MGE detailed information
MGE type: Prophage MGE length: 37551 bp
Accession: NZ_CP045187 Location: 946186..983736 Organism: Staphylococcus haemolyticus strain VB19458 Replicon: chromosome
Accession: NZ_CP045187 Location: 946186..983736 Organism: Staphylococcus haemolyticus strain VB19458 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5R78_RS04505 () | 941964..943376 | + | 1413 | WP_011275243.1 | F0F1 ATP synthase subunit beta | - |
| D5R78_RS04510 () | 943397..943798 | + | 402 | WP_011275244.1 | F0F1 ATP synthase subunit epsilon | - |
| D5R78_RS04515 () | 943926..944159 | + | 234 | WP_011275245.1 | DUF1146 family protein | - |
| D5R78_RS04520 () | 944264..945529 | + | 1266 | WP_033079610.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| D5R78_RS04525 () | 945569..946006 | + | 438 | WP_011275247.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| D5R78_RS04530 () | 946186..946629 | - | 444 | WP_011275248.1 | YwpF-like family protein | - |
| D5R78_RS04535 () | 946817..947215 | + | 399 | WP_011275249.1 | single-stranded DNA-binding protein | - |
| D5R78_RS04540 () | 947554..948261 | + | 708 | WP_011275250.1 | transglycosylase SceD | - |
| D5R78_RS04545 () | 948549..949238 | + | 690 | WP_011275251.1 | thiaminase II | - |
| D5R78_RS04550 () | 949231..950052 | + | 822 | WP_119880988.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| D5R78_RS04555 () | 950045..950836 | + | 792 | WP_011275253.1 | hydroxyethylthiazole kinase | - |
| D5R78_RS04560 () | 950838..951476 | + | 639 | WP_011275254.1 | thiamine phosphate synthase | - |
| D5R78_RS04565 () | 951565..952440 | + | 876 | WP_011275255.1 | membrane protein insertase YidC | - |
| D5R78_RS04570 () | 952635..953947 | + | 1313 | Protein_905 | ISL3 family transposase ISSha1 | Transposase |
| D5R78_RS04575 () | 953994..954635 | - | 642 | WP_119881121.1 | HD domain-containing protein | - |
| D5R78_RS04580 () | 954735..956219 | - | 1485 | WP_119881119.1 | cardiolipin synthase | - |
| D5R78_RS04585 () | 956406..956699 | + | 294 | WP_011275258.1 | copper-sensing transcriptional repressor CsoR | Antitoxin Detail |
| D5R78_RS04590 () | 956711..956917 | + | 207 | WP_011275259.1 | heavy-metal-associated domain-containing protein | Toxin Detail |
| D5R78_RS04595 () | 957025..957162 | + | 138 | WP_011275260.1 | hypothetical protein | - |
| D5R78_RS04600 () | 957459..959124 | + | 1666 | Protein_911 | IS1182 family transposase | - |
| D5R78_RS04605 () | 959099..960298 | - | 1200 | WP_119881069.1 | rod shape-determining protein RodA | - |
| D5R78_RS04610 () | 960716..961786 | + | 1071 | WP_011275263.1 | D-alanine--D-alanine ligase | - |
| D5R78_RS04615 () | 961802..963157 | + | 1356 | WP_011275264.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| D5R78_RS04620 () | 963428..964939 | + | 1512 | WP_016931362.1 | DEAD/DEAH box helicase | - |
| D5R78_RS04625 () | 965105..965584 | + | 480 | WP_011275266.1 | PH domain-containing protein | - |
| D5R78_RS04630 () | 965577..967100 | + | 1524 | WP_016931363.1 | PH domain-containing protein | - |
| D5R78_RS04635 () | 967093..967620 | + | 528 | WP_033080076.1 | PH domain-containing protein | - |
| D5R78_RS04640 () | 967630..967989 | + | 360 | WP_011275269.1 | holo-ACP synthase | - |
| D5R78_RS04645 () | 968085..969233 | + | 1149 | WP_016931365.1 | alanine racemase | - |
| D5R78_RS04650 () | 969319..969489 | + | 171 | WP_011275271.1 | type II toxin-antitoxin system antitoxin MazE | Antitoxin Detail |
| D5R78_RS04655 () | 969486..969851 | + | 366 | WP_011275272.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| D5R78_RS04660 () | 970159..971160 | + | 1002 | WP_011275273.1 | PP2C family protein-serine/threonine phosphatase | - |
| D5R78_RS04665 () | 971259..971585 | + | 327 | WP_011275274.1 | anti-sigma factor antagonist | - |
| D5R78_RS04670 () | 971587..972066 | + | 480 | WP_011275275.1 | anti-sigma B factor RsbW | - |
| D5R78_RS04675 () | 972041..972811 | + | 771 | WP_011275276.1 | RNA polymerase sigma factor SigB | - |
| D5R78_RS04680 () | 973061..975208 | + | 2148 | WP_016931366.1 | RNA-binding transcriptional accessory protein | - |
| D5R78_RS04685 () | 975201..975656 | + | 456 | WP_016931367.1 | SprT family protein | - |
| D5R78_RS04715 () | 982032..983695 | + | 1664 | Protein_929 | IS1182 family transposase | - |
| D5R78_RS04720 () | 983699..984967 | - | 1269 | WP_011275280.1 | threonine ammonia-lyase IlvA | - |
| D5R78_RS04725 () | 984974..985549 | - | 576 | WP_011275281.1 | 3-isopropylmalate dehydratase small subunit | - |
| D5R78_RS04730 () | 985552..986922 | - | 1371 | WP_011275282.1 | 3-isopropylmalate dehydratase large subunit | - |
| D5R78_RS04735 () | 986940..987980 | - | 1041 | WP_011275283.1 | 3-isopropylmalate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|