MGE detailed information
MGE type: Conjugative plasmid MGE length: 114329 bp
Accession: NZ_CP044404 Location: 1..114329 Organism: Escherichia coli strain NMBU-W10C18 Replicon: plasmid pNMBU-W10C18_01
Accession: NZ_CP044404 Location: 1..114329 Organism: Escherichia coli strain NMBU-W10C18 Replicon: plasmid pNMBU-W10C18_01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7O57_RS25050 () | 1..978 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| F7O57_RS25055 () | 1221..1961 | - | 741 | WP_001066952.1 | tyrosine-type recombinase/integrase | - |
| F7O57_RS25060 () | 2082..2270 | - | 189 | WP_033877173.1 | hypothetical protein | - |
| F7O57_RS25065 () | 2397..3137 | - | 741 | WP_029702141.1 | IS91 family transposase ISMno23 | Transposase |
| F7O57_RS25070 () | 3177..3874 | - | 698 | Protein_4 | IS1 family transposase IS1R | Transposase |
| F7O57_RS25075 () | 4090..4539 | - | 450 | WP_029702172.1 | hypothetical protein | - |
| F7O57_RS25080 () | 5066..5589 | + | 524 | Protein_6 | IS1 family transposase | - |
| F7O57_RS25085 () | 5681..5962 | - | 282 | Protein_7 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| F7O57_RS25090 () | 6218..7550 | - | 1333 | Protein_8 | group II intron reverse transcriptase/maturase | - |
| F7O57_RS25095 () | 8167..9027 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| F7O57_RS25100 () | 9210..9767 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| F7O57_RS25105 () | 10038..10742 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| F7O57_RS25110 () | 10822..10971 | - | 150 | Protein_12 | IS3 family transposase ISEhe3 | Transposase |
| F7O57_RS25115 () | 11413..12996 | + | 1584 | WP_131096459.1 | EAL domain-containing protein | - |
| F7O57_RS25120 () | 13047..13751 | - | 705 | WP_045295164.1 | GNAT family N-acetyltransferase | - |
| F7O57_RS25125 () | 14176..15120 | - | 945 | WP_113388538.1 | sensor domain-containing diguanylate cyclase | - |
| F7O57_RS25135 () | 16869..17573 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| F7O57_RS25140 () | 17632..20598 | + | 2967 | WP_173009554.1 | Tn3 family transposase ISEc63 | Transposase |
| F7O57_RS25145 () | 20632..21096 | - | 465 | Protein_19 | IS5 family transposase ISKpn26 | Transposase |
| F7O57_RS25150 () | 21442..23904 | + | 2463 | WP_057061618.1 | poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA | - |
| F7O57_RS25155 () | 23914..25935 | + | 2022 | WP_034167706.1 | Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase | VF |
| F7O57_RS25160 () | 25932..27266 | + | 1335 | WP_034167705.1 | Poly-beta-1,6-N-acetyl-D-glucosamine synthase | VF |
| F7O57_RS25165 () | 27263..27769 | + | 507 | WP_034167704.1 | Biofilm PGA synthesis protein PgaD | VF |
| F7O57_RS25170 () | 27835..27945 | + | 111 | Protein_24 | (4Fe-4S)-binding protein | - |
| F7O57_RS25175 () | 28009..28713 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| F7O57_RS25180 () | 29009..29410 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| F7O57_RS25185 () | 29343..29600 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| F7O57_RS25190 () | 29693..30346 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| F7O57_RS25195 () | 31285..32142 | - | 858 | WP_029702152.1 | incFII family plasmid replication initiator RepA | - |
| F7O57_RS25200 () | 32135..32209 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| F7O57_RS25205 () | 32445..32702 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| F7O57_RS25210 () | 32986..33192 | - | 207 | WP_032215358.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 33179..33240 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 33179..33240 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 33179..33240 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 33179..33240 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| F7O57_RS25215 () | 33379..33645 | - | 267 | WP_087757657.1 | hypothetical protein | - |
| F7O57_RS25220 () | 34020..34589 | - | 570 | WP_029702150.1 | DUF2726 domain-containing protein | - |
| F7O57_RS25225 () | 34741..35367 | - | 627 | WP_029702149.1 | hypothetical protein | - |
| F7O57_RS25230 () | 35779..35988 | - | 210 | WP_039023209.1 | hypothetical protein | - |
| F7O57_RS25235 () | 36119..36679 | - | 561 | WP_001567328.1 | fertility inhibition protein FinO | - |
| F7O57_RS25240 () | 36734..37480 | - | 747 | WP_052273601.1 | conjugal transfer pilus acetylase TraX | - |
| F7O57_RS25245 () | 37508..38254 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| F7O57_RS25250 () | 38269..39810 | - | 1542 | WP_002431311.1 | IS21 family transposase ISEc12 | Transposase |
| F7O57_RS25255 () | 40298..40975 | - | 678 | WP_000392235.1 | hypothetical protein | - |
| F7O57_RS25260 () | 41262..41474 | - | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| F7O57_RS25265 () | 41606..42166 | - | 561 | WP_001696641.1 | fertility inhibition protein FinO | - |
| F7O57_RS25270 () | 42221..42967 | - | 747 | WP_000205736.1 | conjugal transfer pilus acetylase TraX | - |
| F7O57_RS25275 () | 42987..48257 | - | 5271 | WP_087758005.1 | Multifunctional conjugation protein TraI | Relaxase |
| F7O57_RS25280 () | 48257..50473 | - | 2217 | WP_021538890.1 | type IV conjugative transfer system coupling protein TraD | - |
| F7O57_RS25285 () | 50524..51261 | - | 738 | WP_000199908.1 | hypothetical protein | - |
| F7O57_RS25290 () | 51464..52195 | - | 732 | WP_001734698.1 | complement resistance protein TraT | - |
| F7O57_RS25295 () | 52209..52718 | - | 510 | WP_024168260.1 | conjugal transfer entry exclusion protein TraS | - |
| F7O57_RS25300 () | 52715..55540 | - | 2826 | WP_029702178.1 | conjugal transfer mating pair stabilization protein TraG | - |
| F7O57_RS25305 () | 55537..56910 | - | 1374 | WP_001137364.1 | conjugal transfer protein TraH | - |
| F7O57_RS25310 () | 56897..57322 | - | 426 | WP_071594227.1 | F-type conjugal transfer protein TrbF | - |
| F7O57_RS25315 () | 57270..57611 | - | 342 | WP_071594226.1 | P-type conjugative transfer protein TrbJ | - |
| F7O57_RS25320 () | 57541..58086 | - | 546 | WP_000059832.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| F7O57_RS25325 () | 58073..58357 | - | 285 | WP_000623730.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| F7O57_RS25330 () | 58484..58822 | - | 339 | WP_001287905.1 | conjugal transfer protein TrbA | - |
| F7O57_RS25335 () | 58838..59581 | - | 744 | WP_001462109.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| F7O57_RS25340 () | 59574..59831 | - | 258 | WP_000864319.1 | conjugal transfer protein TrbE | - |
| F7O57_RS25345 () | 59858..61645 | - | 1788 | WP_029976537.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| F7O57_RS25350 () | 61956..62336 | - | 381 | WP_001462111.1 | hypothetical protein | - |
| F7O57_RS25355 () | 62333..62971 | - | 639 | WP_001463034.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| F7O57_RS25360 () | 62980..63285 | - | 306 | WP_000224412.1 | hypothetical protein | - |
| F7O57_RS25365 () | 63315..64307 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| F7O57_RS25370 () | 64304..64936 | - | 633 | WP_001203727.1 | type-F conjugative transfer system protein TraW | - |
| F7O57_RS25375 () | 64933..65319 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| F7O57_RS25380 () | 65316..67946 | - | 2631 | WP_087758006.1 | type IV secretion system protein TraC | - |
| F7O57_RS25385 () | 68111..68740 | - | 630 | Protein_67 | TraC family protein | - |
| F7O57_RS25390 () | 68866..69213 | - | 348 | WP_029702243.1 | hypothetical protein | - |
| F7O57_RS25395 () | 69241..69459 | - | 219 | WP_001377841.1 | hypothetical protein | - |
| F7O57_RS25400 () | 69538..70014 | - | 477 | WP_001744739.1 | hypothetical protein | - |
| F7O57_RS25405 () | 70007..70228 | - | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| F7O57_RS25410 () | 70363..70878 | - | 516 | WP_000809891.1 | type IV conjugative transfer system lipoprotein TraV | - |
| F7O57_RS25415 () | 70875..71126 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| F7O57_RS25420 () | 71119..71280 | - | 162 | WP_000741714.1 | conjugal transfer protein TrbD | - |
| F7O57_RS25425 () | 71302..71439 | - | 138 | WP_001553834.1 | conjugal transfer protein TrbD | - |
| F7O57_RS25430 () | 71426..72016 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| F7O57_RS25435 () | 72006..73433 | - | 1428 | WP_001553836.1 | conjugal transfer protein TraB | - |
| F7O57_RS25440 () | 73433..74137 | - | 705 | WP_148713163.1 | type-F conjugative transfer system secretin TraK | - |
| F7O57_RS25445 () | 74148..74714 | - | 567 | WP_029702255.1 | type IV conjugative transfer system protein TraE | - |
| F7O57_RS25450 () | 74736..75047 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| F7O57_RS25455 () | 75062..75427 | - | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| F7O57_RS25460 () | 75470..75685 | - | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| F7O57_RS25465 () | 75821..76468 | - | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| F7O57_RS25470 () | 76659..77042 | - | 384 | WP_001063020.1 | relaxosome protein TraM | - |
