MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 44217 bp
Accession: NZ_CP044413 Location: 1..44217 Organism: Lactobacillus sp. JM1 Replicon: plasmid unnamed1
Accession: NZ_CP044413 Location: 1..44217 Organism: Lactobacillus sp. JM1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3I00_RS10155 () | 2153..2385 | - | 233 | Protein_1 | UV-resistance | - |
| F3I00_RS10170 () | 3205..3657 | - | 453 | WP_007124631.1 | hypothetical protein | - |
| F3I00_RS10180 () | 3838..4341 | + | 504 | Protein_3 | MFS transporter | - |
| F3I00_RS10185 () | 4400..4993 | - | 594 | WP_159311098.1 | thiamine phosphate synthase | - |
| F3I00_RS10190 () | 5158..5955 | - | 798 | WP_007124628.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| F3I00_RS10195 () | 5957..6742 | - | 786 | WP_007124627.1 | hydroxyethylthiazole kinase | - |
| F3I00_RS10200 () | 7197..8223 | + | 1027 | Protein_7 | hypothetical protein | - |
| F3I00_RS10730 () | 8215..8715 | + | 501 | Protein_8 | type II CRISPR RNA-guided endonuclease Cas9 | - |
| F3I00_RS10205 () | 8726..8941 | + | 216 | WP_003590798.1 | hypothetical protein | - |
| F3I00_RS10210 () | 8945..10061 | + | 1117 | Protein_10 | hypothetical protein | - |
| F3I00_RS10215 () | 10219..10563 | - | 345 | WP_011241744.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| F3I00_RS10220 () | 10557..10820 | - | 264 | WP_049160264.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| F3I00_RS10225 () | 10916..11140 | + | 225 | Protein_13 | hypothetical protein | - |
| F3I00_RS10230 () | 11245..11829 | + | 585 | WP_159311099.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| F3I00_RS10235 () | 12152..12778 | - | 627 | WP_159311100.1 | hypothetical protein | - |
| F3I00_RS10240 () | 12989..13273 | - | 285 | Protein_16 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| F3I00_RS10245 () | 13540..13656 | + | 117 | Protein_17 | IS3 family transposase | - |
| F3I00_RS10250 () | 13663..14115 | - | 453 | WP_021349374.1 | hypothetical protein | - |
| F3I00_RS10260 () | 14360..14452 | + | 93 | Protein_19 | recombinase family protein | - |
| F3I00_RS10265 () | 14587..15378 | + | 792 | WP_159311101.1 | AAA family ATPase | - |
| F3I00_RS10270 () | 15450..15689 | + | 240 | WP_010011603.1 | hypothetical protein | - |
| F3I00_RS10275 () | 16245..17414 | + | 1170 | WP_159311102.1 | replication initiator protein A | - |
| F3I00_RS10280 () | 17389..17685 | + | 297 | WP_023487876.1 | hypothetical protein | - |
| F3I00_RS10285 () | 17969..18241 | + | 273 | WP_007124950.1 | epsilon-antitoxin | Antitoxin Detail |
| F3I00_RS10290 () | 18244..19167 | + | 924 | WP_159311103.1 | zeta toxin family protein | Toxin Detail |
| F3I00_RS10295 () | 19157..19435 | - | 279 | WP_159311104.1 | hypothetical protein | - |
| F3I00_RS10300 () | 19458..19685 | - | 228 | WP_201288371.1 | hypothetical protein | - |
| F3I00_RS10305 () | 19939..22002 | + | 2064 | WP_159311106.1 | Mobilization protein A | Relaxase |
| F3I00_RS10310 () | 22086..22397 | + | 312 | WP_003712158.1 | hypothetical protein | - |
| F3I00_RS10315 () | 22434..23048 | + | 615 | WP_159311107.1 | hypothetical protein | - |
| F3I00_RS10320 () | 23050..23385 | + | 336 | WP_012552810.1 | CagC family type IV secretion system protein | - |
| F3I00_RS10325 () | 23406..23768 | + | 363 | WP_003590770.1 | conjugal transfer protein | - |
| F3I00_RS10330 () | 23737..24396 | + | 660 | WP_159311108.1 | conjugal transfer protein | - |
| F3I00_RS10335 () | 24408..26438 | + | 2031 | WP_159311109.1 | DUF87 domain-containing protein | - |
| F3I00_RS10340 () | 26431..27849 | + | 1419 | WP_159311110.1 | conjugal transfer protein | - |
| F3I00_RS10345 () | 27850..29004 | + | 1155 | WP_159311111.1 | CHAP domain-containing protein | - |
| F3I00_RS10350 () | 29019..29636 | + | 618 | WP_159311112.1 | hypothetical protein | - |
| F3I00_RS10355 () | 29623..29991 | + | 369 | WP_159311113.1 | thioredoxin family protein | - |
| F3I00_RS10360 () | 29992..30462 | + | 471 | WP_159311114.1 | conjugal transfer protein | - |
| F3I00_RS10365 () | 30692..32242 | + | 1551 | WP_159311115.1 | type IV secretory system conjugative DNA transfer family protein | - |
| F3I00_RS10370 () | 32257..32631 | + | 375 | WP_080379110.1 | hypothetical protein | - |
| F3I00_RS10375 () | 32655..33494 | + | 840 | WP_201288372.1 | conjugal transfer protein | - |
| F3I00_RS10380 () | 33509..33919 | + | 411 | WP_159311117.1 | hypothetical protein | - |
| F3I00_RS10385 () | 33926..36061 | + | 2136 | WP_159311118.1 | type IA DNA topoisomerase | - |
| F3I00_RS10390 () | 36184..36399 | + | 216 | WP_012552823.1 | hypothetical protein | - |
| F3I00_RS10395 () | 36403..36606 | + | 204 | WP_159311119.1 | hypothetical protein | - |
| F3I00_RS10400 () | 36581..37380 | + | 800 | WP_088899809.1 | IS5 family transposase ISCaa8 | Transposase |
| F3I00_RS10405 () | 37388..38410 | + | 1023 | Protein_48 | hypothetical protein | - |
| F3I00_RS10410 () | 38568..38657 | - | 90 | WP_021353390.1 | putative holin-like toxin | - |
| F3I00_RS10415 () | 39124..40473 | + | 1350 | WP_159311120.1 | FAD-dependent oxidoreductase | - |
| F3I00_RS10420 () | 40515..40709 | + | 195 | WP_159311122.1 | transposase | - |
| F3I00_RS10425 () | 40766..41122 | + | 357 | Protein_52 | HNH endonuclease | - |
| F3I00_RS10430 () | 41135..41638 | + | 504 | WP_159311121.1 | SMI1/KNR4 family protein | - |
| F3I00_RS10435 () | 41930..42673 | + | 744 | WP_152111341.1 | nicotinamide mononucleotide transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|