing protein -
FIU88_RS18455 () 120738..121289 + 552 WP_152480415.1 DNA repair protein RadC -
FIU88_RS18460 () 121452..122780 + 1329 WP_152478282.1 site-specific integrase -
FIU88_RS18465 () 122788..125523 + 2736 WP_152480119.1 tyrosine-type recombinase/integrase -
FIU88_RS18470 () 125525..126127 + 603 WP_152478283.1 hypothetical protein -
FIU88_RS18475 () 126135..126608 + 474 WP_152478284.1 transcription elongation factor GreB -
FIU88_RS18480 () 126757..127040 - 284 Protein_155 transposase -
FIU88_RS18485 () 127057..128136 - 1080 WP_152478285.1 IS110 family transposase ISEc21 Transposase
FIU88_RS18490 () 128431..129290 - 860 Protein_157 IS3 family transposase -
FIU88_RS18495 () 129359..129886 + 528 WP_152478286.1 hypothetical protein -
FIU88_RS18500 () 129887..130876 - 990 WP_152478287.1 IS481 family transposase ISPca3 Transposase
FIU88_RS18505 () 130998..133316 - 2319 WP_152478288.1 heavy metal translocating P-type ATPase -
FIU88_RS18510 () 133313..134677 - 1365 WP_152478289.1 APC family permease -
FIU88_RS18515 () 134789..135274 - 486 WP_152478290.1 hypothetical protein -
FIU88_RS18520 () 135311..135649 - 339 WP_152478291.1 cation transporter -
FIU88_RS18525 () 135680..135883 - 204 WP_152478292.1 DUF2933 domain-containing protein -
FIU88_RS18530 () 135929..136750 - 822 WP_152478293.1 prolipoprotein diacylglyceryl transferase -
FIU88_RS18535 () 136946..137716 - 771 WP_172977656.1 copper resistance protein B -
FIU88_RS18540 () 137726..139513 - 1788 WP_152478294.1 copper resistance system multicopper oxidase -
FIU88_RS18545 () 139585..140916 - 1332 WP_152478295.1 sensor histidine kinase -
FIU88_RS18550 () 140897..141562 - 666 WP_152478296.1 Transcriptional regulatory protein PhoP VF
FIU88_RS18555 () 141571..142071 - 501 WP_152478297.1 cupredoxin domain-containing protein -
FIU88_RS18560 () 142280..142582 + 303 WP_152478298.1 hypothetical protein -
FIU88_RS19255 () 142656..142808 + 153 WP_172977657.1 hypothetical protein -
FIU88_RS18565 () 142805..143245 + 441 WP_152478299.1 hypothetical protein -
FIU88_RS18570 () 143626..144436 - 811 Protein_174 ISL3 family transposase -
FIU88_RS18575 () 144565..144702 - 138 Protein_175 signal peptidase II -
FIU88_RS18580 () 144803..146056 + 1254 WP_152478300.1 IS256 family transposase ISTdr1 Transposase
FIU88_RS18585 () 146086..146478 - 393 Protein_177 signal peptidase II -
FIU88_RS18590 () 146532..147791 - 1260 Protein_178 apolipoprotein N-acyltransferase -
FIU88_RS18595 () 147821..149074 - 1254 WP_152478300.1 IS256 family transposase ISTdr1 Transposase
FIU88_RS18600 () 149178..149363 - 186 Protein_180 apolipoprotein N-acyltransferase -
FIU88_RS18605 () 149656..150414 - 759 WP_152480121.1 peptidoglycan-binding protein -
FIU88_RS18610 () 150528..151424 - 897 WP_152478301.1 cation diffusion facilitator family transporter -
FIU88_RS18615 () 151523..151957 + 435 WP_152478302.1 Cd(II)/Pb(II)-responsive transcriptional regulator -
FIU88_RS18620 () 152115..152813 - 699 WP_152480122.1 cytochrome c biogenesis protein CcdA -
FIU88_RS18625 () 153059..153691 + 633 WP_152478303.1 peroxiredoxin -
FIU88_RS18630 () 153846..155147 - 1302 WP_008957405.1 ISL3 family transposase ISPst9 Transposase
FIU88_RS18635 () 155226..155672 - 447 WP_006911920.1 IS607 family transposase ISCfe1 Transposase
FIU88_RS18640 () 155746..156096 + 351 WP_008957404.1 mercuric ion transporter MerT -
FIU88_RS18645 () 156110..156406 + 297 WP_006911918.1 mercury resistance system periplasmic binding protein MerP -
FIU88_RS18650 () 156409..156666 + 258 WP_008957403.1 mercury resistance system transport protein MerF -
FIU88_RS18655 () 156740..156985 + 246 WP_008957402.1 mercury resistance system transport protein MerF -
FIU88_RS18660 () 156978..158627 + 1650 WP_008957401.1 mercury(II) reductase -
FIU88_RS18665 () 159033..161096 + 2064 WP_152478304.1 Diguanylate cyclase DgcM VF
FIU88_RS18670 () 161144..161466 - 323 Protein_194 type II toxin-antitoxin system PemK/MazF family toxin -
FIU88_RS18675 () 161463..161696 - 234 WP_152478305.1 antitoxin MazE family protein -
FIU88_RS18680 () 161876..162463 + 588 WP_152478306.1 Tn3 family transposase ISPsy42 Transposase
FIU88_RS18685 () 162665..164647 - 1983 WP_152478307.1 diguanylate cyclase -
FIU88_RS18690 () 164935..167490 + 2556 WP_152480123.1 putative signaling protein VF
FIU88_RS18695 () 167897..169150 + 1254 WP_152478308.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance