MGE detailed information
MGE type: Conjugative plasmid MGE length: 82182 bp
Accession: NZ_CP045279 Location: 1..82182 Organism: Escherichia coli strain LAU-OXA Replicon: plasmid pLAU-OXA2
Accession: NZ_CP045279 Location: 1..82182 Organism: Escherichia coli strain LAU-OXA Replicon: plasmid pLAU-OXA2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBF15_RS24135 () | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| GBF15_RS24140 () | 1263..2003 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| GBF15_RS24145 () | 2124..2303 | - | 180 | WP_042347974.1 | hypothetical protein | - |
| GBF15_RS24150 () | 2670..3839 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| GBF15_RS24155 () | 4065..4240 | - | 176 | Protein_4 | IS3 family transposase | - |
| GBF15_RS24160 () | 4686..4958 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| GBF15_RS24165 () | 5483..5919 | - | 437 | Protein_6 | IS3 family transposase IS2 | Transposase |
| GBF15_RS24170 () | 6201..8171 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| GBF15_RS24175 () | 8178..8969 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| GBF15_RS24180 () | 9032..9640 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| GBF15_RS24185 () | 9708..10487 | - | 780 | WP_001323403.1 | IS21 family transposase IS100kyp | Transposase |
| GBF15_RS24190 () | 10487..11509 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| GBF15_RS24195 () | 11595..11858 | - | 264 | Protein_12 | IS66 family transposase ISCfr14 | Transposase |
| GBF15_RS24200 () | 11923..12627 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GBF15_RS24205 () | 12693..13238 | + | 546 | Protein_14 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GBF15_RS24210 () | 13274..13689 | - | 416 | Protein_15 | IS1 family transposase IS1A | Transposase |
| GBF15_RS24215 () | 13938..14339 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| GBF15_RS24220 () | 14272..14529 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| GBF15_RS24225 () | 14622..15275 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| GBF15_RS24235 () | 16215..17072 | - | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| GBF15_RS24240 () | 17065..17139 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| GBF15_RS25605 () | 17136..17270 | - | 135 | Protein_21 | protein CopA/IncA | - |
| GBF15_RS24245 () | 17376..17630 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| GBF15_RS24250 () | 17927..18061 | - | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 18106..18166 | + | 61 | NuclAT_1 | - | Antitoxin Detail |
| - () | 18106..18166 | + | 61 | NuclAT_1 | - | Antitoxin Detail |
| - () | 18106..18166 | + | 61 | NuclAT_1 | - | Antitoxin Detail |
| - () | 18106..18166 | + | 61 | NuclAT_1 | - | Antitoxin Detail |
| GBF15_RS24255 () | 18133..18419 | - | 287 | Protein_24 | DUF2726 domain-containing protein | - |
| GBF15_RS24265 () | 18932..19144 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| GBF15_RS24270 () | 19275..19835 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| GBF15_RS24275 () | 19890..20636 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| GBF15_RS24280 () | 20656..25926 | - | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| GBF15_RS24285 () | 25926..28151 | - | 2226 | WP_047605472.1 | type IV conjugative transfer system coupling protein TraD | - |
| GBF15_RS24290 () | 28148..28927 | - | 780 | WP_000199914.1 | hypothetical protein | - |
| GBF15_RS24295 () | 29130..29861 | - | 732 | WP_000850429.1 | complement resistance protein TraT | - |
| GBF15_RS24300 () | 29893..30390 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| GBF15_RS24305 () | 30409..33228 | - | 2820 | WP_001007062.1 | conjugal transfer mating pair stabilization protein TraG | - |
| GBF15_RS24310 () | 33225..34598 | - | 1374 | WP_000944328.1 | conjugal transfer protein TraH | - |
| GBF15_RS24315 () | 34616..35313 | - | 698 | Protein_35 | IS1 family transposase | - |
| GBF15_RS24320 () | 35359..35493 | - | 135 | Protein_36 | TraY domain-containing protein | - |
| GBF15_RS24325 () | 35581..36258 | - | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| GBF15_RS24330 () | 36392..36775 | - | 384 | WP_001151566.1 | relaxosome protein TraM | - |
| GBF15_RS24335 () | 37106..37708 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
| GBF15_RS24340 () | 38005..38826 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| GBF15_RS24345 () | 38945..39232 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| GBF15_RS24350 () | 39257..39463 | - | 207 | WP_000275859.1 | hypothetical protein | - |
| GBF15_RS24365 () | 40154..40312 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 40356..40580 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 40356..40580 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 40356..40580 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 40356..40580 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| GBF15_RS25610 () | 40392..40580 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| GBF15_RS24370 () | 40592..41311 | - | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| GBF15_RS24375 () | 41308..41742 | - | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| GBF15_RS24380 () | 41797..43755 | - | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| GBF15_RS24385 () | 43821..44054 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| GBF15_RS24390 () | 44117..44614 | - | 498 | WP_042045560.1 | single-stranded DNA-binding protein | - |
| GBF15_RS24395 () | 44764..46665 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| GBF15_RS25615 () | 47960..48238 | - | 279 | WP_049291346.1 | hypothetical protein | - |
| GBF15_RS24415 () | 48264..48827 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| GBF15_RS24420 () | 48875..50236 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| GBF15_RS24425 () | 50288..50518 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| GBF15_RS24435 () | 51553..51744 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| GBF15_RS24440 () | 51741..52163 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| GBF15_RS24445 () | 52210..52512 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| GBF15_RS24455 () | 53052..53828 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| GBF15_RS24460 () | 53879..54313 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| GBF15_RS24465 () | 54327..54548 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| GBF15_RS24470 () | 54549..55232 | - | 684 | WP_000086185.1 | DNA methylase | - |
| GBF15_RS24475 () | 55309..55613 | - | 305 | Protein_62 | hypothetical protein | - |
| GBF15_RS24480 () | 55617..56519 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| GBF15_RS24495 () | 57386..58357 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| GBF15_RS24500 () | 58357..59523 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| GBF15_RS24505 () | 60111..60866 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| GBF15_RS24510 () | 61586..62392 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| GBF15_RS24515 () | 62393..62698 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| GBF15_RS24520 () | 62700..62918 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| GBF15_RS24525 () | 63626..64621 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| GBF15_RS24530 () | 64625..65557 | + | 933 | WP_000991832.1 | hypothetical protein | - |
| GBF15_RS24535 () | 65694..66391 | - | 698 | Protein_72 | IS1 family transposase IS1R | Transposase |
| GBF15_RS24540 () | 66605..69721 | - | 3117 | WP_001553854.1 | HsdR family type I site-specific deoxyribonuclease | - |
| GBF15_RS24545 () | 69843..71126 | - | 1284 | WP_001617890.1 | restriction endonuclease subunit S | - |
| GBF15_RS24550 () | 71123..72679 | - | 1557 | WP_001617892.1 | type I restriction-modification system subunit M | - |
| GBF15_RS24555 () | 72862..73083 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GBF15_RS24560 () | 73083..73463 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| GBF15_RS24565 () | 73468..73647 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| GBF15_RS24570 () | 73675..74034 | + | 360 | WP_001513660.1 | hypothetical protein | - |
| GBF15_RS24575 () | 73958..74332 | + | 375 | Protein_80 | IS3 family transposase ISEc52 | Transposase |
| GBF15_RS24580 () | 74361..75058 | + | 698 | Protein_81 | IS1 family transposase IS1R | Transposase |
| GBF15_RS24585 () | 75294..76310 | - | 1017 | WP_152406418.1 | IS5 family transposase IS5D | Transposase |
| GBF15_RS24590 () | 76518..77921 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| GBF15_RS24595 () | 77908..78840 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| GBF15_RS24600 () | 78949..79278 | - | 330 | Protein_85 | TOBE domain-containing protein | - |
| GBF15_RS24605 () | 79294..79991 | - | 698 | Protein_86 | IS1 family transposase IS1R | Transposase |
| GBF15_RS24610 () | 80049..80297 | + | 249 | Protein_87 | abortive infection family protein | - |
| GBF15_RS24615 () | 80666..81397 | - | 732 | WP_001617898.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|