MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 99949 bp
Accession: NZ_CP044424 Location: 1..99949 Organism: Paracoccus pantotrophus strain DSM 2944 Replicon: plasmid pPAN1
Accession: NZ_CP044424 Location: 1..99949 Organism: Paracoccus pantotrophus strain DSM 2944 Replicon: plasmid pPAN1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ESD82_RS07410 () | 1..1851 | + | 1851 | WP_147429446.1 | PQQ-dependent methanol/ethanol family dehydrogenase | - |
| ESD82_RS07415 () | 1925..2545 | + | 621 | WP_147429445.1 | Secreted effector protein PipB2 | VF |
| ESD82_RS07420 () | 2527..2931 | + | 405 | WP_147429444.1 | hypothetical protein | - |
| ESD82_RS07425 () | 3013..3741 | + | 729 | WP_147429443.1 | response regulator transcription factor | - |
| ESD82_RS07430 () | 3781..4935 | + | 1155 | WP_104491161.1 | FIST C-terminal domain-containing protein | - |
| ESD82_RS07435 () | 4935..7118 | + | 2184 | WP_208852057.1 | PAS-domain containing protein | - |
| ESD82_RS21745 () | 7692..7868 | - | 177 | WP_167521726.1 | hypothetical protein | - |
| ESD82_RS07440 () | 8211..9056 | - | 846 | WP_147429441.1 | hypothetical protein | - |
| ESD82_RS07445 () | 9066..10238 | - | 1173 | WP_147429440.1 | DUF3696 domain-containing protein | - |
| ESD82_RS07450 () | 10235..11596 | - | 1362 | WP_151208813.1 | DUF262 domain-containing protein | - |
| ESD82_RS07455 () | 11869..14394 | - | 2526 | WP_147429494.1 | DEAD/DEAH box helicase | - |
| ESD82_RS07460 () | 14423..15460 | - | 1038 | WP_147429493.1 | DUF1837 domain-containing protein | - |
| ESD82_RS07465 () | 15898..16278 | - | 381 | WP_147429492.1 | helix-turn-helix transcriptional regulator | - |
| ESD82_RS07470 () | 16366..17370 | + | 1005 | WP_147429491.1 | saccharopine dehydrogenase NADP-binding domain-containing protein | - |
| ESD82_RS07475 () | 17544..18733 | + | 1190 | WP_114669626.1 | IS3 family transposase ISOba1 | Transposase |
| ESD82_RS07480 () | 18679..19953 | - | 1275 | WP_147429490.1 | type I restriction endonuclease subunit R | - |
| ESD82_RS07485 () | 19916..20785 | + | 870 | WP_147429489.1 | hypothetical protein | - |
| ESD82_RS07490 () | 21027..21422 | + | 396 | WP_018000155.1 | IS66 family transposase ISAli15 | Transposase |
| ESD82_RS07495 () | 21419..21766 | + | 348 | WP_018000156.1 | IS66 family transposase ISAzs18 | Transposase |
| ESD82_RS07500 () | 21826..22602 | + | 777 | WP_147429488.1 | IS66 family transposase ISPre3 | Transposase |
| ESD82_RS07505 () | 22602..23000 | - | 399 | Protein_20 | hypothetical protein | - |
| ESD82_RS07510 () | 23100..25271 | - | 2172 | WP_147429487.1 | ParB/RepB/Spo0J family partition protein | - |
| ESD82_RS07515 () | 25451..26662 | - | 1212 | WP_032490181.1 | replication initiation protein RepC | - |
| ESD82_RS07520 () | 26845..27837 | - | 993 | WP_123130498.1 | plasmid partitioning protein RepB | - |
| ESD82_RS07525 () | 27837..29021 | - | 1185 | WP_123130488.1 | Sporulation initiation inhibitor protein Soj | VF |
| ESD82_RS07530 () | 29237..29464 | + | 228 | WP_123130489.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| ESD82_RS07535 () | 29454..29849 | + | 396 | WP_123130490.1 | PIN domain-containing protein | Toxin Detail |
| ESD82_RS07540 () | 29928..30812 | - | 885 | WP_123130491.1 | Tn3 family transposase ISPsy42 | Transposase |