| F7O57_RS25475 () | 77412..77984 | + | 573 | WP_000949660.1 | hypothetical protein | VF |
| F7O57_RS25480 () | 78280..79101 | - | 822 | WP_001234465.1 | DUF945 domain-containing protein | - |
| F7O57_RS25485 () | 79220..79507 | - | 288 | WP_000107242.1 | hypothetical protein | - |
| F7O57_RS25490 () | 79532..79738 | - | 207 | WP_000275854.1 | hypothetical protein | - |
| F7O57_RS25495 () | 79740..79928 | - | 189 | WP_032147509.1 | hypothetical protein | - |
| F7O57_RS25500 () | 80406..80564 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 80629..80827 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 80629..80827 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 80629..80827 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 80629..80827 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| F7O57_RS25505 () | 80796..80901 | - | 106 | Protein_91 | plasmid SOS inhibition protein A | - |
| F7O57_RS25510 () | 81056..81373 | + | 318 | Protein_92 | IS110 family transposase | - |
| F7O57_RS25515 () | 81662..81913 | - | 252 | Protein_93 | iron-containing alcohol dehydrogenase | - |
| F7O57_RS25520 () | 81998..82621 | - | 624 | WP_000912556.1 | potassium channel family protein | - |
| F7O57_RS25525 () | 82637..83330 | - | 694 | Protein_95 | IS1 family transposase IS1A | Transposase |
| F7O57_RS25530 () | 83387..83491 | + | 105 | Protein_96 | thiosulfate reductase cytochrome B subunit | - |
| F7O57_RS25535 () | 83737..85131 | - | 1395 | WP_001037799.1 | carbohydrate porin | - |
| F7O57_RS25540 () | 85326..86756 | - | 1431 | WP_000813680.1 | glycoside hydrolase family 32 protein | - |
| F7O57_RS25545 () | 86756..88033 | - | 1278 | WP_001083369.1 | MFS transporter | - |
| F7O57_RS25550 () | 88096..90222 | - | 2127 | WP_000253905.1 | alpha-galactosidase | - |
| F7O57_RS25555 () | 90318..91328 | - | 1011 | WP_000053332.1 | substrate-binding domain-containing protein | - |
| F7O57_RS25560 () | 91486..92244 | - | 759 | Protein_102 | site-specific integrase | - |
| F7O57_RS25565 () | 92335..93563 | + | 1229 | WP_152924612.1 | IS3 family transposase IS2 | Transposase |
| F7O57_RS25570 () | 93548..94117 | + | 570 | WP_089634947.1 | hypothetical protein | - |
| F7O57_RS25575 () | 95218..95355 | - | 138 | WP_157663666.1 | hypothetical protein | - |
| F7O57_RS25580 () | 95496..96059 | - | 564 | WP_029702196.1 | class I SAM-dependent methyltransferase | - |
| F7O57_RS25585 () | 96107..97468 | - | 1362 | WP_039023242.1 | DUF3560 domain-containing protein | - |
| F7O57_RS25590 () | 97520..97750 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| F7O57_RS25595 () | 98267..98512 | + | 246 | WP_071817799.1 | hypothetical protein | - |
| F7O57_RS25600 () | 98779..98970 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| F7O57_RS25605 () | 98970..99431 | - | 462 | WP_051394489.1 | DUF1380 family protein | - |
| F7O57_RS25610 () | 99431..99733 | - | 303 | WP_001436678.1 | antirestriction protein | - |
| F7O57_RS25615 () | 99829..100400 | - | 572 | Protein_113 | DUF1472 domain-containing protein | - |
| F7O57_RS25620 () | 100285..101049 | - | 765 | Protein_114 | hypothetical protein | - |
| F7O57_RS25625 () | 101100..101534 | - | 435 | WP_029702191.1 | DUF1380 family protein | - |
| F7O57_RS25630 () | 101548..101769 | - | 222 | WP_001104867.1 | hypothetical protein | - |
| F7O57_RS25635 () | 101770..102453 | - | 684 | WP_000086148.1 | DNA methylase | - |
| F7O57_RS25640 () | 102529..102840 | - | 312 | WP_173023390.1 | hypothetical protein | - |
| F7O57_RS25645 () | 102837..103739 | - | 903 | WP_001507408.1 | DUF1281 domain-containing protein | - |
| F7O57_RS25650 () | 104606..105577 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| F7O57_RS25655 () | 105577..106743 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| F7O57_RS25660 () | 107331..108086 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| F7O57_RS25665 () | 108860..109666 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| F7O57_RS25670 () | 109667..109972 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | - |
| F7O57_RS25675 () | 109974..110192 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| F7O57_RS25680 () | 112514..113155 | + | 642 | WP_000990667.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|