MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 24713 bp
Accession: NZ_CP045097 Location: 1936734..1961446 Organism: Pectobacterium carotovorum strain RC5297 Replicon: chromosome
Accession: NZ_CP045097 Location: 1936734..1961446 Organism: Pectobacterium carotovorum strain RC5297 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F9W95_RS08590 (F9W95_08630) | 1932224..1932646 | + | 423 | WP_103861253.1 | MarR family transcriptional regulator | - |
| F9W95_RS08595 (F9W95_08635) | 1932713..1933900 | - | 1188 | WP_103861690.1 | MFS transporter | - |
| F9W95_RS08600 (F9W95_08640) | 1934016..1934972 | + | 957 | WP_116362578.1 | AraC family transcriptional regulator | - |
| F9W95_RS08605 (F9W95_08645) | 1935307..1935786 | + | 480 | WP_116362579.1 | hypothetical protein | - |
| F9W95_RS08610 (F9W95_08655) | 1936360..1936569 | - | 210 | WP_103942719.1 | hypothetical protein | - |
| F9W95_RS08615 (F9W95_08660) | 1937136..1938527 | + | 1392 | WP_240004726.1 | UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase | VF |
| F9W95_RS08620 (F9W95_08665) | 1938517..1939803 | + | 1287 | WP_130621806.1 | outer membrane beta-barrel protein | - |
| F9W95_RS08625 (F9W95_08670) | 1939805..1940362 | + | 558 | WP_103942715.1 | hypothetical protein | VF |
| F9W95_RS08630 (F9W95_08675) | 1940365..1942497 | + | 2133 | WP_130621807.1 | polysaccharide biosynthesis tyrosine autokinase | - |
| F9W95_RS08635 (F9W95_08680) | 1942511..1943722 | + | 1212 | WP_103942710.1 | capsular biosynthesis protein | - |
| F9W95_RS08640 (F9W95_08685) | 1943719..1945101 | + | 1383 | WP_240004671.1 | capsular biosynthesis protein | - |
| F9W95_RS08645 (F9W95_08690) | 1945094..1946083 | + | 990 | WP_103861243.1 | hypothetical protein | VF |
| F9W95_RS08650 (F9W95_08695) | 1946093..1947304 | + | 1212 | WP_240004727.1 | glycosyltransferase family 4 protein | - |
| F9W95_RS08655 (F9W95_08700) | 1947306..1948418 | + | 1113 | WP_039507741.1 | glycosyltransferase family 4 protein | - |
| F9W95_RS08660 (F9W95_08705) | 1948421..1948828 | + | 408 | WP_039490298.1 | hypothetical protein | - |
| F9W95_RS08665 (F9W95_08710) | 1948867..1950279 | + | 1413 | WP_109225476.1 | DUF4832 domain-containing protein | - |
| F9W95_RS08670 (F9W95_08715) | 1950306..1950806 | + | 501 | WP_103861241.1 | Serine acetyltransferase | VF |
| F9W95_RS08675 (F9W95_08720) | 1951013..1951299 | + | 287 | Protein_1687 | DUF1778 domain-containing protein | - |
| F9W95_RS08680 (F9W95_08730) | 1951420..1951638 | - | 219 | WP_180783082.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| F9W95_RS08685 (F9W95_08735) | 1951653..1951901 | - | 249 | WP_010299606.1 | helix-turn-helix transcriptional regulator | - |
| F9W95_RS08690 (F9W95_08740) | 1951908..1952050 | + | 143 | Protein_1690 | helix-turn-helix domain-containing protein | - |
| F9W95_RS08695 (F9W95_08745) | 1952551..1952844 | + | 294 | WP_019844370.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| F9W95_RS08700 (F9W95_08750) | 1952841..1953329 | + | 489 | WP_233972555.1 | GNAT family N-acetyltransferase | Toxin Detail |
| F9W95_RS08705 (F9W95_08760) | 1954190..1955215 | - | 1026 | WP_120358785.1 | IS630 family transposase ISPlu19 | Transposase |
| F9W95_RS08710 (F9W95_08765) | 1955266..1955505 | - | 240 | WP_240004672.1 | RloB family protein | - |
| F9W95_RS08715 (F9W95_08770) | 1955505..1956833 | - | 1329 | WP_233972554.1 | ATP-binding protein | - |
| F9W95_RS08720 (F9W95_08775) | 1957082..1957387 | - | 306 | WP_233972553.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| F9W95_RS08725 (F9W95_08780) | 1957390..1957608 | - | 219 | WP_015855076.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| F9W95_RS08730 (F9W95_08785) | 1957667..1958410 | - | 744 | WP_233972552.1 | MobC family replication-relaxation protein | - |
| F9W95_RS08735 | 1958552..1958722 | + | 171 | WP_240004673.1 | hypothetical protein | - |
| F9W95_RS08740 (F9W95_08795) | 1959313..1959654 | - | 342 | WP_180746327.1 | hypothetical protein | - |
| F9W95_RS08745 | 1959795..1959965 | + | 171 | WP_162847981.1 | hypothetical protein | - |
| F9W95_RS08750 (F9W95_08800) | 1960107..1961366 | - | 1260 | WP_233972551.1 | Prophage integrase IntS ; Integrase | Integrase |
| F9W95_RS08760 (F9W95_08810) | 1962280..1964433 | + | 2154 | WP_233979848.1 | ornithine decarboxylase | - |
| F9W95_RS08765 (F9W95_08815) | 1964510..1965961 | - | 1452 | WP_103972490.1 | L-asparagine permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|