| ESD82_RS07545 () | 31039..32106 | + | 1068 | WP_147429486.1 | hypothetical protein | - |
| ESD82_RS07550 () | 32198..32722 | - | 525 | WP_167521732.1 | PIN domain-containing protein | - |
| ESD82_RS07555 () | 32709..32966 | - | 258 | Protein_30 | IS3 family transposase ISPfe1 | Transposase |
| ESD82_RS07560 () | 33079..33159 | + | 81 | Protein_31 | IS5/IS1182 family transposase | - |
| ESD82_RS07565 () | 33268..34791 | - | 1524 | WP_147429484.1 | aldehyde dehydrogenase (NADP(+)) | - |
| ESD82_RS07570 () | 34819..35808 | - | 990 | WP_147429483.1 | ABC transporter permease | - |
| ESD82_RS07575 () | 35835..37346 | - | 1512 | WP_147429482.1 | sugar ABC transporter ATP-binding protein | - |
| ESD82_RS07580 () | 37419..38501 | - | 1083 | WP_147429481.1 | sugar ABC transporter substrate-binding protein | - |
| ESD82_RS07585 () | 38709..39416 | - | 708 | WP_147429480.1 | ribose 5-phosphate isomerase A | - |
| ESD82_RS07590 () | 39462..40301 | - | 840 | WP_147429479.1 | MurR/RpiR family transcriptional regulator | - |
| ESD82_RS07595 () | 40318..40989 | - | 672 | WP_147429478.1 | HAD-IA family hydrolase | - |
| ESD82_RS07600 () | 41008..42513 | - | 1506 | WP_147429477.1 | xylulokinase | - |
| ESD82_RS07605 () | 42517..43998 | - | 1482 | WP_147429476.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| ESD82_RS07610 () | 44252..45394 | + | 1143 | WP_147429475.1 | fumarylacetoacetate hydrolase family protein | - |
| ESD82_RS07615 () | 45391..46356 | + | 966 | WP_147429474.1 | C-terminal binding protein | - |
| ESD82_RS07620 () | 46370..47131 | + | 762 | WP_147429473.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| ESD82_RS07625 () | 47716..49371 | - | 1656 | WP_147429499.1 | BCCT family transporter | - |
| ESD82_RS21750 () | 49888..50103 | + | 216 | WP_167521727.1 | hypothetical protein | - |
| ESD82_RS07635 () | 50189..50572 | - | 384 | Protein_46 | transposase | - |
| ESD82_RS07640 () | 50641..51036 | - | 396 | WP_018000155.1 | IS66 family transposase ISAli15 | Transposase |
| ESD82_RS07645 () | 51145..52041 | + | 897 | WP_147429471.1 | IS21 family transposase ISRel5 | Transposase |
| ESD82_RS07650 () | 52192..54834 | - | 2643 | WP_147429470.1 | phosphoenolpyruvate carboxylase | - |
| ESD82_RS07655 () | 54971..56707 | - | 1737 | WP_147429469.1 | GMC family oxidoreductase N-terminal domain-containing protein | - |
| ESD82_RS07660 () | 56707..57867 | - | 1161 | WP_083539330.1 | ABC transporter substrate-binding protein | - |
| ESD82_RS07665 () | 57951..58886 | - | 936 | WP_072464218.1 | ABC transporter permease | - |
| ESD82_RS07670 () | 58883..59881 | - | 999 | WP_147429468.1 | ABC transporter permease | - |
| ESD82_RS07675 () | 59878..61404 | - | 1527 | WP_147429498.1 | Ribose import ATP-binding protein RbsA | VF |
| ESD82_RS07680 () | 61503..62864 | - | 1362 | WP_140848464.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| ESD82_RS07685 () | 63037..65034 | + | 1998 | WP_147429467.1 | substrate-binding domain-containing protein | - |
| ESD82_RS07690 () | 65018..65662 | - | 645 | WP_147429497.1 | TetR family transcriptional regulator | - |
| ESD82_RS07695 () | 65754..67070 | - | 1317 | WP_083539328.1 | glycerate kinase | - |
| ESD82_RS07700 () | 67061..67930 | - | 870 | WP_147429466.1 | sugar phosphate isomerase/epimerase | - |
