MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 75855 bp
Accession: NZ_CP044511 Location: 1..75855 Organism: Leptospira interrogans serovar Canicola strain LJ178 Replicon: plasmid p1
Accession: NZ_CP044511 Location: 1..75855 Organism: Leptospira interrogans serovar Canicola strain LJ178 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F8A85_RS20195 () | 1..1098 | + | 1098 | Protein_0 | IS3 family transposase | - |
| F8A85_RS20200 () | 1162..1809 | - | 648 | WP_151419861.1 | IS3 family transposase IS1501 | Transposase |
| F8A85_RS20205 () | 1989..2288 | - | 300 | WP_000678552.1 | IS3 family transposase IS1501 | Transposase |
| F8A85_RS20215 () | 2939..3280 | - | 342 | WP_000240418.1 | endoribonuclease MazF | Toxin Detail |
| F8A85_RS20220 () | 3274..3510 | - | 237 | WP_000443825.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| F8A85_RS20225 () | 3855..4277 | - | 423 | WP_000402980.1 | hypothetical protein | - |
| F8A85_RS20230 () | 4326..4538 | - | 213 | WP_000447737.1 | hypothetical protein | - |
| F8A85_RS20235 () | 4762..5085 | - | 324 | WP_000237066.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| F8A85_RS20240 () | 5079..5327 | - | 249 | WP_000648189.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| F8A85_RS20245 () | 6114..6328 | + | 215 | Protein_9 | hypothetical protein | - |
| F8A85_RS20250 () | 6553..7332 | + | 780 | WP_000905289.1 | Internalin-A | VF |
| F8A85_RS20255 () | 7604..8542 | + | 939 | WP_000852605.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| F8A85_RS20260 () | 9108..9263 | - | 156 | WP_001976969.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| F8A85_RS20265 () | 9488..10501 | - | 1014 | WP_000427241.1 | hypothetical protein | - |
| F8A85_RS20270 () | 10690..11280 | - | 591 | WP_002116780.1 | hypothetical protein | - |
| F8A85_RS20275 () | 12627..13532 | - | 906 | WP_000573253.1 | hypothetical protein | - |
| F8A85_RS20280 () | 13563..14171 | - | 609 | WP_000120893.1 | hypothetical protein | - |
| F8A85_RS20285 () | 14249..14632 | - | 384 | WP_000047378.1 | transcriptional regulator | - |
| F8A85_RS20295 () | 15014..15241 | + | 228 | WP_000236475.1 | hypothetical protein | - |
| F8A85_RS20300 () | 15260..16423 | + | 1164 | WP_000033046.1 | helix-turn-helix domain-containing protein | - |
| F8A85_RS20305 () | 16746..17822 | + | 1077 | WP_002116768.1 | DDE-type integrase/transposase/recombinase | - |
| F8A85_RS20310 () | 18358..18771 | + | 414 | WP_000401762.1 | hypothetical protein | - |
| F8A85_RS20315 () | 18781..19086 | + | 306 | WP_000249677.1 | hypothetical protein | - |
| F8A85_RS20320 () | 19428..20117 | - | 690 | WP_000217443.1 | hypothetical protein | - |
| F8A85_RS20325 () | 20114..23257 | - | 3144 | WP_001107227.1 | efflux RND transporter permease subunit | - |
| F8A85_RS20330 () | 23227..26328 | - | 3102 | WP_000876357.1 | efflux RND transporter permease subunit | - |
| F8A85_RS20335 () | 26331..27830 | - | 1500 | WP_001145362.1 | efflux RND transporter periplasmic adaptor subunit | - |
| F8A85_RS20340 () | 27836..28489 | - | 654 | WP_000581835.1 | hypothetical protein | - |
| F8A85_RS20345 () | 28486..29229 | - | 744 | WP_000713122.1 | lipoprotein | - |
| F8A85_RS20350 () | 29241..32891 | - | 3651 | WP_000816205.1 | Ig-like domain-containing protein | - |
| F8A85_RS20355 () | 32896..34650 | - | 1755 | WP_000152523.1 | TolC family protein | - |
| F8A85_RS20360 () | 35427..35990 | - | 564 | WP_001009550.1 | TPR repeat-containing protein YrrB | VF |
| F8A85_RS21150 () | 37282..37434 | + | 153 | WP_170317417.1 | hypothetical protein | - |
| F8A85_RS20375 () | 37604..38671 | - | 1068 | WP_000492007.1 | hypothetical protein | - |
| F8A85_RS21155 () | 39261..39419 | - | 159 | WP_002116741.1 | hypothetical protein | - |
| F8A85_RS20385 () | 39589..40065 | - | 477 | WP_000725697.1 | hypothetical protein | - |
| F8A85_RS20390 () | 40275..40637 | - | 363 | WP_000832008.1 | hypothetical protein | - |
| F8A85_RS20395 () | 40639..40920 | - | 282 | WP_000746430.1 | hypothetical protein | - |
| F8A85_RS20400 () | 41012..41224 | + | 213 | WP_000378744.1 | hypothetical protein | - |
| F8A85_RS20405 () | 41391..42014 | - | 624 | WP_000700546.1 | hypothetical protein | - |
| F8A85_RS20410 () | 42025..43302 | - | 1278 | WP_002116783.1 | M23 family metallopeptidase | - |
| F8A85_RS20415 () | 43576..44127 | - | 552 | WP_002106322.1 | hypothetical protein | - |
| F8A85_RS20420 () | 44137..50910 | - | 6774 | WP_002116759.1 | TIGR04388 family protein | - |
| F8A85_RS20425 () | 51483..52535 | - | 1053 | WP_000908432.1 | hypothetical protein | - |
| F8A85_RS20430 () | 53191..54627 | - | 1437 | WP_017858614.1 | DNA-binding protein | - |
| F8A85_RS20435 () | 55020..55931 | - | 912 | WP_000253890.1 | ParB/RepB/Spo0J family partition protein | - |
| F8A85_RS20440 () | 55959..56783 | - | 825 | WP_000078859.1 | ParA family protein | - |
| F8A85_RS20445 () | 56971..57348 | - | 378 | WP_000105514.1 | hypothetical protein | - |
| F8A85_RS20455 () | 58410..59825 | + | 1416 | WP_017858612.1 | helix-turn-helix domain-containing protein | - |
| F8A85_RS20460 () | 60545..61483 | + | 939 | WP_002063581.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| F8A85_RS20475 () | 63093..63950 | + | 858 | WP_000041749.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| F8A85_RS20480 () | 64380..64493 | + | 114 | Protein_51 | IS3 family transposase | - |
| F8A85_RS20485 () | 64488..65041 | - | 554 | Protein_52 | IS3 family transposase IS1501 | Transposase |
| F8A85_RS20490 () | 65282..65644 | + | 363 | WP_001108499.1 | hypothetical protein | - |
| F8A85_RS20495 () | 65641..66304 | - | 664 | Protein_54 | tyrosine-type recombinase/integrase | - |
| F8A85_RS20500 () | 66398..72289 | - | 5892 | WP_000203570.1 | ATP-binding protein | - |
| F8A85_RS20505 () | 72502..73965 | + | 1464 | WP_000888145.1 | hypothetical protein | - |
| F8A85_RS20510 () | 74369..75280 | + | 912 | WP_000691459.1 | hypothetical protein | - |
| F8A85_RS20515 () | 75377..75814 | + | 438 | WP_000206185.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|