MGE detailed information
MGE type: Conjugative plasmid MGE length: 83958 bp
Accession: NZ_CP044440 Location: 1..83958 Organism: Escherichia coli strain HeN100 Replicon: plasmid pHeN100_03
Accession: NZ_CP044440 Location: 1..83958 Organism: Escherichia coli strain HeN100 Replicon: plasmid pHeN100_03
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HeN100_RS01165 (1) | 1..858 | + | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| HeN100_RS01170 (1797) | 1797..2450 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HeN100_RS01175 (2543) | 2543..2800 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HeN100_RS01180 (2733) | 2733..3134 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HeN100_RS01185 (3383) | 3383..3798 | + | 416 | Protein_4 | IS1-like element IS1B family transposase | - |
| HeN100_RS01190 (3834) | 3834..4379 | - | 546 | Protein_5 | Tn3 family transposase | - |
| HeN100_RS01195 (4445) | 4445..5149 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HeN100_RS01200 (5235) | 5235..6209 | + | 975 | WP_250664889.1 | hypothetical protein | - |
| HeN100_RS01205 (6224) | 6224..7468 | + | 1245 | WP_015060702.1 | DUF1173 family protein | - |
| HeN100_RS01210 (7479) | 7479..7931 | + | 453 | WP_004993232.1 | hypothetical protein | - |
| HeN100_RS01215 (7993) | 7993..8430 | - | 438 | WP_017480454.1 | hypothetical protein | - |
| HeN100_RS01220 (8538) | 8538..9670 | + | 1133 | WP_223155595.1 | IS3-like element ISAba14 family transposase | - |
| HeN100_RS01225 (9776) | 9776..10555 | + | 780 | WP_014386410.1 | APH(3')-VI family aminoglycoside O-phosphotransferase | - |
| HeN100_RS01230 (10764) | 10764..11732 | + | 969 | WP_005804963.1 | IS30 family transposase | - |
| HeN100_RS01235 (11833) | 11833..12645 | + | 813 | WP_004201164.1 | subclass B1 metallo-beta-lactamase NDM-1 | - |
| HeN100_RS01240 (12649) | 12649..13014 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| HeN100_RS01245 (13019) | 13019..13657 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| HeN100_RS01250 (13668) | 13668..14225 | - | 558 | Protein_17 | twin-arginine translocation (TAT) pathway signal sequence domain protein | - |
| HeN100_RS01255 (14325) | 14325..14699 | - | 375 | Protein_18 | protein-disulfide reductase DsbD family protein | - |
| HeN100_RS01260 (14704) | 14704..15033 | - | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| HeN100_RS01265 (15227) | 15227..15517 | + | 291 | WP_004201172.1 | co-chaperone GroES | - |
| HeN100_RS01270 (15573) | 15573..17213 | + | 1641 | WP_004201176.1 | chaperonin GroEL | - |
| HeN100_RS01275 (17438) | 17438..18931 | + | 1494 | WP_043907034.1 | IS91 family transposase | - |
| HeN100_RS01280 (19187) | 19187..19432 | - | 246 | Protein_23 | hypothetical protein | - |
| HeN100_RS01285 (19457) | 19457..20161 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HeN100_RS01290 (20212) | 20212..20829 | - | 618 | Protein_25 | transposase zinc-binding domain-containing protein | - |
| HeN100_RS01295 (20839) | 20839..21027 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| HeN100_RS01300 (21119) | 21119..21655 | + | 537 | WP_064441864.1 | recombinase family protein | - |
| HeN100_RS01305 (21838) | 21838..22698 | + | 861 | WP_000027057.1 | broad-spectrum class A beta-lactamase TEM-1 | - |
| HeN100_RS01310 (22868) | 22868..23623 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1 | - |
| HeN100_RS01315 (23704) | 23704..24018 | - | 315 | Protein_30 | hypothetical protein | - |
| HeN100_RS01320 (24073) | 24073..24777 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HeN100_RS01325 (24843) | 24843..24908 | + | 66 | Protein_32 | IS1 family transposase | - |
| HeN100_RS01330 (26357) | 26357..26591 | + | 235 | Protein_33 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HeN100_RS01335 (26719) | 26719..26922 | + | 204 | Protein_34 | hypothetical protein | - |
| HeN100_RS01340 (27123) | 27123..27473 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| HeN100_RS01345 (27476) | 27476..28438 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| HeN100_RS01350 (28585) | 28585..28878 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| HeN100_RS01355 (28955) | 28955..29638 | + | 684 | WP_000085883.1 | DNA methylase | - |
| HeN100_RS01360 (29639) | 29639..29860 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| HeN100_RS01365 (29874) | 29874..30308 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| HeN100_RS01370 (30359) | 30359..31135 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| HeN100_RS01375 (31553) | 31553..31978 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| HeN100_RS01380 (32025) | 32025..32447 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| HeN100_RS01385 (32444) | 32444..32635 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| HeN100_RS01390 (32949) | 32949..34616 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| HeN100_RS01395 (35345) | 35345..35499 | - | 155 | Protein_46 | hypothetical protein | - |
| HeN100_RS01400 (36016) | 36016..36246 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| HeN100_RS01405 (36298) | 36298..37659 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| HeN100_RS01410 (37706) | 37706..38269 | + | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| HeN100_RS01415 (38355) | 38355..38810 | - | 456 | Protein_50 | hypothetical protein | - |
| HeN100_RS01420 (39112) | 39112..39639 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| HeN100_RS01425 (39697) | 39697..39930 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| HeN100_RS01430 (39991) | 39991..42014 | + | 2024 | Protein_53 | ParB/RepB/Spo0J family partition protein | - |
| HeN100_RS01435 (42083) | 42083..42517 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| HeN100_RS01440 (42514) | 42514..43276 | + | 763 | Protein_55 | plasmid SOS inhibition protein A | - |