| ESD82_RS07705 () | 67932..69077 | - | 1146 | WP_147429496.1 | dihydrodipicolinate synthase family protein | - |
| ESD82_RS07710 () | 69104..70264 | - | 1161 | WP_147429465.1 | Gfo/Idh/MocA family oxidoreductase | - |
| ESD82_RS07715 () | 70579..70977 | - | 399 | WP_147429464.1 | hypothetical protein | - |
| ESD82_RS21755 () | 70964..71122 | - | 159 | WP_167521728.1 | Protein VirD4 | VF |
| ESD82_RS07720 () | 71138..72085 | + | 948 | WP_167521729.1 | Protein VirD4 | VF |
| ESD82_RS07725 () | 72167..74038 | - | 1872 | WP_147429462.1 | T-DNA border endonuclease VirD2 | Relaxase |
| ESD82_RS07730 () | 74035..74784 | - | 750 | WP_147429461.1 | hypothetical protein | Relaxase |
| ESD82_RS07735 () | 75284..76006 | + | 723 | WP_147429460.1 | Protein virC1 | VF |
| ESD82_RS07740 () | 76006..76725 | + | 720 | WP_147429459.1 | hypothetical protein | - |
| ESD82_RS07745 () | 77325..78215 | - | 891 | WP_147429458.1 | DUF1738 domain-containing protein | - |
| ESD82_RS07750 () | 78304..79749 | + | 1446 | WP_147429457.1 | DUF4942 domain-containing protein | - |
| ESD82_RS07755 () | 80291..80932 | - | 642 | WP_147429456.1 | hypothetical protein | - |
| ESD82_RS07760 () | 80946..81200 | - | 255 | WP_147429455.1 | hypothetical protein | - |
| ESD82_RS07765 () | 81817..82014 | - | 198 | WP_140848564.1 | hypothetical protein | - |
| ESD82_RS07770 () | 82230..83534 | - | 1305 | WP_147429454.1 | ISL3 family transposase ISSm4 | Transposase |
| ESD82_RS07775 () | 83527..86754 | - | 3228 | WP_147429453.1 | type I restriction endonuclease subunit R | - |
| ESD82_RS07780 () | 86779..87156 | - | 378 | WP_147429452.1 | hypothetical protein | - |
| ESD82_RS21980 () | 87156..88376 | - | 1221 | WP_208852056.1 | hypothetical protein | - |
| ESD82_RS07790 () | 88384..90098 | - | 1715 | Protein_78 | DUF262 domain-containing protein | - |
| ESD82_RS07795 () | 90114..92135 | - | 2022 | WP_147429450.1 | type I restriction-modification system subunit M | - |
| ESD82_RS07800 () | 92728..92973 | + | 246 | WP_140848566.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| ESD82_RS07805 () | 92973..93398 | + | 426 | WP_167521730.1 | type II toxin-antitoxin system VapC family toxin | - |
| ESD82_RS07810 () | 93408..93590 | + | 183 | WP_116171356.1 | hypothetical protein | - |
| ESD82_RS21760 () | 93587..93760 | + | 174 | WP_166436162.1 | hypothetical protein | - |
| ESD82_RS07815 () | 93762..93956 | - | 195 | WP_116171357.1 | hypothetical protein | - |
| ESD82_RS07820 () | 94390..94692 | - | 303 | WP_104491150.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ESD82_RS07825 () | 94682..94927 | - | 246 | WP_104491151.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| ESD82_RS07830 () | 94949..95245 | - | 297 | WP_147429448.1 | hypothetical protein | - |
| ESD82_RS07835 () | 95605..96750 | + | 1146 | WP_147429447.1 | aldehyde dehydrogenase family protein | - |
| ESD82_RS07840 () | 96772..97287 | - | 516 | WP_051416320.1 | hypothetical protein | - |
| ESD82_RS07845 () | 97463..98149 | + | 687 | WP_028714065.1 | cytochrome c-550 PedF | - |
| ESD82_RS07850 () | 98154..98945 | + | 792 | WP_036714371.1 | quinoprotein dehydrogenase-associated SoxYZ-like carrier | - |
| ESD82_RS07855 () | 98942..99886 | + | 945 | WP_028714064.1 | quinoprotein relay system zinc metallohydrolase 1 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|