| HeN100_RS01445 (43254) | 43254..43433 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - (43245) | 43245..43469 | + | 225 | NuclAT_0 | - | - |
| - (43245) | 43245..43469 | + | 225 | NuclAT_0 | - | - |
| - (43245) | 43245..43469 | + | 225 | NuclAT_0 | - | - |
| - (43245) | 43245..43469 | + | 225 | NuclAT_0 | - | - |
| HeN100_RS01450 (43455) | 43455..43604 | + | 150 | Protein_57 | plasmid maintenance protein Mok | - |
| HeN100_RS01455 (43546) | 43546..43671 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HeN100_RS01460 (43990) | 43990..44286 | - | 297 | Protein_59 | hypothetical protein | - |
| HeN100_RS01465 (44586) | 44586..44882 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| HeN100_RS01470 (44993) | 44993..45814 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| HeN100_RS01475 (46111) | 46111..46758 | - | 648 | WP_015059008.1 | transglycosylase SLT domain-containing protein | - |
| HeN100_RS01480 (47035) | 47035..47418 | + | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HeN100_RS01485 (47609) | 47609..48295 | + | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| HeN100_RS01490 (48389) | 48389..48616 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| HeN100_RS01495 (48650) | 48650..49015 | + | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| HeN100_RS01500 (49030) | 49030..49341 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HeN100_RS01505 (49363) | 49363..49929 | + | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| HeN100_RS01510 (49916) | 49916..50644 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| HeN100_RS01515 (50644) | 50644..52071 | + | 1428 | WP_032297072.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| HeN100_RS01520 (52061) | 52061..52651 | + | 591 | WP_000002778.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| HeN100_RS01525 (52644) | 52644..52835 | + | 192 | WP_032072783.1 | conjugal transfer protein TrbD | - |
| HeN100_RS01530 (52847) | 52847..53098 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| HeN100_RS01535 (53095) | 53095..53610 | + | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HeN100_RS01540 (53745) | 53745..53966 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| HeN100_RS01545 (54126) | 54126..56753 | + | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| HeN100_RS01550 (56750) | 56750..57136 | + | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| HeN100_RS01555 (57133) | 57133..57765 | + | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| HeN100_RS01560 (57762) | 57762..58754 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| HeN100_RS01565 (58781) | 58781..59089 | + | 309 | WP_000412447.1 | hypothetical protein | - |
| HeN100_RS01570 (59152) | 59152..59673 | + | 522 | WP_015059014.1 | hypothetical protein | - |
| HeN100_RS01575 (59700) | 59700..60338 | + | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HeN100_RS01580 (60335) | 60335..60706 | + | 372 | WP_000056336.1 | hypothetical protein | - |
| HeN100_RS01585 (60732) | 60732..61154 | + | 423 | WP_001229309.1 | HNH endonuclease signature motif containing protein | - |
| HeN100_RS01590 (61151) | 61151..63001 | + | 1851 | WP_015059015.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HeN100_RS01595 (63028) | 63028..63285 | + | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| HeN100_RS01600 (63278) | 63278..64021 | + | 744 | WP_015059017.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HeN100_RS01605 (64182) | 64182..64418 | + | 237 | WP_000270010.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HeN100_RS01610 (64405) | 64405..64950 | + | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HeN100_RS01615 (64940) | 64940..65254 | + | 315 | WP_001384255.1 | P-type conjugative transfer protein TrbJ | - |
| HeN100_RS01620 (65208) | 65208..65600 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| HeN100_RS01625 (65587) | 65587..66960 | + | 1374 | WP_000944325.1 | conjugal transfer pilus assembly protein TraH | - |
| HeN100_RS01630 (66957) | 66957..69773 | + | 2817 | WP_015059018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| HeN100_RS01635 (69806) | 69806..70327 | + | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| HeN100_RS01640 (70352) | 70352..71083 | + | 732 | WP_021559024.1 | conjugal transfer complement resistance protein TraT | - |
| HeN100_RS01645 (71286) | 71286..72023 | + | 738 | WP_015059020.1 | hypothetical protein | - |
| HeN100_RS01650 (72074) | 72074..74299 | + | 2226 | WP_000009363.1 | type IV conjugative transfer system coupling protein TraD | - |
| HeN100_RS01655 (74299) | 74299..79569 | + | 5271 | WP_015059021.1 | conjugative transfer relaxase/helicase TraI | - |
| HeN100_RS01660 (79589) | 79589..80335 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| HeN100_RS01665 (80390) | 80390..80950 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| HeN100_RS01670 (81082) | 81082..81282 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| HeN100_RS01675 (81668) | 81668..82267 | + | 600 | WP_032083981.1 | PIN domain-containing protein | - |
| HeN100_RS01680 (82329) | 82329..82661 | + | 333 | WP_152916585.1 | hypothetical protein | - |
| - (82862) | 82862..82921 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (82862) | 82862..82921 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (82862) | 82862..82921 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (82862) | 82862..82921 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| HeN100_RS01685 (82966) | 82966..83115 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| HeN100_RS01690 (83399) | 83399..83647 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|